RNA–Protein interactions for RNA: ENST00000397647.7

PAX8-204, Transcript of paired box 8, humanhuman

TSL 1 (best) BASIC

Gene PAX8, Length 3,633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX8-204ENST00000397647 ANP32CO43423 234 aa19.18■□□□□ 0.66
PAX8-204ENST00000397647 ARHGAP35Q9NRY4 1499 aa19.18■□□□□ 0.66
PAX8-204ENST00000397647 MSH5O43196 834 aa19.15■□□□□ 0.66
PAX8-204ENST00000397647 PEG3Q9GZU2 1588 aa19.14■□□□□ 0.65
PAX8-204ENST00000397647 SETD5Q9C0A6 1442 aa19.13■□□□□ 0.65
PAX8-204ENST00000397647 PHLDB1Q86UU1 1377 aa19.12■□□□□ 0.65
PAX8-204ENST00000397647 KIF27Q86VH2 1401 aa19.11■□□□□ 0.65
PAX8-204ENST00000397647 ERICH3Q5RHP9 1530 aa19.1■□□□□ 0.65
PAX8-204ENST00000397647 CUX2O14529 1486 aa19.1■□□□□ 0.65
PAX8-204ENST00000397647 HNRNPUQ00839 825 aaKnown RBP eCLIP19.07■□□□□ 0.64
PAX8-204ENST00000397647 CUX1P39880 1505 aa19.07■□□□□ 0.64
PAX8-204ENST00000397647 BIVM-ERCC5R4GMW8 1640 aa18.99■□□□□ 0.63
PAX8-204ENST00000397647 CNGB1Q14028 1251 aaPredicted RBP18.99■□□□□ 0.63
PAX8-204ENST00000397647 CCER2I3L3R5 266 aa18.99■□□□□ 0.63
PAX8-204ENST00000397647 IGF1RP08069 1367 aa18.96■□□□□ 0.63
PAX8-204ENST00000397647 TONSLQ96HA7 1378 aa18.96■□□□□ 0.63
PAX8-204ENST00000397647 LRRC9Q6ZRR7 1453 aa18.95■□□□□ 0.62
PAX8-204ENST00000397647 ERICH6Q7L0X2 663 aa18.95■□□□□ 0.62
PAX8-204ENST00000397647 SENP3-EIF4A1A0A087X0R7 540 aa18.94■□□□□ 0.62
PAX8-204ENST00000397647 CCDC184Q52MB2 194 aa18.93■□□□□ 0.62
PAX8-204ENST00000397647 CDK11AQ9UQ88 783 aaPredicted RBP18.93■□□□□ 0.62
PAX8-204ENST00000397647 TIAM1Q13009 1591 aa18.93■□□□□ 0.62
PAX8-204ENST00000397647 CARMIL1Q5VZK9 1371 aa18.91■□□□□ 0.62
PAX8-204ENST00000397647 FAM9BQ8IZU0 186 aa18.88■□□□□ 0.61
PAX8-204ENST00000397647 B4GALNT3Q6L9W6 998 aa18.88■□□□□ 0.61
PAX8-204ENST00000397647 FHOD3Q2V2M9 1422 aa18.87■□□□□ 0.61
PAX8-204ENST00000397647 CHIC2Q9UKJ5 165 aa18.86■□□□□ 0.61
PAX8-204ENST00000397647 TIMELESSQ9UNS1 1208 aa18.82■□□□□ 0.6
PAX8-204ENST00000397647 RRP7BPQ9NSQ0 103 aa18.82■□□□□ 0.6
PAX8-204ENST00000397647 HSPA5P11021 654 aaKnown RBP18.81■□□□□ 0.6
PAX8-204ENST00000397647 WASHC2AQ641Q2 1341 aa18.8■□□□□ 0.6
PAX8-204ENST00000397647 FOXD1Q16676 465 aa18.8■□□□□ 0.6
PAX8-204ENST00000397647 NBR1Q14596 966 aa18.78■□□□□ 0.6
PAX8-204ENST00000397647 PTPRKQ15262 1439 aa18.77■□□□□ 0.6
PAX8-204ENST00000397647 PCF11O94913 1555 aaKnown RBP18.76■□□□□ 0.59
PAX8-204ENST00000397647 ARID3CA6NKF2 412 aa18.76■□□□□ 0.59
PAX8-204ENST00000397647 FANCIQ9NVI1 1328 aa18.75■□□□□ 0.59
PAX8-204ENST00000397647 C11orf95C9JLR9 678 aaPredicted RBP18.75■□□□□ 0.59
PAX8-204ENST00000397647 CFTRP13569 1480 aa18.74■□□□□ 0.59
PAX8-204ENST00000397647 AQRO60306 1485 aaKnown RBP eCLIP18.74■□□□□ 0.59
PAX8-204ENST00000397647 FHAD1B1AJZ9 1412 aa18.73■□□□□ 0.59
PAX8-204ENST00000397647 CCDC18Q5T9S5 1454 aa18.73■□□□□ 0.59
PAX8-204ENST00000397647 MRS2Q9HD23 443 aa18.72■□□□□ 0.59
PAX8-204ENST00000397647 POLR3GLQ9BT43 218 aa18.71■□□□□ 0.59
PAX8-204ENST00000397647 PPP4R2Q9NY27 417 aa18.71■□□□□ 0.59
PAX8-204ENST00000397647 MTUS2Q5JR59 1369 aa18.7■□□□□ 0.58
PAX8-204ENST00000397647 FGD5Q6ZNL6 1462 aa18.7■□□□□ 0.58
PAX8-204ENST00000397647 MAP3K1Q13233 1512 aa18.68■□□□□ 0.58
PAX8-204ENST00000397647 NCAPD3P42695 1498 aa18.68■□□□□ 0.58
PAX8-204ENST00000397647 DEKP35659 375 aaKnown RBP18.68■□□□□ 0.58
PAX8-204ENST00000397647 PAK3O75914 559 aaPredicted RBP18.67■□□□□ 0.58
PAX8-204ENST00000397647 FGD6Q6ZV73 1430 aa18.67■□□□□ 0.58
PAX8-204ENST00000397647 EIF4G2P78344 907 aaKnown RBP eCLIP18.66■□□□□ 0.58
PAX8-204ENST00000397647 RAD54L2Q9Y4B4 1467 aa18.64■□□□□ 0.58
PAX8-204ENST00000397647 L3MBTL2Q969R5 705 aa18.63■□□□□ 0.57
PAX8-204ENST00000397647 UACAQ9BZF9 1416 aa18.63■□□□□ 0.57
PAX8-204ENST00000397647 PRKRIP1Q9H875 184 aaPredicted RBP18.62■□□□□ 0.57
PAX8-204ENST00000397647 NAIPQ13075 1403 aa18.6■□□□□ 0.57
PAX8-204ENST00000397647 HFM1A2PYH4 1435 aa18.58■□□□□ 0.56
PAX8-204ENST00000397647 CFAP43Q8NDM7 1665 aa18.58■□□□□ 0.56
PAX8-204ENST00000397647 CASKIN1Q8WXD9 1431 aa18.56■□□□□ 0.56
PAX8-204ENST00000397647 HMGXB3Q12766 1538 aa18.56■□□□□ 0.56
PAX8-204ENST00000397647 ZNF326Q5BKZ1 582 aaKnown RBP18.55■□□□□ 0.56
PAX8-204ENST00000397647 CADPSQ9ULU8 1353 aa18.55■□□□□ 0.56
PAX8-204ENST00000397647 NBPF8Q3BBV2 869 aa18.55■□□□□ 0.56
PAX8-204ENST00000397647 NOP58Q9Y2X3 529 aaKnown RBP18.54■□□□□ 0.56
PAX8-204ENST00000397647 PTPN23Q9H3S7 1636 aa18.54■□□□□ 0.56
PAX8-204ENST00000397647 KDM5BQ9UGL1 1544 aa18.54■□□□□ 0.56
PAX8-204ENST00000397647 MPHOSPH9Q99550 1183 aa18.54■□□□□ 0.56
PAX8-204ENST00000397647 AKNAQ7Z591 1439 aa18.53■□□□□ 0.56
PAX8-204ENST00000397647 FYCO1Q9BQS8 1478 aa18.53■□□□□ 0.56
PAX8-204ENST00000397647 NCOA2Q15596 1464 aa18.5■□□□□ 0.55
PAX8-204ENST00000397647 FMN1Q68DA7 1419 aa18.5■□□□□ 0.55
PAX8-204ENST00000397647 CNTLNQ9NXG0 1405 aa18.5■□□□□ 0.55
PAX8-204ENST00000397647 CCDC136Q96JN2 1154 aa18.5■□□□□ 0.55
PAX8-204ENST00000397647 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.49■□□□□ 0.55
PAX8-204ENST00000397647 SALL2Q9Y467 1007 aaPredicted RBP18.49■□□□□ 0.55
PAX8-204ENST00000397647 ZBED9Q6R2W3 1325 aa18.49■□□□□ 0.55
PAX8-204ENST00000397647 CCDC7Q96M83 1385 aa18.49■□□□□ 0.55
PAX8-204ENST00000397647 NPM2Q86SE8 214 aaKnown RBP18.48■□□□□ 0.55
PAX8-204ENST00000397647 KIF7Q2M1P5 1343 aa18.47■□□□□ 0.55
PAX8-204ENST00000397647 TDRD9Q8NDG6 1382 aaKnown RBP18.47■□□□□ 0.55
PAX8-204ENST00000397647 MYOM3Q5VTT5 1437 aa18.46■□□□□ 0.55
PAX8-204ENST00000397647 DENND4BO75064 1496 aaPredicted RBP18.45■□□□□ 0.54
PAX8-204ENST00000397647 ERICH6BQ5W0A0 696 aa18.45■□□□□ 0.54
PAX8-204ENST00000397647 KDM6BO15054 1643 aa18.43■□□□□ 0.54
PAX8-204ENST00000397647 SNAPC4Q5SXM2 1469 aa18.42■□□□□ 0.54
PAX8-204ENST00000397647 FANCD2Q9BXW9 1451 aa18.41■□□□□ 0.54
PAX8-204ENST00000397647 RTN4Q9NQC3 1192 aaKnown RBP18.4■□□□□ 0.54
PAX8-204ENST00000397647 SLC4A1APQ9BWU0 796 aaKnown RBP18.4■□□□□ 0.54
PAX8-204ENST00000397647 ZNF644Q9H582 1327 aaPredicted RBP18.39■□□□□ 0.53
PAX8-204ENST00000397647 NCOA1Q15788 1441 aa18.38■□□□□ 0.53
PAX8-204ENST00000397647 ANP32AP39687 249 aaKnown RBP18.38■□□□□ 0.53
PAX8-204ENST00000397647 ZBTB47Q9UFB7 747 aaPredicted RBP18.37■□□□□ 0.53
PAX8-204ENST00000397647 POLA1P09884 1462 aaPredicted RBP18.37■□□□□ 0.53
PAX8-204ENST00000397647 NESP48681 1621 aa18.36■□□□□ 0.53
PAX8-204ENST00000397647 IPO9Q96P70 1041 aaKnown RBP18.35■□□□□ 0.53
PAX8-204ENST00000397647 LRRIQ1Q96JM4 1722 aa18.35■□□□□ 0.53
PAX8-204ENST00000397647 LAS1LQ9Y4W2 734 aaKnown RBP18.35■□□□□ 0.53
PAX8-204ENST00000397647 NUDCQ9Y266 331 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms