RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 CSRNP3Q8WYN3 585 aa14.46□□□□□ -0.09
TRIM39-203ENST00000396547 ADAMTS12P58397 1594 aa14.45□□□□□ -0.1
TRIM39-203ENST00000396547 GAPVD1Q14C86 1478 aa14.45□□□□□ -0.1
TRIM39-203ENST00000396547 CLASP1Q7Z460 1538 aa14.45□□□□□ -0.1
TRIM39-203ENST00000396547 APLP2Q06481 763 aa14.44□□□□□ -0.1
TRIM39-203ENST00000396547 SYNJ2O15056 1496 aa14.43□□□□□ -0.1
TRIM39-203ENST00000396547 AQRO60306 1485 aaKnown RBP eCLIP14.43□□□□□ -0.11e-6■■■■■ 29.2
TRIM39-203ENST00000396547 CUL7Q14999 1698 aa14.41□□□□□ -0.1
TRIM39-203ENST00000396547 SNAPC4Q5SXM2 1469 aa14.4□□□□□ -0.1
TRIM39-203ENST00000396547 SUPT16HQ9Y5B9 1047 aaKnown RBP14.39□□□□□ -0.11
TRIM39-203ENST00000396547 BCANQ96GW7 911 aa14.38□□□□□ -0.11
TRIM39-203ENST00000396547 RUSC2Q8N2Y8 1516 aa14.38□□□□□ -0.11
TRIM39-203ENST00000396547 TNIKQ9UKE5 1360 aa14.37□□□□□ -0.11
TRIM39-203ENST00000396547 SHROOM2Q13796 1616 aa14.36□□□□□ -0.11
TRIM39-203ENST00000396547 FHAD1B1AJZ9 1412 aa14.35□□□□□ -0.11
TRIM39-203ENST00000396547 NUP160Q12769 1436 aa14.34□□□□□ -0.11
TRIM39-203ENST00000396547 TDRD9Q8NDG6 1382 aaKnown RBP14.34□□□□□ -0.11
TRIM39-203ENST00000396547 GRIN2AQ12879 1464 aa14.31□□□□□ -0.12
TRIM39-203ENST00000396547 OSCARQ8IYS5 282 aa14.31□□□□□ -0.12
TRIM39-203ENST00000396547 TSHZ2Q9NRE2 1034 aa14.29□□□□□ -0.12
TRIM39-203ENST00000396547 KIF27Q86VH2 1401 aa14.29□□□□□ -0.12
TRIM39-203ENST00000396547 ITGAEP38570 1179 aa14.28□□□□□ -0.12
TRIM39-203ENST00000396547 RIMBP3CA6NJZ7 1639 aa14.28□□□□□ -0.12
TRIM39-203ENST00000396547 RIMBP3BA6NNM3 1639 aa14.28□□□□□ -0.12
TRIM39-203ENST00000396547 RIMBP3Q9UFD9 1639 aa14.28□□□□□ -0.12
TRIM39-203ENST00000396547 CEP170Q5SW79 1584 aa14.26□□□□□ -0.13
TRIM39-203ENST00000396547 KCNH8Q96L42 1107 aa14.26□□□□□ -0.13
TRIM39-203ENST00000396547 IGF1RP08069 1367 aa14.23□□□□□ -0.13
TRIM39-203ENST00000396547 ANP32EQ9BTT0 268 aa14.23□□□□□ -0.13
TRIM39-203ENST00000396547 ARHGEF11O15085 1522 aa14.22□□□□□ -0.13
TRIM39-203ENST00000396547 EEA1Q15075 1411 aa14.21□□□□□ -0.13
TRIM39-203ENST00000396547 GOLGA3Q08378 1498 aa14.2□□□□□ -0.14
TRIM39-203ENST00000396547 CLIP1P30622 1438 aa14.19□□□□□ -0.14
TRIM39-203ENST00000396547 FKBP8Q14318 412 aa14.18□□□□□ -0.14
TRIM39-203ENST00000396547 PRKCSHP14314 528 aaPredicted RBP14.18□□□□□ -0.14
TRIM39-203ENST00000396547 BCL11AQ9H165 835 aa14.16□□□□□ -0.14
TRIM39-203ENST00000396547 KIAA0586Q9BVV6 1533 aa14.14□□□□□ -0.15
TRIM39-203ENST00000396547 PRXQ9BXM0 1461 aa14.13□□□□□ -0.15
TRIM39-203ENST00000396547 CTTNBP2Q8WZ74 1663 aa14.12□□□□□ -0.15
TRIM39-203ENST00000396547 CHMP7Q8WUX9 453 aaPredicted RBP14.12□□□□□ -0.15
TRIM39-203ENST00000396547 ARAP1Q96P48 1450 aa14.11□□□□□ -0.15
TRIM39-203ENST00000396547 RAPGEF2Q9Y4G8 1499 aa14.1□□□□□ -0.15
TRIM39-203ENST00000396547 CLSPNQ9HAW4 1339 aa14.1□□□□□ -0.15
TRIM39-203ENST00000396547 DDX10Q13206 875 aaKnown RBP14.1□□□□□ -0.15
TRIM39-203ENST00000396547 HIRIP3Q9BW71 556 aaPredicted RBP14.09□□□□□ -0.15
TRIM39-203ENST00000396547 KANK4Q5T7N3 995 aaPredicted RBP14.09□□□□□ -0.15
TRIM39-203ENST00000396547 DHX57Q6P158 1386 aaKnown RBP14.09□□□□□ -0.15
TRIM39-203ENST00000396547 UGGT2Q9NYU1 1516 aa14.08□□□□□ -0.15
TRIM39-203ENST00000396547 CARMIL1Q5VZK9 1371 aa14.08□□□□□ -0.15
TRIM39-203ENST00000396547 KIF21BO75037 1637 aa14.07□□□□□ -0.16
TRIM39-203ENST00000396547 VPS8Q8N3P4 1428 aa14.07□□□□□ -0.16
TRIM39-203ENST00000396547 TRIM52Q96A61 297 aa14.06□□□□□ -0.16
TRIM39-203ENST00000396547 IQGAP2Q13576 1575 aa14.06□□□□□ -0.16
TRIM39-203ENST00000396547 NEFLP07196 543 aa14.05□□□□□ -0.16
TRIM39-203ENST00000396547 RBM19Q9Y4C8 960 aaKnown RBP14□□□□□ -0.17
TRIM39-203ENST00000396547 ERCC6L2Q5T890 1561 aa13.99□□□□□ -0.17
TRIM39-203ENST00000396547 SIN3AQ96ST3 1273 aa13.97□□□□□ -0.17
TRIM39-203ENST00000396547 UHRF1BP1LA0JNW5 1464 aa13.97□□□□□ -0.17
TRIM39-203ENST00000396547 SAMD9Q5K651 1589 aa13.96□□□□□ -0.17
TRIM39-203ENST00000396547 KIAA0556O60303 1618 aa13.96□□□□□ -0.17
TRIM39-203ENST00000396547 DISP1Q96F81 1524 aa13.95□□□□□ -0.18
TRIM39-203ENST00000396547 IRX6P78412 446 aaPredicted RBP13.95□□□□□ -0.18
TRIM39-203ENST00000396547 PRG4Q92954 1404 aaPredicted RBP13.95□□□□□ -0.18
TRIM39-203ENST00000396547 ATP1B4Q9UN42 357 aaPredicted RBP13.94□□□□□ -0.18
TRIM39-203ENST00000396547 FBLN2P98095 1184 aa13.93□□□□□ -0.18
TRIM39-203ENST00000396547 MAPKBP1O60336 1514 aa13.92□□□□□ -0.18
TRIM39-203ENST00000396547 JPH4Q96JJ6 628 aa13.91□□□□□ -0.18
TRIM39-203ENST00000396547 FAM50AQ14320 339 aaKnown RBP13.9□□□□□ -0.18
TRIM39-203ENST00000396547 ERICH6Q7L0X2 663 aa13.9□□□□□ -0.18
TRIM39-203ENST00000396547 ADCY10Q96PN6 1610 aa13.9□□□□□ -0.18
TRIM39-203ENST00000396547 CARMIL2Q6F5E8 1435 aa13.89□□□□□ -0.19
TRIM39-203ENST00000396547 EFCAB5A4FU69 1503 aa13.88□□□□□ -0.19
TRIM39-203ENST00000396547 ANP32CO43423 234 aa13.87□□□□□ -0.19
TRIM39-203ENST00000396547 ABCA8O94911 1581 aa13.85□□□□□ -0.19
TRIM39-203ENST00000396547 ABCC2Q92887 1545 aa13.84□□□□□ -0.19
TRIM39-203ENST00000396547 MSH5O43196 834 aa13.84□□□□□ -0.19
TRIM39-203ENST00000396547 CCNB3Q8WWL7 1395 aa13.84□□□□□ -0.19
TRIM39-203ENST00000396547 RAB3GAP2Q9H2M9 1393 aa13.84□□□□□ -0.19
TRIM39-203ENST00000396547 GLI2P10070 1586 aa13.82□□□□□ -0.2
TRIM39-203ENST00000396547 KDM5BQ9UGL1 1544 aa13.82□□□□□ -0.2
TRIM39-203ENST00000396547 KIF13AQ9H1H9 1805 aa13.81□□□□□ -0.2
TRIM39-203ENST00000396547 P3H3Q8IVL6 736 aa13.81□□□□□ -0.2
TRIM39-203ENST00000396547 HNRNPUQ00839 825 aaKnown RBP eCLIP13.79□□□□□ -0.2
TRIM39-203ENST00000396547 CDK11AQ9UQ88 783 aaPredicted RBP13.78□□□□□ -0.2
TRIM39-203ENST00000396547 PTPRGP23470 1445 aa13.77□□□□□ -0.21
TRIM39-203ENST00000396547 UACAQ9BZF9 1416 aa13.77□□□□□ -0.21
TRIM39-203ENST00000396547 PPP1R15AO75807 674 aaPredicted RBP13.77□□□□□ -0.21
TRIM39-203ENST00000396547 DIP2BQ9P265 1576 aa13.75□□□□□ -0.21
TRIM39-203ENST00000396547 ZCCHC11Q5TAX3 1644 aaKnown RBP13.75□□□□□ -0.21
TRIM39-203ENST00000396547 CYB5RLQ6IPT4 315 aa13.74□□□□□ -0.21
TRIM39-203ENST00000396547 ABCC10Q5T3U5 1492 aa13.73□□□□□ -0.21
TRIM39-203ENST00000396547 CNGB1Q14028 1251 aaPredicted RBP13.73□□□□□ -0.21
TRIM39-203ENST00000396547 RRBP1Q9P2E9 1410 aaKnown RBP13.73□□□□□ -0.21
TRIM39-203ENST00000396547 RAPGEF6Q8TEU7 1601 aa13.72□□□□□ -0.21
TRIM39-203ENST00000396547 PLB1Q6P1J6 1458 aa13.71□□□□□ -0.22
TRIM39-203ENST00000396547 MAP3K4Q9Y6R4 1608 aa13.7□□□□□ -0.22
TRIM39-203ENST00000396547 SETD5Q9C0A6 1442 aa13.69□□□□□ -0.22
TRIM39-203ENST00000396547 CCER2I3L3R5 266 aa13.68□□□□□ -0.22
TRIM39-203ENST00000396547 PPRC1Q5VV67 1664 aaKnown RBP13.67□□□□□ -0.22
TRIM39-203ENST00000396547 NBR1Q14596 966 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms