RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 AKNAQ7Z591 1439 aa7.73□□□□□ -1.17
PTPRD-205ENST00000397611 SETD5Q9C0A6 1442 aa7.73□□□□□ -1.17
PTPRD-205ENST00000397611 ABCA10Q8WWZ4 1543 aa7.73□□□□□ -1.17
PTPRD-205ENST00000397611 MIER1Q8N108 512 aa7.73□□□□□ -1.17
PTPRD-205ENST00000397611 CASKIN1Q8WXD9 1431 aa7.71□□□□□ -1.17
PTPRD-205ENST00000397611 CCER2I3L3R5 266 aa7.71□□□□□ -1.18
PTPRD-205ENST00000397611 TIAM1Q13009 1591 aa7.71□□□□□ -1.18
PTPRD-205ENST00000397611 LRRC9Q6ZRR7 1453 aa7.71□□□□□ -1.18
PTPRD-205ENST00000397611 FYCO1Q9BQS8 1478 aa7.71□□□□□ -1.18
PTPRD-205ENST00000397611 FGD5Q6ZNL6 1462 aa7.7□□□□□ -1.18
PTPRD-205ENST00000397611 KANK4Q5T7N3 995 aaPredicted RBP7.7□□□□□ -1.18
PTPRD-205ENST00000397611 DAXXQ9UER7 740 aaPredicted RBP7.68□□□□□ -1.18
PTPRD-205ENST00000397611 RAB3GAP2Q9H2M9 1393 aa7.68□□□□□ -1.18
PTPRD-205ENST00000397611 CCDC18Q5T9S5 1454 aa7.67□□□□□ -1.18
PTPRD-205ENST00000397611 THOC2Q8NI27 1593 aaKnown RBP7.67□□□□□ -1.18
PTPRD-205ENST00000397611 HFM1A2PYH4 1435 aa7.67□□□□□ -1.18
PTPRD-205ENST00000397611 ERICH6BQ5W0A0 696 aa7.67□□□□□ -1.18
PTPRD-205ENST00000397611 PPP1R15AO75807 674 aaPredicted RBP7.65□□□□□ -1.18
PTPRD-205ENST00000397611 DNMBPQ6XZF7 1577 aa7.65□□□□□ -1.19
PTPRD-205ENST00000397611 ITGAEP38570 1179 aa7.65□□□□□ -1.19
PTPRD-205ENST00000397611 UACAQ9BZF9 1416 aa7.64□□□□□ -1.19
PTPRD-205ENST00000397611 PHLDB1Q86UU1 1377 aa7.64□□□□□ -1.19
PTPRD-205ENST00000397611 FANCD2Q9BXW9 1451 aa7.64□□□□□ -1.19
PTPRD-205ENST00000397611 CC2D2AQ9P2K1 1620 aa7.63□□□□□ -1.19
PTPRD-205ENST00000397611 ATP1B4Q9UN42 357 aaPredicted RBP7.63□□□□□ -1.19
PTPRD-205ENST00000397611 FGD6Q6ZV73 1430 aa7.63□□□□□ -1.19
PTPRD-205ENST00000397611 BCL11AQ9H165 835 aa7.63□□□□□ -1.19
PTPRD-205ENST00000397611 CDK11AQ9UQ88 783 aaPredicted RBP7.63□□□□□ -1.19
PTPRD-205ENST00000397611 ANP32EQ9BTT0 268 aa7.62□□□□□ -1.19
PTPRD-205ENST00000397611 MIA2Q96PC5 1412 aa7.62□□□□□ -1.19
PTPRD-205ENST00000397611 PDS5BQ9NTI5 1447 aa7.62□□□□□ -1.19
PTPRD-205ENST00000397611 POLA1P09884 1462 aaPredicted RBP7.61□□□□□ -1.19
PTPRD-205ENST00000397611 MTUS2Q5JR59 1369 aa7.61□□□□□ -1.19
PTPRD-205ENST00000397611 MAPKBP1O60336 1514 aa7.61□□□□□ -1.19
PTPRD-205ENST00000397611 MYOM3Q5VTT5 1437 aa7.61□□□□□ -1.19
PTPRD-205ENST00000397611 TOPBP1Q92547 1522 aa7.61□□□□□ -1.19
PTPRD-205ENST00000397611 CUL7Q14999 1698 aa7.6□□□□□ -1.19
PTPRD-205ENST00000397611 EIF5BO60841 1220 aaKnown RBP7.6□□□□□ -1.19
PTPRD-205ENST00000397611 CNGB1Q14028 1251 aaPredicted RBP7.6□□□□□ -1.19
PTPRD-205ENST00000397611 TONSLQ96HA7 1378 aa7.59□□□□□ -1.19
PTPRD-205ENST00000397611 FKBP8Q14318 412 aa7.59□□□□□ -1.19
PTPRD-205ENST00000397611 LAMC3Q9Y6N6 1575 aa7.58□□□□□ -1.2
PTPRD-205ENST00000397611 SNAPC4Q5SXM2 1469 aa7.56□□□□□ -1.2
PTPRD-205ENST00000397611 POLR3GLQ9BT43 218 aa7.56□□□□□ -1.2
PTPRD-205ENST00000397611 NAIPQ13075 1403 aa7.56□□□□□ -1.2
PTPRD-205ENST00000397611 SUPT16HQ9Y5B9 1047 aaKnown RBP7.56□□□□□ -1.2
PTPRD-205ENST00000397611 CFAP43Q8NDM7 1665 aa7.56□□□□□ -1.2
PTPRD-205ENST00000397611 ROCK1Q13464 1354 aa7.56□□□□□ -1.2
PTPRD-205ENST00000397611 ANP32CO43423 234 aa7.55□□□□□ -1.2
PTPRD-205ENST00000397611 PRDM2Q13029 1718 aa7.55□□□□□ -1.2
PTPRD-205ENST00000397611 TCOF1Q13428 1488 aaKnown RBP7.55□□□□□ -1.2
PTPRD-205ENST00000397611 EHBP1L1Q8N3D4 1523 aa7.55□□□□□ -1.2
PTPRD-205ENST00000397611 ARHGEF11O15085 1522 aa7.54□□□□□ -1.2
PTPRD-205ENST00000397611 FHOD3Q2V2M9 1422 aa7.54□□□□□ -1.2
PTPRD-205ENST00000397611 ARID4BQ4LE39 1312 aaPredicted RBP7.53□□□□□ -1.2
PTPRD-205ENST00000397611 GRIN2BQ13224 1484 aa7.53□□□□□ -1.2
PTPRD-205ENST00000397611 NBR1Q14596 966 aa7.53□□□□□ -1.2
PTPRD-205ENST00000397611 GAPVD1Q14C86 1478 aa7.53□□□□□ -1.2
PTPRD-205ENST00000397611 SAMD9Q5K651 1589 aa7.52□□□□□ -1.21
PTPRD-205ENST00000397611 NCOA2Q15596 1464 aa7.52□□□□□ -1.21
PTPRD-205ENST00000397611 FAM50AQ14320 339 aaKnown RBP7.51□□□□□ -1.21
PTPRD-205ENST00000397611 MYT1LQ9UL68 1186 aa7.51□□□□□ -1.21
PTPRD-205ENST00000397611 PCF11O94913 1555 aaKnown RBP7.51□□□□□ -1.21
PTPRD-205ENST00000397611 WDR97A6NE52 1622 aa7.5□□□□□ -1.21
PTPRD-205ENST00000397611 ANP32AP39687 249 aaKnown RBP7.49□□□□□ -1.21
PTPRD-205ENST00000397611 NPM2Q86SE8 214 aaKnown RBP7.49□□□□□ -1.21
PTPRD-205ENST00000397611 EIF4G2P78344 907 aaKnown RBP eCLIP7.48□□□□□ -1.21
PTPRD-205ENST00000397611 KIAA0586Q9BVV6 1533 aa7.48□□□□□ -1.21
PTPRD-205ENST00000397611 UGGT2Q9NYU1 1516 aa7.47□□□□□ -1.21
PTPRD-205ENST00000397611 ABCA5Q8WWZ7 1642 aa7.47□□□□□ -1.21
PTPRD-205ENST00000397611 RAD54L2Q9Y4B4 1467 aa7.47□□□□□ -1.21
PTPRD-205ENST00000397611 DDX10Q13206 875 aaKnown RBP7.47□□□□□ -1.21
PTPRD-205ENST00000397611 KTN1Q86UP2 1357 aaKnown RBP7.46□□□□□ -1.21
PTPRD-205ENST00000397611 URB2Q14146 1524 aaKnown RBP7.46□□□□□ -1.22
PTPRD-205ENST00000397611 ROCK2O75116 1388 aaKnown RBP7.46□□□□□ -1.22
PTPRD-205ENST00000397611 TDRD9Q8NDG6 1382 aaKnown RBP7.46□□□□□ -1.22
PTPRD-205ENST00000397611 PTPN23Q9H3S7 1636 aa7.45□□□□□ -1.22
PTPRD-205ENST00000397611 SIN3AQ96ST3 1273 aa7.45□□□□□ -1.22
PTPRD-205ENST00000397611 TSHZ2Q9NRE2 1034 aa7.45□□□□□ -1.22
PTPRD-205ENST00000397611 RPRD2Q5VT52 1461 aaKnown RBP7.45□□□□□ -1.22
PTPRD-205ENST00000397611 KIF21AQ7Z4S6 1674 aa7.45□□□□□ -1.22
PTPRD-205ENST00000397611 EPRSP07814 1512 aaKnown RBP7.44□□□□□ -1.22
PTPRD-205ENST00000397611 PTPRKQ15262 1439 aa7.44□□□□□ -1.22
PTPRD-205ENST00000397611 HECW1Q76N89 1606 aa7.43□□□□□ -1.22
PTPRD-205ENST00000397611 ANKRD30BQ9BXX2 1392 aa7.43□□□□□ -1.22
PTPRD-205ENST00000397611 INSRP06213 1382 aa7.43□□□□□ -1.22
PTPRD-205ENST00000397611 RSPH4AQ5TD94 716 aa7.43□□□□□ -1.22
PTPRD-205ENST00000397611 NCOA1Q15788 1441 aa7.43□□□□□ -1.22
PTPRD-205ENST00000397611 IFT140Q96RY7 1462 aa7.42□□□□□ -1.22
PTPRD-205ENST00000397611 SUPT6HQ7KZ85 1726 aaKnown RBP7.42□□□□□ -1.22
PTPRD-205ENST00000397611 FANCIQ9NVI1 1328 aa7.42□□□□□ -1.22
PTPRD-205ENST00000397611 TROQ12816 1431 aaPredicted RBP7.42□□□□□ -1.22
PTPRD-205ENST00000397611 CNTLNQ9NXG0 1405 aa7.42□□□□□ -1.22
PTPRD-205ENST00000397611 GLIPR1L2Q4G1C9 344 aa7.42□□□□□ -1.22
PTPRD-205ENST00000397611 RTN4Q9NQC3 1192 aaKnown RBP7.42□□□□□ -1.22
PTPRD-205ENST00000397611 KDM5BQ9UGL1 1544 aa7.41□□□□□ -1.22
PTPRD-205ENST00000397611 IRX6P78412 446 aaPredicted RBP7.41□□□□□ -1.22
PTPRD-205ENST00000397611 ZBED9Q6R2W3 1325 aa7.41□□□□□ -1.22
PTPRD-205ENST00000397611 WASHC2AQ641Q2 1341 aa7.41□□□□□ -1.22
PTPRD-205ENST00000397611 WASHC2CQ9Y4E1 1318 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms