RNA–Protein interactions for RNA: ENST00000397386.7

LMCD1-202, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-202ENST00000397386 NUP160Q12769 1436 aa20.24■□□□□ 0.83
LMCD1-202ENST00000397386 FBLN2P98095 1184 aa20.22■□□□□ 0.83
LMCD1-202ENST00000397386 KIAA0586Q9BVV6 1533 aa20.22■□□□□ 0.83
LMCD1-202ENST00000397386 CHD1O14646 1710 aa20.18■□□□□ 0.82
LMCD1-202ENST00000397386 IQGAP2Q13576 1575 aa20.18■□□□□ 0.82
LMCD1-202ENST00000397386 CEP170Q5SW79 1584 aa20.18■□□□□ 0.82
LMCD1-202ENST00000397386 EFCAB5A4FU69 1503 aa20.15■□□□□ 0.82
LMCD1-202ENST00000397386 ARHGAP35Q9NRY4 1499 aa20.13■□□□□ 0.81
LMCD1-202ENST00000397386 UGGT2Q9NYU1 1516 aa20.11■□□□□ 0.81
LMCD1-202ENST00000397386 RANGAP1P46060 587 aaPredicted RBP20.09■□□□□ 0.81
LMCD1-202ENST00000397386 SAMD9Q5K651 1589 aa20.09■□□□□ 0.81
LMCD1-202ENST00000397386 ARAP1Q96P48 1450 aa20.06■□□□□ 0.8
LMCD1-202ENST00000397386 VPS8Q8N3P4 1428 aa20.05■□□□□ 0.8
LMCD1-202ENST00000397386 JPH4Q96JJ6 628 aa20.02■□□□□ 0.8
LMCD1-202ENST00000397386 CLASP1Q7Z460 1538 aa20.02■□□□□ 0.8
LMCD1-202ENST00000397386 DISP1Q96F81 1524 aa19.99■□□□□ 0.79
LMCD1-202ENST00000397386 SHROOM2Q13796 1616 aa19.99■□□□□ 0.79
LMCD1-202ENST00000397386 CARMIL2Q6F5E8 1435 aa19.98■□□□□ 0.79
LMCD1-202ENST00000397386 KIAA0556O60303 1618 aa19.97■□□□□ 0.79
LMCD1-202ENST00000397386 OSCARQ8IYS5 282 aa19.97■□□□□ 0.79
LMCD1-202ENST00000397386 FHOD3Q2V2M9 1422 aa19.97■□□□□ 0.79
LMCD1-202ENST00000397386 FMN1Q68DA7 1419 aa19.97■□□□□ 0.79
LMCD1-202ENST00000397386 P3H3Q8IVL6 736 aa19.94■□□□□ 0.78
LMCD1-202ENST00000397386 PRG4Q92954 1404 aaPredicted RBP19.92■□□□□ 0.78
LMCD1-202ENST00000397386 CASKIN1Q8WXD9 1431 aa19.88■□□□□ 0.77
LMCD1-202ENST00000397386 FYCO1Q9BQS8 1478 aa19.86■□□□□ 0.77
LMCD1-202ENST00000397386 PCF11O94913 1555 aaKnown RBP19.82■□□□□ 0.76
LMCD1-202ENST00000397386 MAP3K1Q13233 1512 aa19.82■□□□□ 0.76
LMCD1-202ENST00000397386 APLP2Q06481 763 aa19.81■□□□□ 0.76
LMCD1-202ENST00000397386 PTPRGP23470 1445 aa19.78■□□□□ 0.76
LMCD1-202ENST00000397386 HECW1Q76N89 1606 aa19.76■□□□□ 0.75
LMCD1-202ENST00000397386 ERCC6L2Q5T890 1561 aa19.76■□□□□ 0.75
LMCD1-202ENST00000397386 RAPGEF6Q8TEU7 1601 aa19.74■□□□□ 0.75
LMCD1-202ENST00000397386 CCDC18Q5T9S5 1454 aa19.72■□□□□ 0.75
LMCD1-202ENST00000397386 TIAM1Q13009 1591 aa19.72■□□□□ 0.75
LMCD1-202ENST00000397386 ABCA8O94911 1581 aa19.72■□□□□ 0.75
LMCD1-202ENST00000397386 PLB1Q6P1J6 1458 aa19.7■□□□□ 0.74
LMCD1-202ENST00000397386 CFAP43Q8NDM7 1665 aa19.7■□□□□ 0.74
LMCD1-202ENST00000397386 ATP1B4Q9UN42 357 aaPredicted RBP19.69■□□□□ 0.74
LMCD1-202ENST00000397386 NUP153P49790 1475 aaKnown RBP19.69■□□□□ 0.74
LMCD1-202ENST00000397386 TTBK1Q5TCY1 1321 aaPredicted RBP19.68■□□□□ 0.74
LMCD1-202ENST00000397386 EPRSP07814 1512 aaKnown RBP19.68■□□□□ 0.74
LMCD1-202ENST00000397386 UACAQ9BZF9 1416 aa19.67■□□□□ 0.74
LMCD1-202ENST00000397386 LRRIQ1Q96JM4 1722 aa19.65■□□□□ 0.74
LMCD1-202ENST00000397386 UHRF1BP1LA0JNW5 1464 aa19.64■□□□□ 0.73
LMCD1-202ENST00000397386 LRRC9Q6ZRR7 1453 aa19.64■□□□□ 0.73
LMCD1-202ENST00000397386 KANK4Q5T7N3 995 aaPredicted RBP19.63■□□□□ 0.73
LMCD1-202ENST00000397386 ABCC2Q92887 1545 aa19.62■□□□□ 0.73
LMCD1-202ENST00000397386 ARHGEF11O15085 1522 aa19.61■□□□□ 0.73
LMCD1-202ENST00000397386 PPARGC1BQ86YN6 1023 aaKnown RBP19.6■□□□□ 0.73
LMCD1-202ENST00000397386 CDK13Q14004 1512 aaKnown RBP19.59■□□□□ 0.73
LMCD1-202ENST00000397386 CDK11AQ9UQ88 783 aaPredicted RBP19.58■□□□□ 0.73
LMCD1-202ENST00000397386 MTUS2Q5JR59 1369 aa19.57■□□□□ 0.72
LMCD1-202ENST00000397386 ATP10BO94823 1461 aa19.56■□□□□ 0.72
LMCD1-202ENST00000397386 EHBP1L1Q8N3D4 1523 aa19.56■□□□□ 0.72
LMCD1-202ENST00000397386 TRIM26Q12899 539 aaPredicted RBP19.54■□□□□ 0.72
LMCD1-202ENST00000397386 DNAJC5Q9H3Z4 198 aa19.54■□□□□ 0.72
LMCD1-202ENST00000397386 KDM5BQ9UGL1 1544 aa19.53■□□□□ 0.72
LMCD1-202ENST00000397386 MAGI3Q5TCQ9 1506 aa19.52■□□□□ 0.71
LMCD1-202ENST00000397386 RIMBP3CA6NJZ7 1639 aa19.52■□□□□ 0.71
LMCD1-202ENST00000397386 RIMBP3BA6NNM3 1639 aa19.52■□□□□ 0.71
LMCD1-202ENST00000397386 RIMBP3Q9UFD9 1639 aa19.52■□□□□ 0.71
LMCD1-202ENST00000397386 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.51■□□□□ 0.71
LMCD1-202ENST00000397386 HNRNPUL2Q1KMD3 747 aaKnown RBP19.51■□□□□ 0.71
LMCD1-202ENST00000397386 ARID3CA6NKF2 412 aa19.5■□□□□ 0.71
LMCD1-202ENST00000397386 ADCY10Q96PN6 1610 aa19.5■□□□□ 0.71
LMCD1-202ENST00000397386 TROQ12816 1431 aaPredicted RBP19.49■□□□□ 0.71
LMCD1-202ENST00000397386 PLEKHD1A6NEE1 506 aa19.48■□□□□ 0.71
LMCD1-202ENST00000397386 SUPT6HQ7KZ85 1726 aaKnown RBP19.47■□□□□ 0.71
LMCD1-202ENST00000397386 ZCCHC11Q5TAX3 1644 aaKnown RBP19.45■□□□□ 0.7
LMCD1-202ENST00000397386 NCOA2Q15596 1464 aa19.45■□□□□ 0.7
LMCD1-202ENST00000397386 PHLDB1Q86UU1 1377 aa19.41■□□□□ 0.7
LMCD1-202ENST00000397386 RRBP1Q9P2E9 1410 aaKnown RBP19.41■□□□□ 0.7
LMCD1-202ENST00000397386 NPM1P06748 294 aaKnown RBP eCLIP19.38■□□□□ 0.69
LMCD1-202ENST00000397386 CYB5RLQ6IPT4 315 aa19.38■□□□□ 0.69
LMCD1-202ENST00000397386 MYOM3Q5VTT5 1437 aa19.37■□□□□ 0.69
LMCD1-202ENST00000397386 KIF14Q15058 1648 aa19.37■□□□□ 0.69
LMCD1-202ENST00000397386 PCGF6Q9BYE7 350 aa19.35■□□□□ 0.69
LMCD1-202ENST00000397386 CCNB3Q8WWL7 1395 aa19.34■□□□□ 0.69
LMCD1-202ENST00000397386 WDR7Q9Y4E6 1490 aa19.34■□□□□ 0.69
LMCD1-202ENST00000397386 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.34■□□□□ 0.69
LMCD1-202ENST00000397386 ABCC10Q5T3U5 1492 aa19.33■□□□□ 0.69
LMCD1-202ENST00000397386 FGD6Q6ZV73 1430 aa19.33■□□□□ 0.68
LMCD1-202ENST00000397386 MIA2Q96PC5 1412 aa19.33■□□□□ 0.68
LMCD1-202ENST00000397386 ASXL2Q76L83 1435 aa19.31■□□□□ 0.68
LMCD1-202ENST00000397386 MAPKBP1O60336 1514 aa19.29■□□□□ 0.68
LMCD1-202ENST00000397386 ITSN2Q9NZM3 1697 aa19.28■□□□□ 0.68
LMCD1-202ENST00000397386 GPATCH8Q9UKJ3 1502 aaKnown RBP19.28■□□□□ 0.68
LMCD1-202ENST00000397386 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.26■□□□□ 0.67
LMCD1-202ENST00000397386 TCOF1Q13428 1488 aaKnown RBP19.25■□□□□ 0.67
LMCD1-202ENST00000397386 KCNH8Q96L42 1107 aa19.24■□□□□ 0.67
LMCD1-202ENST00000397386 PTPN23Q9H3S7 1636 aa19.23■□□□□ 0.67
LMCD1-202ENST00000397386 CDC42BPAQ5VT25 1732 aa19.22■□□□□ 0.67
LMCD1-202ENST00000397386 TTC37Q6PGP7 1564 aa19.22■□□□□ 0.67
LMCD1-202ENST00000397386 CFDP1Q9UEE9 299 aaPredicted RBP19.21■□□□□ 0.67
LMCD1-202ENST00000397386 ABCA9Q8IUA7 1624 aa19.21■□□□□ 0.67
LMCD1-202ENST00000397386 PREX2Q70Z35 1606 aa19.2■□□□□ 0.66
LMCD1-202ENST00000397386 FAM50AQ14320 339 aaKnown RBP19.2■□□□□ 0.66
LMCD1-202ENST00000397386 ARAP3Q8WWN8 1544 aa19.19■□□□□ 0.66
LMCD1-202ENST00000397386 PLCH2O75038 1416 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms