RNA–Protein interactions for RNA: ENST00000396535.7

SHC4-202, Transcript of SHC adaptor protein 4, humanhuman

TSL 1 (best) BASIC

Gene SHC4, Length 2,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-202ENST00000396535 SLC4A2P04920 1241 aa9.94□□□□□ -0.82
SHC4-202ENST00000396535 TRIM52Q96A61 297 aa9.94□□□□□ -0.82
SHC4-202ENST00000396535 BAZ1AQ9NRL2 1556 aaPredicted RBP9.94□□□□□ -0.82
SHC4-202ENST00000396535 CLIP1P30622 1438 aa9.94□□□□□ -0.82
SHC4-202ENST00000396535 VPS8Q8N3P4 1428 aa9.94□□□□□ -0.82
SHC4-202ENST00000396535 PABPN1Q86U42 306 aaKnown RBP eCLIP9.93□□□□□ -0.82
SHC4-202ENST00000396535 NBR1Q14596 966 aa9.9□□□□□ -0.82
SHC4-202ENST00000396535 CCER2I3L3R5 266 aa9.9□□□□□ -0.83
SHC4-202ENST00000396535 DDX10Q13206 875 aaKnown RBP9.9□□□□□ -0.83
SHC4-202ENST00000396535 IL27Q8NEV9 243 aa9.89□□□□□ -0.83
SHC4-202ENST00000396535 NOP58Q9Y2X3 529 aaKnown RBP9.89□□□□□ -0.83
SHC4-202ENST00000396535 HAP1P54257 671 aaPredicted RBP9.89□□□□□ -0.83
SHC4-202ENST00000396535 PPP1R15AO75807 674 aaPredicted RBP9.88□□□□□ -0.83
SHC4-202ENST00000396535 PAK3O75914 559 aaPredicted RBP9.87□□□□□ -0.83
SHC4-202ENST00000396535 PLCB2Q00722 1185 aa9.87□□□□□ -0.83
SHC4-202ENST00000396535 SMARCA4P51532 1647 aa9.87□□□□□ -0.83
SHC4-202ENST00000396535 CUX2O14529 1486 aa9.87□□□□□ -0.83
SHC4-202ENST00000396535 IRX6P78412 446 aaPredicted RBP9.86□□□□□ -0.83
SHC4-202ENST00000396535 TAOK2Q9UL54 1235 aa9.86□□□□□ -0.83
SHC4-202ENST00000396535 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.86□□□□□ -0.83
SHC4-202ENST00000396535 CEP164Q9UPV0 1460 aa9.85□□□□□ -0.83
SHC4-202ENST00000396535 KIF21BO75037 1637 aa9.85□□□□□ -0.83
SHC4-202ENST00000396535 ATF5Q9Y2D1 282 aaPredicted RBP9.84□□□□□ -0.83
SHC4-202ENST00000396535 TPRNQ4KMQ1 711 aa9.84□□□□□ -0.83
SHC4-202ENST00000396535 MAPKBP1O60336 1514 aa9.83□□□□□ -0.84
SHC4-202ENST00000396535 WDR97A6NE52 1622 aa9.82□□□□□ -0.84
SHC4-202ENST00000396535 ANP32CO43423 234 aa9.81□□□□□ -0.84
SHC4-202ENST00000396535 PPP4R2Q9NY27 417 aa9.81□□□□□ -0.84
SHC4-202ENST00000396535 FBLN2P98095 1184 aa9.81□□□□□ -0.84
SHC4-202ENST00000396535 RRBP1Q9P2E9 1410 aaKnown RBP9.81□□□□□ -0.84
SHC4-202ENST00000396535 BAZ1BQ9UIG0 1483 aaKnown RBP9.79□□□□□ -0.84
SHC4-202ENST00000396535 RTL5Q5HYW3 569 aaPredicted RBP9.79□□□□□ -0.84
SHC4-202ENST00000396535 TIMELESSQ9UNS1 1208 aa9.79□□□□□ -0.84
SHC4-202ENST00000396535 TOP2AP11388 1531 aaKnown RBP9.79□□□□□ -0.84
SHC4-202ENST00000396535 PEG3Q9GZU2 1588 aa9.79□□□□□ -0.84
SHC4-202ENST00000396535 SMARCA2P51531 1590 aa9.78□□□□□ -0.84
SHC4-202ENST00000396535 WASHC2AQ641Q2 1341 aa9.76□□□□□ -0.85
SHC4-202ENST00000396535 HNRNPUQ00839 825 aaKnown RBP eCLIP9.75□□□□□ -0.85
SHC4-202ENST00000396535 B4GALNT3Q6L9W6 998 aa9.75□□□□□ -0.85
SHC4-202ENST00000396535 IPO9Q96P70 1041 aaKnown RBP9.75□□□□□ -0.85
SHC4-202ENST00000396535 KDM2AQ9Y2K7 1162 aa9.75□□□□□ -0.85
SHC4-202ENST00000396535 CC2D2AQ9P2K1 1620 aa9.74□□□□□ -0.85
SHC4-202ENST00000396535 KANK4Q5T7N3 995 aaPredicted RBP9.74□□□□□ -0.85
SHC4-202ENST00000396535 RAB3GAP2Q9H2M9 1393 aa9.74□□□□□ -0.85
SHC4-202ENST00000396535 RAPGEF2Q9Y4G8 1499 aa9.74□□□□□ -0.85
SHC4-202ENST00000396535 C11orf95C9JLR9 678 aaPredicted RBP9.74□□□□□ -0.85
SHC4-202ENST00000396535 HIRIP3Q9BW71 556 aaPredicted RBP9.73□□□□□ -0.85
SHC4-202ENST00000396535 CCNB3Q8WWL7 1395 aa9.72□□□□□ -0.85
SHC4-202ENST00000396535 ANP32AP39687 249 aaKnown RBP9.71□□□□□ -0.86
SHC4-202ENST00000396535 WASHC2CQ9Y4E1 1318 aa9.7□□□□□ -0.86
SHC4-202ENST00000396535 ZBTB47Q9UFB7 747 aaPredicted RBP9.7□□□□□ -0.86
SHC4-202ENST00000396535 SIN3AQ96ST3 1273 aa9.7□□□□□ -0.86
SHC4-202ENST00000396535 ARAP1Q96P48 1450 aa9.7□□□□□ -0.86
SHC4-202ENST00000396535 RANGAP1P46060 587 aaPredicted RBP9.69□□□□□ -0.86
SHC4-202ENST00000396535 PKNOX2Q96KN3 472 aa9.68□□□□□ -0.86
SHC4-202ENST00000396535 ATAD2BQ9ULI0 1458 aa9.68□□□□□ -0.86
SHC4-202ENST00000396535 SYNJ1O43426 1573 aa9.67□□□□□ -0.86
SHC4-202ENST00000396535 TULP1O00294 542 aaPredicted RBP9.66□□□□□ -0.86
SHC4-202ENST00000396535 HMGXB3Q12766 1538 aa9.66□□□□□ -0.86
SHC4-202ENST00000396535 EIF5BO60841 1220 aaKnown RBP9.66□□□□□ -0.86
SHC4-202ENST00000396535 USP35Q9P2H5 1018 aa9.66□□□□□ -0.86
SHC4-202ENST00000396535 SETD5Q9C0A6 1442 aa9.64□□□□□ -0.87
SHC4-202ENST00000396535 BRPF3Q9ULD4 1205 aa9.64□□□□□ -0.87
SHC4-202ENST00000396535 NCAPD3P42695 1498 aa9.64□□□□□ -0.87
SHC4-202ENST00000396535 NEFMP07197 916 aa9.63□□□□□ -0.87
SHC4-202ENST00000396535 LAS1LQ9Y4W2 734 aaKnown RBP9.6□□□□□ -0.87
SHC4-202ENST00000396535 ZBED9Q6R2W3 1325 aa9.6□□□□□ -0.87
SHC4-202ENST00000396535 CCDC184Q52MB2 194 aa9.58□□□□□ -0.88
SHC4-202ENST00000396535 ERICH3Q5RHP9 1530 aa9.58□□□□□ -0.88
SHC4-202ENST00000396535 RSPH6AQ9H0K4 717 aa9.58□□□□□ -0.88
SHC4-202ENST00000396535 PPM1GO15355 546 aaPredicted RBP9.56□□□□□ -0.88
SHC4-202ENST00000396535 GSE1Q14687 1217 aa9.56□□□□□ -0.88
SHC4-202ENST00000396535 RNF123Q5XPI4 1314 aa9.55□□□□□ -0.88
SHC4-202ENST00000396535 AKNAQ7Z591 1439 aa9.55□□□□□ -0.88
SHC4-202ENST00000396535 PRXQ9BXM0 1461 aa9.54□□□□□ -0.88
SHC4-202ENST00000396535 DNAJC5BQ9UF47 199 aa9.54□□□□□ -0.88
SHC4-202ENST00000396535 FHAD1B1AJZ9 1412 aa9.54□□□□□ -0.88
SHC4-202ENST00000396535 NPM2Q86SE8 214 aaKnown RBP9.54□□□□□ -0.88
SHC4-202ENST00000396535 SMG6Q86US8 1419 aaKnown RBP9.53□□□□□ -0.88
SHC4-202ENST00000396535 TONSLQ96HA7 1378 aa9.53□□□□□ -0.88
SHC4-202ENST00000396535 FAM9BQ8IZU0 186 aa9.53□□□□□ -0.88
SHC4-202ENST00000396535 NCOA2Q15596 1464 aa9.53□□□□□ -0.88
SHC4-202ENST00000396535 RNF216Q9NWF9 866 aaPredicted RBP9.52□□□□□ -0.89
SHC4-202ENST00000396535 PRDM2Q13029 1718 aa9.52□□□□□ -0.89
SHC4-202ENST00000396535 NPM1P06748 294 aaKnown RBP eCLIP9.52□□□□□ -0.89
SHC4-202ENST00000396535 FAM43AQ8N2R8 423 aa9.52□□□□□ -0.89
SHC4-202ENST00000396535 CNTLNQ9NXG0 1405 aa9.51□□□□□ -0.89
SHC4-202ENST00000396535 KDM5BQ9UGL1 1544 aa9.51□□□□□ -0.89
SHC4-202ENST00000396535 FRAT1Q92837 279 aaPredicted RBP9.51□□□□□ -0.89
SHC4-202ENST00000396535 ARHGAP35Q9NRY4 1499 aa9.5□□□□□ -0.89
SHC4-202ENST00000396535 TIAM1Q13009 1591 aa9.5□□□□□ -0.89
SHC4-202ENST00000396535 PKD2Q13563 968 aa9.5□□□□□ -0.89
SHC4-202ENST00000396535 IFNLR1Q8IU57 520 aaPredicted RBP9.5□□□□□ -0.89
SHC4-202ENST00000396535 PRKRIP1Q9H875 184 aaPredicted RBP9.5□□□□□ -0.89
SHC4-202ENST00000396535 PHLDB1Q86UU1 1377 aa9.5□□□□□ -0.89
SHC4-202ENST00000396535 ZMYND15Q9H091 742 aa9.49□□□□□ -0.89
SHC4-202ENST00000396535 MRS2Q9HD23 443 aa9.49□□□□□ -0.89
SHC4-202ENST00000396535 MAP3K1Q13233 1512 aa9.49□□□□□ -0.89
SHC4-202ENST00000396535 PDE4AP27815 886 aa9.48□□□□□ -0.89
SHC4-202ENST00000396535 NFKBIBQ15653 356 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms