RNA–Protein interactions for RNA: ENST00000396999.2

PPARG-203, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

TSL 1 (best)

Gene PPARG, Length 1,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-203ENST00000396999 PIAS4Q8N2W9 510 aaPredicted RBP19.07■□□□□ 0.64
PPARG-203ENST00000396999 GRIN2AQ12879 1464 aa19.04■□□□□ 0.64
PPARG-203ENST00000396999 UBTFP17480 764 aaKnown RBP19.03■□□□□ 0.64
PPARG-203ENST00000396999 TNIKQ9UKE5 1360 aa19.02■□□□□ 0.64
PPARG-203ENST00000396999 CHMP7Q8WUX9 453 aaPredicted RBP19■□□□□ 0.63
PPARG-203ENST00000396999 CTTNBP2Q8WZ74 1663 aa18.99■□□□□ 0.63
PPARG-203ENST00000396999 CHD1O14646 1710 aa18.98■□□□□ 0.63
PPARG-203ENST00000396999 FBLN2P98095 1184 aa18.97■□□□□ 0.63
PPARG-203ENST00000396999 PPP6R1Q9UPN7 881 aa18.94■□□□□ 0.62
PPARG-203ENST00000396999 NUP160Q12769 1436 aa18.92■□□□□ 0.62
PPARG-203ENST00000396999 CEP170Q5SW79 1584 aa18.92■□□□□ 0.62
PPARG-203ENST00000396999 CEP162Q5TB80 1403 aa18.89■□□□□ 0.61
PPARG-203ENST00000396999 IQGAP2Q13576 1575 aa18.88■□□□□ 0.61
PPARG-203ENST00000396999 KIAA0586Q9BVV6 1533 aa18.87■□□□□ 0.61
PPARG-203ENST00000396999 ADRA2BP18089 450 aa18.84■□□□□ 0.61
PPARG-203ENST00000396999 CLIP1P30622 1438 aa18.83■□□□□ 0.6
PPARG-203ENST00000396999 EFCAB5A4FU69 1503 aa18.79■□□□□ 0.6
PPARG-203ENST00000396999 CLASP1Q7Z460 1538 aa18.79■□□□□ 0.6
PPARG-203ENST00000396999 UGGT2Q9NYU1 1516 aa18.79■□□□□ 0.6
PPARG-203ENST00000396999 RANGAP1P46060 587 aaPredicted RBP18.78■□□□□ 0.6
PPARG-203ENST00000396999 SAMD9Q5K651 1589 aa18.76■□□□□ 0.59
PPARG-203ENST00000396999 ARHGAP35Q9NRY4 1499 aa18.76■□□□□ 0.59
PPARG-203ENST00000396999 SHROOM2Q13796 1616 aa18.73■□□□□ 0.59
PPARG-203ENST00000396999 OSCARQ8IYS5 282 aa18.71■□□□□ 0.59
PPARG-203ENST00000396999 ARAP1Q96P48 1450 aa18.7■□□□□ 0.58
PPARG-203ENST00000396999 JPH4Q96JJ6 628 aa18.7■□□□□ 0.58
PPARG-203ENST00000396999 KIAA0556O60303 1618 aa18.69■□□□□ 0.58
PPARG-203ENST00000396999 DISP1Q96F81 1524 aa18.69■□□□□ 0.58
PPARG-203ENST00000396999 FHOD3Q2V2M9 1422 aa18.66■□□□□ 0.58
PPARG-203ENST00000396999 CARMIL2Q6F5E8 1435 aa18.66■□□□□ 0.58
PPARG-203ENST00000396999 PRG4Q92954 1404 aaPredicted RBP18.64■□□□□ 0.57
PPARG-203ENST00000396999 VPS8Q8N3P4 1428 aa18.63■□□□□ 0.57
PPARG-203ENST00000396999 P3H3Q8IVL6 736 aa18.63■□□□□ 0.57
PPARG-203ENST00000396999 FMN1Q68DA7 1419 aa18.59■□□□□ 0.57
PPARG-203ENST00000396999 ERCC6L2Q5T890 1561 aa18.56■□□□□ 0.56
PPARG-203ENST00000396999 PCF11O94913 1555 aaKnown RBP18.53■□□□□ 0.56
PPARG-203ENST00000396999 FYCO1Q9BQS8 1478 aa18.51■□□□□ 0.55
PPARG-203ENST00000396999 CASKIN1Q8WXD9 1431 aa18.5■□□□□ 0.55
PPARG-203ENST00000396999 PTPRGP23470 1445 aa18.49■□□□□ 0.55
PPARG-203ENST00000396999 TTBK1Q5TCY1 1321 aaPredicted RBP18.46■□□□□ 0.55
PPARG-203ENST00000396999 HECW1Q76N89 1606 aa18.46■□□□□ 0.55
PPARG-203ENST00000396999 RAPGEF6Q8TEU7 1601 aa18.46■□□□□ 0.55
PPARG-203ENST00000396999 ARHGEF11O15085 1522 aa18.45■□□□□ 0.54
PPARG-203ENST00000396999 ABCA8O94911 1581 aa18.45■□□□□ 0.54
PPARG-203ENST00000396999 PLB1Q6P1J6 1458 aa18.43■□□□□ 0.54
PPARG-203ENST00000396999 APLP2Q06481 763 aa18.4■□□□□ 0.54
PPARG-203ENST00000396999 CFAP43Q8NDM7 1665 aa18.39■□□□□ 0.53
PPARG-203ENST00000396999 RIMBP3CA6NJZ7 1639 aa18.39■□□□□ 0.53
PPARG-203ENST00000396999 RIMBP3BA6NNM3 1639 aa18.39■□□□□ 0.53
PPARG-203ENST00000396999 RIMBP3Q9UFD9 1639 aa18.39■□□□□ 0.53
PPARG-203ENST00000396999 MAP3K1Q13233 1512 aa18.39■□□□□ 0.53
PPARG-203ENST00000396999 NUP153P49790 1475 aaKnown RBP18.39■□□□□ 0.53
PPARG-203ENST00000396999 CCDC18Q5T9S5 1454 aa18.39■□□□□ 0.53
PPARG-203ENST00000396999 UACAQ9BZF9 1416 aa18.39■□□□□ 0.53
PPARG-203ENST00000396999 ATP1B4Q9UN42 357 aaPredicted RBP18.39■□□□□ 0.53
PPARG-203ENST00000396999 LRRIQ1Q96JM4 1722 aa18.39■□□□□ 0.53
PPARG-203ENST00000396999 TIAM1Q13009 1591 aa18.38■□□□□ 0.53
PPARG-203ENST00000396999 ABCC2Q92887 1545 aa18.37■□□□□ 0.53
PPARG-203ENST00000396999 EPRSP07814 1512 aaKnown RBP18.36■□□□□ 0.53
PPARG-203ENST00000396999 UHRF1BP1LA0JNW5 1464 aa18.35■□□□□ 0.53
PPARG-203ENST00000396999 CDK13Q14004 1512 aaKnown RBP18.32■□□□□ 0.52
PPARG-203ENST00000396999 ADCY10Q96PN6 1610 aa18.31■□□□□ 0.52
PPARG-203ENST00000396999 LRRC9Q6ZRR7 1453 aa18.28■□□□□ 0.52
PPARG-203ENST00000396999 ATP10BO94823 1461 aa18.27■□□□□ 0.52
PPARG-203ENST00000396999 ARID3CA6NKF2 412 aa18.27■□□□□ 0.52
PPARG-203ENST00000396999 KDM5BQ9UGL1 1544 aa18.26■□□□□ 0.51
PPARG-203ENST00000396999 EHBP1L1Q8N3D4 1523 aa18.25■□□□□ 0.51
PPARG-203ENST00000396999 KANK4Q5T7N3 995 aaPredicted RBP18.24■□□□□ 0.51
PPARG-203ENST00000396999 ZCCHC11Q5TAX3 1644 aaKnown RBP18.24■□□□□ 0.51
PPARG-203ENST00000396999 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.23■□□□□ 0.51
PPARG-203ENST00000396999 HNRNPUL2Q1KMD3 747 aaKnown RBP18.23■□□□□ 0.51
PPARG-203ENST00000396999 PPARGC1BQ86YN6 1023 aaKnown RBP18.23■□□□□ 0.51
PPARG-203ENST00000396999 MAGI3Q5TCQ9 1506 aa18.23■□□□□ 0.51
PPARG-203ENST00000396999 MTUS2Q5JR59 1369 aa18.23■□□□□ 0.51
PPARG-203ENST00000396999 CDK11AQ9UQ88 783 aaPredicted RBP18.22■□□□□ 0.51
PPARG-203ENST00000396999 CYB5RLQ6IPT4 315 aa18.21■□□□□ 0.51
PPARG-203ENST00000396999 TROQ12816 1431 aaPredicted RBP18.18■□□□□ 0.5
PPARG-203ENST00000396999 SUPT6HQ7KZ85 1726 aaKnown RBP18.17■□□□□ 0.5
PPARG-203ENST00000396999 PLEKHD1A6NEE1 506 aa18.16■□□□□ 0.5
PPARG-203ENST00000396999 NPM1P06748 294 aaKnown RBP eCLIP18.14■□□□□ 0.49
PPARG-203ENST00000396999 DNAJC5Q9H3Z4 198 aa18.13■□□□□ 0.49
PPARG-203ENST00000396999 KIF14Q15058 1648 aa18.13■□□□□ 0.49
PPARG-203ENST00000396999 NCOA2Q15596 1464 aa18.12■□□□□ 0.49
PPARG-203ENST00000396999 WDR7Q9Y4E6 1490 aa18.1■□□□□ 0.49
PPARG-203ENST00000396999 ASXL2Q76L83 1435 aa18.09■□□□□ 0.49
PPARG-203ENST00000396999 MAPKBP1O60336 1514 aa18.09■□□□□ 0.49
PPARG-203ENST00000396999 PHLDB1Q86UU1 1377 aa18.07■□□□□ 0.48
PPARG-203ENST00000396999 ABCC10Q5T3U5 1492 aa18.04■□□□□ 0.48
PPARG-203ENST00000396999 MYOM3Q5VTT5 1437 aa18.03■□□□□ 0.48
PPARG-203ENST00000396999 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.02■□□□□ 0.48
PPARG-203ENST00000396999 ITSN2Q9NZM3 1697 aa18.02■□□□□ 0.48
PPARG-203ENST00000396999 CCNB3Q8WWL7 1395 aa18.02■□□□□ 0.47
PPARG-203ENST00000396999 TRIM26Q12899 539 aaPredicted RBP18.01■□□□□ 0.47
PPARG-203ENST00000396999 RRBP1Q9P2E9 1410 aaKnown RBP18.01■□□□□ 0.47
PPARG-203ENST00000396999 TTC37Q6PGP7 1564 aa18.01■□□□□ 0.47
PPARG-203ENST00000396999 KCNH8Q96L42 1107 aa17.99■□□□□ 0.47
PPARG-203ENST00000396999 FGD6Q6ZV73 1430 aa17.99■□□□□ 0.47
PPARG-203ENST00000396999 GPATCH8Q9UKJ3 1502 aaKnown RBP17.98■□□□□ 0.47
PPARG-203ENST00000396999 CDC42BPAQ5VT25 1732 aa17.98■□□□□ 0.47
PPARG-203ENST00000396999 ABCA9Q8IUA7 1624 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms