RNA–Protein interactions for RNA: ENST00000397799.1

COL8A2-202, Transcript of collagen type VIII alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL8A2, Length 4,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2-202ENST00000397799 STAG3Q9UJ98 1225 aa23.62■■□□□ 1.37
COL8A2-202ENST00000397799 ACIN1Q9UKV3 1341 aaKnown RBP23.59■■□□□ 1.37
COL8A2-202ENST00000397799 VPS8Q8N3P4 1428 aa23.54■■□□□ 1.36
COL8A2-202ENST00000397799 CARMIL2Q6F5E8 1435 aa23.53■■□□□ 1.36
COL8A2-202ENST00000397799 RAPGEF2Q9Y4G8 1499 aa23.5■■□□□ 1.35
COL8A2-202ENST00000397799 CCNB3Q8WWL7 1395 aa23.47■■□□□ 1.35
COL8A2-202ENST00000397799 FMN1Q68DA7 1419 aa23.43■■□□□ 1.34
COL8A2-202ENST00000397799 PLPPR3Q6T4P5 718 aa23.42■■□□□ 1.34
COL8A2-202ENST00000397799 KDM2AQ9Y2K7 1162 aa23.4■■□□□ 1.34
COL8A2-202ENST00000397799 RUSC2Q8N2Y8 1516 aa23.34■■□□□ 1.33
COL8A2-202ENST00000397799 FGD5Q6ZNL6 1462 aa23.33■■□□□ 1.33
COL8A2-202ENST00000397799 DDX10Q13206 875 aaKnown RBP23.32■■□□□ 1.32
COL8A2-202ENST00000397799 KANK4Q5T7N3 995 aaPredicted RBP23.3■■□□□ 1.32
COL8A2-202ENST00000397799 NEFMP07197 916 aa23.3■■□□□ 1.32
COL8A2-202ENST00000397799 JPH4Q96JJ6 628 aa23.29■■□□□ 1.32
COL8A2-202ENST00000397799 HMGXB3Q12766 1538 aa23.28■■□□□ 1.32
COL8A2-202ENST00000397799 ARHGAP35Q9NRY4 1499 aa23.28■■□□□ 1.32
COL8A2-202ENST00000397799 CFTRP13569 1480 aa23.27■■□□□ 1.32
COL8A2-202ENST00000397799 CC2D2AQ9P2K1 1620 aa23.27■■□□□ 1.32
COL8A2-202ENST00000397799 BICRAQ9NZM4 1560 aa23.26■■□□□ 1.31
COL8A2-202ENST00000397799 FHOD3Q2V2M9 1422 aa23.25■■□□□ 1.31
COL8A2-202ENST00000397799 EIF4G2P78344 907 aaKnown RBP eCLIP23.24■■□□□ 1.31
COL8A2-202ENST00000397799 GAPVD1Q14C86 1478 aa23.23■■□□□ 1.31
COL8A2-202ENST00000397799 IGF1RP08069 1367 aa23.23■■□□□ 1.31
COL8A2-202ENST00000397799 RAD54L2Q9Y4B4 1467 aa23.21■■□□□ 1.31
COL8A2-202ENST00000397799 RGL3Q3MIN7 710 aa23.2■■□□□ 1.3
COL8A2-202ENST00000397799 CLSPNQ9HAW4 1339 aa23.2■■□□□ 1.3
COL8A2-202ENST00000397799 DAXXQ9UER7 740 aaPredicted RBP23.19■■□□□ 1.3
COL8A2-202ENST00000397799 ARID4BQ4LE39 1312 aaPredicted RBP23.18■■□□□ 1.3
COL8A2-202ENST00000397799 PPP1R15AO75807 674 aaPredicted RBP23.13■■□□□ 1.29
COL8A2-202ENST00000397799 EFCAB2Q5VUJ9 269 aa23.12■■□□□ 1.29
COL8A2-202ENST00000397799 HIRIP3Q9BW71 556 aaPredicted RBP23.11■■□□□ 1.29
COL8A2-202ENST00000397799 NESP48681 1621 aa23.1■■□□□ 1.29
COL8A2-202ENST00000397799 SETD5Q9C0A6 1442 aa23.09■■□□□ 1.29
COL8A2-202ENST00000397799 SIN3AQ96ST3 1273 aa23.08■■□□□ 1.29
COL8A2-202ENST00000397799 GTF3C3Q9Y5Q9 886 aa23.05■■□□□ 1.28
COL8A2-202ENST00000397799 TMC1Q8TDI8 760 aa23.04■■□□□ 1.28
COL8A2-202ENST00000397799 CCDC18Q5T9S5 1454 aa23.04■■□□□ 1.28
COL8A2-202ENST00000397799 KANK1Q14678 1352 aa23.04■■□□□ 1.28
COL8A2-202ENST00000397799 SLC24A1O60721 1099 aa23.03■■□□□ 1.28
COL8A2-202ENST00000397799 AQRO60306 1485 aaKnown RBP eCLIP23.03■■□□□ 1.28
COL8A2-202ENST00000397799 CANXP27824 592 aaKnown RBP23.03■■□□□ 1.28
COL8A2-202ENST00000397799 TRHP20396 242 aaPredicted RBP23.02■■□□□ 1.28
COL8A2-202ENST00000397799 FAM9BQ8IZU0 186 aa23.02■■□□□ 1.28
COL8A2-202ENST00000397799 PTPRGP23470 1445 aa23.02■■□□□ 1.28
COL8A2-202ENST00000397799 MYT1Q01538 1121 aa23■■□□□ 1.27
COL8A2-202ENST00000397799 HNRNPUQ00839 825 aaKnown RBP eCLIP23■■□□□ 1.27
COL8A2-202ENST00000397799 TIMELESSQ9UNS1 1208 aa23■■□□□ 1.27
COL8A2-202ENST00000397799 CARD11Q9BXL7 1154 aa22.99■■□□□ 1.27
COL8A2-202ENST00000397799 MRC2Q9UBG0 1479 aa22.99■■□□□ 1.27
COL8A2-202ENST00000397799 OSCARQ8IYS5 282 aa22.99■■□□□ 1.27
COL8A2-202ENST00000397799 SYNJ1O43426 1573 aa22.98■■□□□ 1.27
COL8A2-202ENST00000397799 SENP3Q9H4L4 574 aaPredicted RBP22.97■■□□□ 1.27
COL8A2-202ENST00000397799 ANKRD30AQ9BXX3 1397 aa22.96■■□□□ 1.27
COL8A2-202ENST00000397799 GRIN2BQ13224 1484 aa22.96■■□□□ 1.27
COL8A2-202ENST00000397799 RSPH4AQ5TD94 716 aa22.96■■□□□ 1.27
COL8A2-202ENST00000397799 MRS2Q9HD23 443 aa22.95■■□□□ 1.26
COL8A2-202ENST00000397799 CDCA8Q53HL2 280 aa22.95■■□□□ 1.26
COL8A2-202ENST00000397799 TOPBP1Q92547 1522 aa22.93■■□□□ 1.26
COL8A2-202ENST00000397799 ZBTB47Q9UFB7 747 aaPredicted RBP22.92■■□□□ 1.26
COL8A2-202ENST00000397799 RAB3GAP2Q9H2M9 1393 aa22.91■■□□□ 1.26
COL8A2-202ENST00000397799 PKD2Q13563 968 aa22.9■■□□□ 1.26
COL8A2-202ENST00000397799 WDR43Q15061 677 aaKnown RBP eCLIP22.9■■□□□ 1.26
COL8A2-202ENST00000397799 GGT6Q6P531 493 aa22.9■■□□□ 1.26
COL8A2-202ENST00000397799 TOP2BQ02880 1626 aa22.89■■□□□ 1.26
COL8A2-202ENST00000397799 MIER1Q8N108 512 aa22.89■■□□□ 1.25
COL8A2-202ENST00000397799 HNRNPMP52272 730 aaKnown RBP eCLIP22.88■■□□□ 1.25
COL8A2-202ENST00000397799 CUX1P39880 1505 aa22.88■■□□□ 1.25
COL8A2-202ENST00000397799 IFT140Q96RY7 1462 aa22.88■■□□□ 1.25
COL8A2-202ENST00000397799 DCAF11Q8TEB1 546 aa22.87■■□□□ 1.25
COL8A2-202ENST00000397799 POLA1P09884 1462 aaPredicted RBP22.86■■□□□ 1.25
COL8A2-202ENST00000397799 MLECQ14165 292 aa22.86■■□□□ 1.25
COL8A2-202ENST00000397799 NUP155O75694 1391 aa22.85■■□□□ 1.25
COL8A2-202ENST00000397799 MPHOSPH9Q99550 1183 aa22.84■■□□□ 1.25
COL8A2-202ENST00000397799 ERICH3Q5RHP9 1530 aa22.84■■□□□ 1.25
COL8A2-202ENST00000397799 PEG3Q9GZU2 1588 aa22.84■■□□□ 1.25
COL8A2-202ENST00000397799 UNC13AQ9UPW8 1703 aa22.84■■□□□ 1.25
COL8A2-202ENST00000397799 SALL2Q9Y467 1007 aaPredicted RBP22.82■■□□□ 1.24
COL8A2-202ENST00000397799 SPAG9O60271 1321 aaKnown RBP22.82■■□□□ 1.24
COL8A2-202ENST00000397799 KIF21BO75037 1637 aa22.82■■□□□ 1.24
COL8A2-202ENST00000397799 DNMBPQ6XZF7 1577 aa22.8■■□□□ 1.24
COL8A2-202ENST00000397799 DNAJC5BQ9UF47 199 aa22.8■■□□□ 1.24
COL8A2-202ENST00000397799 C14orf37Q86TY3 774 aa22.79■■□□□ 1.24
COL8A2-202ENST00000397799 LAMC3Q9Y6N6 1575 aa22.79■■□□□ 1.24
COL8A2-202ENST00000397799 FOXD1Q16676 465 aa22.77■■□□□ 1.24
COL8A2-202ENST00000397799 CYB5RLQ6IPT4 315 aa22.77■■□□□ 1.24
COL8A2-202ENST00000397799 KNSTRNQ9Y448 316 aa22.77■■□□□ 1.24
COL8A2-202ENST00000397799 KIF3BO15066 747 aa22.76■■□□□ 1.23
COL8A2-202ENST00000397799 POGKQ9P215 609 aa22.76■■□□□ 1.23
COL8A2-202ENST00000397799 HDGFP51858 240 aaKnown RBP22.76■■□□□ 1.23
COL8A2-202ENST00000397799 PRXQ9BXM0 1461 aa22.75■■□□□ 1.23
COL8A2-202ENST00000397799 FKBP8Q14318 412 aa22.67■■□□□ 1.22
COL8A2-202ENST00000397799 CASKIN1Q8WXD9 1431 aa22.67■■□□□ 1.22
COL8A2-202ENST00000397799 TMF1P82094 1093 aa22.67■■□□□ 1.22
COL8A2-202ENST00000397799 SCAF1Q9H7N4 1312 aaKnown RBP22.66■■□□□ 1.22
COL8A2-202ENST00000397799 CFAP53Q96M91 514 aa22.66■■□□□ 1.22
COL8A2-202ENST00000397799 BCL11AQ9H165 835 aa22.63■■□□□ 1.21
COL8A2-202ENST00000397799 ABCA10Q8WWZ4 1543 aa22.63■■□□□ 1.21
COL8A2-202ENST00000397799 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.63■■□□□ 1.21
COL8A2-202ENST00000397799 SNAPC4Q5SXM2 1469 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms