RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 SHROOM2Q13796 1616 aa27.13■■□□□ 1.93
AP1S3-202ENST00000396653 DNAJC5Q9H3Z4 198 aa27.13■■□□□ 1.93
AP1S3-202ENST00000396653 IQGAP2Q13576 1575 aa27.08■■□□□ 1.93
AP1S3-202ENST00000396653 GOLGA3Q08378 1498 aa27.06■■□□□ 1.92
AP1S3-202ENST00000396653 ARHGEF11O15085 1522 aa27■■□□□ 1.91
AP1S3-202ENST00000396653 RIMBP3CA6NJZ7 1639 aa26.98■■□□□ 1.91
AP1S3-202ENST00000396653 RIMBP3BA6NNM3 1639 aa26.98■■□□□ 1.91
AP1S3-202ENST00000396653 RIMBP3Q9UFD9 1639 aa26.98■■□□□ 1.91
AP1S3-202ENST00000396653 UGGT2Q9NYU1 1516 aa26.95■■□□□ 1.91
AP1S3-202ENST00000396653 JPH4Q96JJ6 628 aa26.95■■□□□ 1.9
AP1S3-202ENST00000396653 PRG4Q92954 1404 aaPredicted RBP26.9■■□□□ 1.9
AP1S3-202ENST00000396653 ERCC6L2Q5T890 1561 aa26.88■■□□□ 1.89
AP1S3-202ENST00000396653 KIAA0556O60303 1618 aa26.83■■□□□ 1.88
AP1S3-202ENST00000396653 CARMIL2Q6F5E8 1435 aa26.82■■□□□ 1.88
AP1S3-202ENST00000396653 DISP1Q96F81 1524 aa26.82■■□□□ 1.88
AP1S3-202ENST00000396653 UBTFP17480 764 aaKnown RBP26.82■■□□□ 1.88
AP1S3-202ENST00000396653 ARAP1Q96P48 1450 aa26.81■■□□□ 1.88
AP1S3-202ENST00000396653 SAMD9Q5K651 1589 aa26.8■■□□□ 1.88
AP1S3-202ENST00000396653 TNIKQ9UKE5 1360 aa26.76■■□□□ 1.87
AP1S3-202ENST00000396653 EHMT2Q96KQ7 1210 aa26.76■■□□□ 1.87
AP1S3-202ENST00000396653 EFCAB5A4FU69 1503 aa26.75■■□□□ 1.87
AP1S3-202ENST00000396653 PTPRGP23470 1445 aa26.62■■□□□ 1.85
AP1S3-202ENST00000396653 ARHGAP35Q9NRY4 1499 aa26.6■■□□□ 1.85
AP1S3-202ENST00000396653 CYB5RLQ6IPT4 315 aa26.59■■□□□ 1.85
AP1S3-202ENST00000396653 LOC105371045A0A1W2PR82 267 aa26.58■■□□□ 1.85
AP1S3-202ENST00000396653 CLIP1P30622 1438 aa26.55■■□□□ 1.84
AP1S3-202ENST00000396653 RANGAP1P46060 587 aaPredicted RBP26.54■■□□□ 1.84
AP1S3-202ENST00000396653 FHOD3Q2V2M9 1422 aa26.54■■□□□ 1.84
AP1S3-202ENST00000396653 CEP162Q5TB80 1403 aa26.52■■□□□ 1.84
AP1S3-202ENST00000396653 ADCY10Q96PN6 1610 aa26.51■■□□□ 1.83
AP1S3-202ENST00000396653 ABCA8O94911 1581 aa26.5■■□□□ 1.83
AP1S3-202ENST00000396653 UHRF1BP1LA0JNW5 1464 aa26.5■■□□□ 1.83
AP1S3-202ENST00000396653 P3H3Q8IVL6 736 aa26.5■■□□□ 1.83
AP1S3-202ENST00000396653 UACAQ9BZF9 1416 aa26.49■■□□□ 1.83
AP1S3-202ENST00000396653 ABCC2Q92887 1545 aa26.49■■□□□ 1.83
AP1S3-202ENST00000396653 RAPGEF6Q8TEU7 1601 aa26.44■■□□□ 1.82
AP1S3-202ENST00000396653 FMN1Q68DA7 1419 aa26.44■■□□□ 1.82
AP1S3-202ENST00000396653 PLB1Q6P1J6 1458 aa26.43■■□□□ 1.82
AP1S3-202ENST00000396653 TTBK1Q5TCY1 1321 aaPredicted RBP26.43■■□□□ 1.82
AP1S3-202ENST00000396653 KDM5BQ9UGL1 1544 aa26.35■■□□□ 1.81
AP1S3-202ENST00000396653 HECW1Q76N89 1606 aa26.33■■□□□ 1.81
AP1S3-202ENST00000396653 ZCCHC11Q5TAX3 1644 aaKnown RBP26.32■■□□□ 1.8
AP1S3-202ENST00000396653 MAPKBP1O60336 1514 aa26.3■■□□□ 1.8
AP1S3-202ENST00000396653 PCF11O94913 1555 aaKnown RBP26.3■■□□□ 1.8
AP1S3-202ENST00000396653 NUP153P49790 1475 aaKnown RBP26.3■■□□□ 1.8
AP1S3-202ENST00000396653 NPM1P06748 294 aaKnown RBP eCLIP26.27■■□□□ 1.8
AP1S3-202ENST00000396653 CASKIN1Q8WXD9 1431 aa26.27■■□□□ 1.8
AP1S3-202ENST00000396653 FYCO1Q9BQS8 1478 aa26.26■■□□□ 1.79
AP1S3-202ENST00000396653 ATP10BO94823 1461 aa26.22■■□□□ 1.79
AP1S3-202ENST00000396653 LRRIQ1Q96JM4 1722 aa26.21■■□□□ 1.79
AP1S3-202ENST00000396653 VPS8Q8N3P4 1428 aa26.21■■□□□ 1.79
AP1S3-202ENST00000396653 EPRSP07814 1512 aaKnown RBP26.19■■□□□ 1.78
AP1S3-202ENST00000396653 CCDC18Q5T9S5 1454 aa26.17■■□□□ 1.78
AP1S3-202ENST00000396653 ASXL2Q76L83 1435 aa26.15■■□□□ 1.78
AP1S3-202ENST00000396653 CDK13Q14004 1512 aaKnown RBP26.14■■□□□ 1.77
AP1S3-202ENST00000396653 WDR7Q9Y4E6 1490 aa26.12■■□□□ 1.77
AP1S3-202ENST00000396653 DIP2BQ9P265 1576 aa26.09■■□□□ 1.77
AP1S3-202ENST00000396653 KIF13AQ9H1H9 1805 aa26.08■■□□□ 1.77
AP1S3-202ENST00000396653 ABCC10Q5T3U5 1492 aa26.08■■□□□ 1.77
AP1S3-202ENST00000396653 ARID3CA6NKF2 412 aa26.07■■□□□ 1.76
AP1S3-202ENST00000396653 ATP1B4Q9UN42 357 aaPredicted RBP26.07■■□□□ 1.76
AP1S3-202ENST00000396653 CFAP43Q8NDM7 1665 aa26.06■■□□□ 1.76
AP1S3-202ENST00000396653 GLI2P10070 1586 aa26.04■■□□□ 1.76
AP1S3-202ENST00000396653 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.03■■□□□ 1.76
AP1S3-202ENST00000396653 HNRNPUL2Q1KMD3 747 aaKnown RBP26.03■■□□□ 1.76
AP1S3-202ENST00000396653 MAP3K1Q13233 1512 aa25.99■■□□□ 1.75
AP1S3-202ENST00000396653 CDK11AQ9UQ88 783 aaPredicted RBP25.99■■□□□ 1.75
AP1S3-202ENST00000396653 TIAM1Q13009 1591 aa25.99■■□□□ 1.75
AP1S3-202ENST00000396653 PLEKHD1A6NEE1 506 aa25.98■■□□□ 1.75
AP1S3-202ENST00000396653 TROQ12816 1431 aaPredicted RBP25.97■■□□□ 1.75
AP1S3-202ENST00000396653 ABCA9Q8IUA7 1624 aa25.94■■□□□ 1.74
AP1S3-202ENST00000396653 MAP3K4Q9Y6R4 1608 aa25.94■■□□□ 1.74
AP1S3-202ENST00000396653 MAGI3Q5TCQ9 1506 aa25.93■■□□□ 1.74
AP1S3-202ENST00000396653 KIF14Q15058 1648 aa25.92■■□□□ 1.74
AP1S3-202ENST00000396653 EHBP1L1Q8N3D4 1523 aa25.92■■□□□ 1.74
AP1S3-202ENST00000396653 TRHP20396 242 aaPredicted RBP25.91■■□□□ 1.74
AP1S3-202ENST00000396653 FAM69CQ0P6D2 419 aa25.9■■□□□ 1.74
AP1S3-202ENST00000396653 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.86■■□□□ 1.73
AP1S3-202ENST00000396653 MTUS2Q5JR59 1369 aa25.85■■□□□ 1.73
AP1S3-202ENST00000396653 KCNH8Q96L42 1107 aa25.85■■□□□ 1.73
AP1S3-202ENST00000396653 TTC37Q6PGP7 1564 aa25.84■■□□□ 1.73
AP1S3-202ENST00000396653 PPRC1Q5VV67 1664 aaKnown RBP25.83■■□□□ 1.73
AP1S3-202ENST00000396653 LRRC9Q6ZRR7 1453 aa25.83■■□□□ 1.73
AP1S3-202ENST00000396653 TSPOAP1O95153 1857 aa25.82■■□□□ 1.72
AP1S3-202ENST00000396653 APLP2Q06481 763 aa25.81■■□□□ 1.72
AP1S3-202ENST00000396653 SUPT6HQ7KZ85 1726 aaKnown RBP25.8■■□□□ 1.72
AP1S3-202ENST00000396653 MYO5CQ9NQX4 1742 aa25.8■■□□□ 1.72
AP1S3-202ENST00000396653 CD109Q6YHK3 1445 aa25.79■■□□□ 1.72
AP1S3-202ENST00000396653 TEX14Q8IWB6 1497 aa25.76■■□□□ 1.71
AP1S3-202ENST00000396653 ARAP3Q8WWN8 1544 aa25.76■■□□□ 1.71
AP1S3-202ENST00000396653 CDC42BPAQ5VT25 1732 aa25.73■■□□□ 1.71
AP1S3-202ENST00000396653 PREX2Q70Z35 1606 aa25.73■■□□□ 1.71
AP1S3-202ENST00000396653 CFAP74Q9C0B2 1584 aa25.72■■□□□ 1.71
AP1S3-202ENST00000396653 ITSN2Q9NZM3 1697 aa25.71■■□□□ 1.71
AP1S3-202ENST00000396653 NCOA2Q15596 1464 aa25.69■■□□□ 1.7
AP1S3-202ENST00000396653 PLCH2O75038 1416 aa25.69■■□□□ 1.7
AP1S3-202ENST00000396653 CDC42BPBQ9Y5S2 1711 aa25.68■■□□□ 1.7
AP1S3-202ENST00000396653 KANK4Q5T7N3 995 aaPredicted RBP25.68■■□□□ 1.7
AP1S3-202ENST00000396653 NEO1Q92859 1461 aa25.66■■□□□ 1.7
AP1S3-202ENST00000396653 GPATCH8Q9UKJ3 1502 aaKnown RBP25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms