RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 AQRO60306 1485 aaKnown RBP eCLIP21.92■■□□□ 1.12e-6■■□□□ 12.9
MCF2L-205ENST00000397017 ZNF316A6NFI3 1004 aaPredicted RBP21.9■■□□□ 1.1
MCF2L-205ENST00000397017 CENPBP07199 599 aaPredicted RBP21.89■■□□□ 1.1
MCF2L-205ENST00000397017 HIRIP3Q9BW71 556 aaPredicted RBP21.87■■□□□ 1.09
MCF2L-205ENST00000397017 TOP2BQ02880 1626 aa21.85■■□□□ 1.09
MCF2L-205ENST00000397017 POLA1P09884 1462 aaPredicted RBP21.81■■□□□ 1.08
MCF2L-205ENST00000397017 TOPBP1Q92547 1522 aa21.8■■□□□ 1.08
MCF2L-205ENST00000397017 CCNB3Q8WWL7 1395 aa21.8■■□□□ 1.08
MCF2L-205ENST00000397017 GAPVD1Q14C86 1478 aa21.8■■□□□ 1.08
MCF2L-205ENST00000397017 SIN3AQ96ST3 1273 aa21.78■■□□□ 1.08
MCF2L-205ENST00000397017 FHAD1B1AJZ9 1412 aa21.77■■□□□ 1.08
MCF2L-205ENST00000397017 PLEKHD1A6NEE1 506 aa21.75■■□□□ 1.07
MCF2L-205ENST00000397017 PRXQ9BXM0 1461 aa21.74■■□□□ 1.07
MCF2L-205ENST00000397017 ARAP1Q96P48 1450 aa21.73■■□□□ 1.07
MCF2L-205ENST00000397017 KIF21BO75037 1637 aa21.73■■□□□ 1.07
MCF2L-205ENST00000397017 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.72■■□□□ 1.076e-7■■□□□ 13.5
MCF2L-205ENST00000397017 CFDP1Q9UEE9 299 aaPredicted RBP21.71■■□□□ 1.07
MCF2L-205ENST00000397017 JPH4Q96JJ6 628 aa21.69■■□□□ 1.06
MCF2L-205ENST00000397017 ARHGAP35Q9NRY4 1499 aa21.63■■□□□ 1.05
MCF2L-205ENST00000397017 TSPY4P0CV99 314 aa21.62■■□□□ 1.05
MCF2L-205ENST00000397017 TSPY10P0CW01 314 aa21.62■■□□□ 1.05
MCF2L-205ENST00000397017 TONSLQ96HA7 1378 aa21.61■■□□□ 1.05
MCF2L-205ENST00000397017 URB2Q14146 1524 aaKnown RBP21.6■■□□□ 1.05
MCF2L-205ENST00000397017 DDX10Q13206 875 aaKnown RBP21.59■■□□□ 1.05
MCF2L-205ENST00000397017 FMN1Q68DA7 1419 aa21.59■■□□□ 1.05
MCF2L-205ENST00000397017 FOXD1Q16676 465 aa21.59■■□□□ 1.05
MCF2L-205ENST00000397017 NPM1P06748 294 aaKnown RBP eCLIP21.58■■□□□ 1.05
MCF2L-205ENST00000397017 SLC4A1APQ9BWU0 796 aaKnown RBP21.57■■□□□ 1.04
MCF2L-205ENST00000397017 DNMBPQ6XZF7 1577 aa21.54■■□□□ 1.04
MCF2L-205ENST00000397017 MIER1Q8N108 512 aa21.53■■□□□ 1.04
MCF2L-205ENST00000397017 KDM2AQ9Y2K7 1162 aa21.53■■□□□ 1.04
MCF2L-205ENST00000397017 RAB3GAP2Q9H2M9 1393 aa21.52■■□□□ 1.04
MCF2L-205ENST00000397017 SENP3Q9H4L4 574 aaPredicted RBP21.52■■□□□ 1.04
MCF2L-205ENST00000397017 MRC2Q9UBG0 1479 aa21.51■■□□□ 1.03
MCF2L-205ENST00000397017 ERICH3Q5RHP9 1530 aa21.5■■□□□ 1.03
MCF2L-205ENST00000397017 PHLDB1Q86UU1 1377 aa21.48■■□□□ 1.03
MCF2L-205ENST00000397017 LAMC3Q9Y6N6 1575 aa21.47■■□□□ 1.03
MCF2L-205ENST00000397017 ZNF608Q9ULD9 1512 aaPredicted RBP21.47■■□□□ 1.03
MCF2L-205ENST00000397017 ABCA10Q8WWZ4 1543 aa21.45■■□□□ 1.02
MCF2L-205ENST00000397017 ZNF644Q9H582 1327 aaPredicted RBP21.44■■□□□ 1.02
MCF2L-205ENST00000397017 CARMIL2Q6F5E8 1435 aa21.43■■□□□ 1.02
MCF2L-205ENST00000397017 BIVM-ERCC5R4GMW8 1640 aa21.42■■□□□ 1.02
MCF2L-205ENST00000397017 GRIN2BQ13224 1484 aa21.42■■□□□ 1.02
MCF2L-205ENST00000397017 SETD5Q9C0A6 1442 aa21.41■■□□□ 1.02
MCF2L-205ENST00000397017 RGL3Q3MIN7 710 aa21.41■■□□□ 1.02
MCF2L-205ENST00000397017 CHGAP10645 457 aaKnown RBP21.4■■□□□ 1.02
MCF2L-205ENST00000397017 PELP1Q8IZL8 1130 aaKnown RBP21.4■■□□□ 1.02
MCF2L-205ENST00000397017 PLPPR3Q6T4P5 718 aa21.38■■□□□ 1.01
MCF2L-205ENST00000397017 HNRNPMP52272 730 aaKnown RBP eCLIP21.37■■□□□ 1.01
MCF2L-205ENST00000397017 SNAPC4Q5SXM2 1469 aa21.36■■□□□ 1.01
MCF2L-205ENST00000397017 ANP32CO43423 234 aa21.36■■□□□ 1.01
MCF2L-205ENST00000397017 GTF3C3Q9Y5Q9 886 aa21.34■■□□□ 1.01
MCF2L-205ENST00000397017 LRRC9Q6ZRR7 1453 aa21.32■■□□□ 1
MCF2L-205ENST00000397017 DHX57Q6P158 1386 aaKnown RBP21.32■■□□□ 1
MCF2L-205ENST00000397017 IFT140Q96RY7 1462 aa21.31■■□□□ 1
MCF2L-205ENST00000397017 PTPRGP23470 1445 aa21.29■■□□□ 1
MCF2L-205ENST00000397017 SENP3-EIF4A1A0A087X0R7 540 aa21.25■□□□□ 0.99
MCF2L-205ENST00000397017 CASKIN1Q8WXD9 1431 aa21.24■□□□□ 0.99
MCF2L-205ENST00000397017 NEFLP07196 543 aa21.23■□□□□ 0.99
MCF2L-205ENST00000397017 MPHOSPH9Q99550 1183 aa21.23■□□□□ 0.99
MCF2L-205ENST00000397017 ACIN1Q9UKV3 1341 aaKnown RBP21.21■□□□□ 0.99
MCF2L-205ENST00000397017 BCANQ96GW7 911 aa21.21■□□□□ 0.99
MCF2L-205ENST00000397017 PKD2Q13563 968 aa21.2■□□□□ 0.98
MCF2L-205ENST00000397017 PRDM2Q13029 1718 aa21.19■□□□□ 0.98
MCF2L-205ENST00000397017 FGD6Q6ZV73 1430 aa21.18■□□□□ 0.98
MCF2L-205ENST00000397017 CLSPNQ9HAW4 1339 aa21.17■□□□□ 0.98
MCF2L-205ENST00000397017 CCDC18Q5T9S5 1454 aa21.16■□□□□ 0.98
MCF2L-205ENST00000397017 KIF21AQ7Z4S6 1674 aa21.16■□□□□ 0.98
MCF2L-205ENST00000397017 NCOA2Q15596 1464 aa21.16■□□□□ 0.98
MCF2L-205ENST00000397017 PRG4Q92954 1404 aaPredicted RBP21.15■□□□□ 0.98
MCF2L-205ENST00000397017 CYB5RLQ6IPT4 315 aa21.15■□□□□ 0.98
MCF2L-205ENST00000397017 EIF4G2P78344 907 aaKnown RBP eCLIP21.15■□□□□ 0.98
MCF2L-205ENST00000397017 CDK13Q14004 1512 aaKnown RBP21.13■□□□□ 0.97
MCF2L-205ENST00000397017 PCF11O94913 1555 aaKnown RBP21.11■□□□□ 0.97
MCF2L-205ENST00000397017 MYOM3Q5VTT5 1437 aa21.1■□□□□ 0.97
MCF2L-205ENST00000397017 FYCO1Q9BQS8 1478 aa21.1■□□□□ 0.97
MCF2L-205ENST00000397017 TIAM1Q13009 1591 aa21.1■□□□□ 0.97
MCF2L-205ENST00000397017 OSCARQ8IYS5 282 aa21.1■□□□□ 0.97
MCF2L-205ENST00000397017 NUP155O75694 1391 aa21.1■□□□□ 0.97
MCF2L-205ENST00000397017 FAM9BQ8IZU0 186 aa21.1■□□□□ 0.97
MCF2L-205ENST00000397017 RRBP1Q9P2E9 1410 aaKnown RBP21.1■□□□□ 0.97
MCF2L-205ENST00000397017 DCAF11Q8TEB1 546 aa21.09■□□□□ 0.97
MCF2L-205ENST00000397017 L3MBTL2Q969R5 705 aa21.08■□□□□ 0.97
MCF2L-205ENST00000397017 PPP1R15AO75807 674 aaPredicted RBP21.07■□□□□ 0.96
MCF2L-205ENST00000397017 PLB1Q6P1J6 1458 aa21.07■□□□□ 0.96
MCF2L-205ENST00000397017 EFCAB2Q5VUJ9 269 aa21.07■□□□□ 0.96
MCF2L-205ENST00000397017 GGT6Q6P531 493 aa21.05■□□□□ 0.96
MCF2L-205ENST00000397017 GRIN2AQ12879 1464 aa21.05■□□□□ 0.96
MCF2L-205ENST00000397017 KIAA0586Q9BVV6 1533 aa21.05■□□□□ 0.96
MCF2L-205ENST00000397017 SALL2Q9Y467 1007 aaPredicted RBP21.04■□□□□ 0.96
MCF2L-205ENST00000397017 EFCAB5A4FU69 1503 aa21.03■□□□□ 0.96
MCF2L-205ENST00000397017 STAG3Q9UJ98 1225 aa21.02■□□□□ 0.96
MCF2L-205ENST00000397017 IQGAP2Q13576 1575 aa21.02■□□□□ 0.96
MCF2L-205ENST00000397017 CARD11Q9BXL7 1154 aa21.01■□□□□ 0.95
MCF2L-205ENST00000397017 CUL7Q14999 1698 aa21.01■□□□□ 0.95
MCF2L-205ENST00000397017 MLECQ14165 292 aa21■□□□□ 0.95
MCF2L-205ENST00000397017 SCAF1Q9H7N4 1312 aaKnown RBP21■□□□□ 0.95
MCF2L-205ENST00000397017 HNRNPUQ00839 825 aaKnown RBP eCLIP21■□□□□ 0.95
MCF2L-205ENST00000397017 ANKRD30AQ9BXX3 1397 aa21■□□□□ 0.95
MCF2L-205ENST00000397017 HSPA5P11021 654 aaKnown RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms