RNA–Protein interactions for RNA: ENST00000397898.7

SUMO3-203, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 3 BASIC

Gene SUMO3, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-203ENST00000397898 OSCARQ8IYS5 282 aa24.7■■□□□ 1.54
SUMO3-203ENST00000397898 KIAA0586Q9BVV6 1533 aa24.65■■□□□ 1.54
SUMO3-203ENST00000397898 CTTNBP2Q8WZ74 1663 aa24.64■■□□□ 1.54
SUMO3-203ENST00000397898 TNIKQ9UKE5 1360 aa24.62■■□□□ 1.53
SUMO3-203ENST00000397898 CLASP1Q7Z460 1538 aa24.6■■□□□ 1.53
SUMO3-203ENST00000397898 IQGAP2Q13576 1575 aa24.6■■□□□ 1.53
SUMO3-203ENST00000397898 JPH4Q96JJ6 628 aa24.52■■□□□ 1.52
SUMO3-203ENST00000397898 RANGAP1P46060 587 aaPredicted RBP24.52■■□□□ 1.52
SUMO3-203ENST00000397898 SHROOM2Q13796 1616 aa24.48■■□□□ 1.51
SUMO3-203ENST00000397898 UGGT2Q9NYU1 1516 aa24.47■■□□□ 1.51
SUMO3-203ENST00000397898 CEP162Q5TB80 1403 aa24.44■■□□□ 1.5
SUMO3-203ENST00000397898 PRG4Q92954 1404 aaPredicted RBP24.42■■□□□ 1.5
SUMO3-203ENST00000397898 CLIP1P30622 1438 aa24.41■■□□□ 1.5
SUMO3-203ENST00000397898 DISP1Q96F81 1524 aa24.39■■□□□ 1.5
SUMO3-203ENST00000397898 SAMD9Q5K651 1589 aa24.38■■□□□ 1.49
SUMO3-203ENST00000397898 CARMIL2Q6F5E8 1435 aa24.37■■□□□ 1.49
SUMO3-203ENST00000397898 EFCAB5A4FU69 1503 aa24.37■■□□□ 1.49
SUMO3-203ENST00000397898 ARHGAP35Q9NRY4 1499 aa24.36■■□□□ 1.49
SUMO3-203ENST00000397898 KIAA0556O60303 1618 aa24.35■■□□□ 1.49
SUMO3-203ENST00000397898 P3H3Q8IVL6 736 aa24.35■■□□□ 1.49
SUMO3-203ENST00000397898 ERCC6L2Q5T890 1561 aa24.35■■□□□ 1.49
SUMO3-203ENST00000397898 FHOD3Q2V2M9 1422 aa24.29■■□□□ 1.48
SUMO3-203ENST00000397898 ARHGEF11O15085 1522 aa24.27■■□□□ 1.48
SUMO3-203ENST00000397898 ARAP1Q96P48 1450 aa24.26■■□□□ 1.47
SUMO3-203ENST00000397898 TTBK1Q5TCY1 1321 aaPredicted RBP24.23■■□□□ 1.47
SUMO3-203ENST00000397898 RIMBP3CA6NJZ7 1639 aa24.21■■□□□ 1.47
SUMO3-203ENST00000397898 RIMBP3BA6NNM3 1639 aa24.21■■□□□ 1.47
SUMO3-203ENST00000397898 RIMBP3Q9UFD9 1639 aa24.21■■□□□ 1.47
SUMO3-203ENST00000397898 PTPRGP23470 1445 aa24.2■■□□□ 1.46
SUMO3-203ENST00000397898 DNAJC5Q9H3Z4 198 aa24.18■■□□□ 1.46
SUMO3-203ENST00000397898 FMN1Q68DA7 1419 aa24.16■■□□□ 1.46
SUMO3-203ENST00000397898 VPS8Q8N3P4 1428 aa24.09■■□□□ 1.45
SUMO3-203ENST00000397898 PLB1Q6P1J6 1458 aa24.09■■□□□ 1.45
SUMO3-203ENST00000397898 CYB5RLQ6IPT4 315 aa24.06■■□□□ 1.44
SUMO3-203ENST00000397898 ABCA8O94911 1581 aa24.05■■□□□ 1.44
SUMO3-203ENST00000397898 UACAQ9BZF9 1416 aa24.05■■□□□ 1.44
SUMO3-203ENST00000397898 PCF11O94913 1555 aaKnown RBP24.03■■□□□ 1.44
SUMO3-203ENST00000397898 RAPGEF6Q8TEU7 1601 aa24.03■■□□□ 1.44
SUMO3-203ENST00000397898 CASKIN1Q8WXD9 1431 aa24.03■■□□□ 1.44
SUMO3-203ENST00000397898 ATP1B4Q9UN42 357 aaPredicted RBP24■■□□□ 1.43
SUMO3-203ENST00000397898 FYCO1Q9BQS8 1478 aa24■■□□□ 1.43
SUMO3-203ENST00000397898 ABCC2Q92887 1545 aa23.99■■□□□ 1.43
SUMO3-203ENST00000397898 UHRF1BP1LA0JNW5 1464 aa23.99■■□□□ 1.43
SUMO3-203ENST00000397898 NUP153P49790 1475 aaKnown RBP23.97■■□□□ 1.43
SUMO3-203ENST00000397898 HECW1Q76N89 1606 aa23.96■■□□□ 1.43
SUMO3-203ENST00000397898 ADCY10Q96PN6 1610 aa23.96■■□□□ 1.43
SUMO3-203ENST00000397898 ARID3CA6NKF2 412 aa23.93■■□□□ 1.42
SUMO3-203ENST00000397898 EPRSP07814 1512 aaKnown RBP23.9■■□□□ 1.42
SUMO3-203ENST00000397898 LRRIQ1Q96JM4 1722 aa23.88■■□□□ 1.41
SUMO3-203ENST00000397898 ATP10BO94823 1461 aa23.87■■□□□ 1.41
SUMO3-203ENST00000397898 KDM5BQ9UGL1 1544 aa23.87■■□□□ 1.41
SUMO3-203ENST00000397898 CCDC18Q5T9S5 1454 aa23.86■■□□□ 1.41
SUMO3-203ENST00000397898 CDK13Q14004 1512 aaKnown RBP23.86■■□□□ 1.41
SUMO3-203ENST00000397898 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.85■■□□□ 1.41
SUMO3-203ENST00000397898 HNRNPUL2Q1KMD3 747 aaKnown RBP23.85■■□□□ 1.41
SUMO3-203ENST00000397898 NPM1P06748 294 aaKnown RBP eCLIP23.83■■□□□ 1.41
SUMO3-203ENST00000397898 APLP2Q06481 763 aa23.83■■□□□ 1.41
SUMO3-203ENST00000397898 ZCCHC11Q5TAX3 1644 aaKnown RBP23.82■■□□□ 1.4
SUMO3-203ENST00000397898 TIAM1Q13009 1591 aa23.79■■□□□ 1.4
SUMO3-203ENST00000397898 MAP3K1Q13233 1512 aa23.79■■□□□ 1.4
SUMO3-203ENST00000397898 CFAP43Q8NDM7 1665 aa23.78■■□□□ 1.4
SUMO3-203ENST00000397898 CDK11AQ9UQ88 783 aaPredicted RBP23.75■■□□□ 1.39
SUMO3-203ENST00000397898 PLEKHD1A6NEE1 506 aa23.73■■□□□ 1.39
SUMO3-203ENST00000397898 KANK4Q5T7N3 995 aaPredicted RBP23.71■■□□□ 1.39
SUMO3-203ENST00000397898 MAGI3Q5TCQ9 1506 aa23.71■■□□□ 1.39
SUMO3-203ENST00000397898 ASXL2Q76L83 1435 aa23.7■■□□□ 1.38
SUMO3-203ENST00000397898 LRRC9Q6ZRR7 1453 aa23.7■■□□□ 1.38
SUMO3-203ENST00000397898 MTUS2Q5JR59 1369 aa23.69■■□□□ 1.38
SUMO3-203ENST00000397898 MAPKBP1O60336 1514 aa23.69■■□□□ 1.38
SUMO3-203ENST00000397898 TROQ12816 1431 aaPredicted RBP23.67■■□□□ 1.38
SUMO3-203ENST00000397898 WDR7Q9Y4E6 1490 aa23.67■■□□□ 1.38
SUMO3-203ENST00000397898 PPARGC1BQ86YN6 1023 aaKnown RBP23.65■■□□□ 1.38
SUMO3-203ENST00000397898 EHBP1L1Q8N3D4 1523 aa23.65■■□□□ 1.38
SUMO3-203ENST00000397898 KCNH8Q96L42 1107 aa23.61■■□□□ 1.37
SUMO3-203ENST00000397898 KIF14Q15058 1648 aa23.57■■□□□ 1.36
SUMO3-203ENST00000397898 SUPT6HQ7KZ85 1726 aaKnown RBP23.55■■□□□ 1.36
SUMO3-203ENST00000397898 NCOA2Q15596 1464 aa23.53■■□□□ 1.36
SUMO3-203ENST00000397898 ABCC10Q5T3U5 1492 aa23.52■■□□□ 1.36
SUMO3-203ENST00000397898 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.51■■□□□ 1.352e-6■■■□□ 14.8
SUMO3-203ENST00000397898 DIP2BQ9P265 1576 aa23.49■■□□□ 1.35
SUMO3-203ENST00000397898 TTC37Q6PGP7 1564 aa23.47■■□□□ 1.35
SUMO3-203ENST00000397898 FAM69CQ0P6D2 419 aa23.47■■□□□ 1.35
SUMO3-203ENST00000397898 ABCA9Q8IUA7 1624 aa23.46■■□□□ 1.35
SUMO3-203ENST00000397898 GLI2P10070 1586 aa23.46■■□□□ 1.35
SUMO3-203ENST00000397898 PHLDB1Q86UU1 1377 aa23.45■■□□□ 1.34
SUMO3-203ENST00000397898 CCNB3Q8WWL7 1395 aa23.45■■□□□ 1.34
SUMO3-203ENST00000397898 GPATCH8Q9UKJ3 1502 aaKnown RBP23.42■■□□□ 1.34
SUMO3-203ENST00000397898 CD109Q6YHK3 1445 aa23.4■■□□□ 1.34
SUMO3-203ENST00000397898 KIF13AQ9H1H9 1805 aa23.4■■□□□ 1.34
SUMO3-203ENST00000397898 MYOM3Q5VTT5 1437 aa23.39■■□□□ 1.34
SUMO3-203ENST00000397898 MAP3K4Q9Y6R4 1608 aa23.38■■□□□ 1.33
SUMO3-203ENST00000397898 CDC42BPAQ5VT25 1732 aa23.38■■□□□ 1.33
SUMO3-203ENST00000397898 PLCH2O75038 1416 aa23.38■■□□□ 1.33
SUMO3-203ENST00000397898 MYO5CQ9NQX4 1742 aa23.38■■□□□ 1.33
SUMO3-203ENST00000397898 TRHP20396 242 aaPredicted RBP23.37■■□□□ 1.33
SUMO3-203ENST00000397898 ITSN2Q9NZM3 1697 aa23.36■■□□□ 1.33
SUMO3-203ENST00000397898 PREX2Q70Z35 1606 aa23.36■■□□□ 1.33
SUMO3-203ENST00000397898 CFDP1Q9UEE9 299 aaPredicted RBP23.35■■□□□ 1.33
SUMO3-203ENST00000397898 CDC42BPBQ9Y5S2 1711 aa23.33■■□□□ 1.33
SUMO3-203ENST00000397898 ARHGAP5Q13017 1502 aa23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms