RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 CTTNBP2Q8WZ74 1663 aa34.86■■■■□ 3.17
FXN-202ENST00000396364 IQGAP2Q13576 1575 aa34.79■■■■□ 3.16
FXN-202ENST00000396364 DNAJC5Q9H3Z4 198 aa34.79■■■■□ 3.16
FXN-202ENST00000396364 UBTFP17480 764 aaKnown RBP34.73■■■■□ 3.15
FXN-202ENST00000396364 SHROOM2Q13796 1616 aa34.73■■■■□ 3.15
FXN-202ENST00000396364 JPH4Q96JJ6 628 aa34.71■■■■□ 3.15
FXN-202ENST00000396364 EHMT2Q96KQ7 1210 aa34.68■■■■□ 3.14
FXN-202ENST00000396364 ARHGEF11O15085 1522 aa34.61■■■■□ 3.13
FXN-202ENST00000396364 PRG4Q92954 1404 aaPredicted RBP34.6■■■■□ 3.13
FXN-202ENST00000396364 UGGT2Q9NYU1 1516 aa34.59■■■■□ 3.13
FXN-202ENST00000396364 CARMIL2Q6F5E8 1435 aa34.58■■■■□ 3.13
FXN-202ENST00000396364 RIMBP3CA6NJZ7 1639 aa34.55■■■■□ 3.12
FXN-202ENST00000396364 RIMBP3BA6NNM3 1639 aa34.55■■■■□ 3.12
FXN-202ENST00000396364 RIMBP3Q9UFD9 1639 aa34.55■■■■□ 3.12
FXN-202ENST00000396364 TNIKQ9UKE5 1360 aa34.49■■■■□ 3.11
FXN-202ENST00000396364 ERCC6L2Q5T890 1561 aa34.43■■■■□ 3.1
FXN-202ENST00000396364 KIAA0556O60303 1618 aa34.43■■■■□ 3.1
FXN-202ENST00000396364 DISP1Q96F81 1524 aa34.41■■■■□ 3.1
FXN-202ENST00000396364 EFCAB5A4FU69 1503 aa34.4■■■■□ 3.1
FXN-202ENST00000396364 RANGAP1P46060 587 aaPredicted RBP34.38■■■■□ 3.09
FXN-202ENST00000396364 SAMD9Q5K651 1589 aa34.37■■■■□ 3.09
FXN-202ENST00000396364 LOC105371045A0A1W2PR82 267 aa34.36■■■■□ 3.09
FXN-202ENST00000396364 ARAP1Q96P48 1450 aa34.33■■■■□ 3.09
FXN-202ENST00000396364 PTPRGP23470 1445 aa34.29■■■■□ 3.08
FXN-202ENST00000396364 CYB5RLQ6IPT4 315 aa34.26■■■■□ 3.08
FXN-202ENST00000396364 CLIP1P30622 1438 aa34.22■■■■□ 3.07
FXN-202ENST00000396364 P3H3Q8IVL6 736 aa34.22■■■■□ 3.07
FXN-202ENST00000396364 TTBK1Q5TCY1 1321 aaPredicted RBP34.2■■■■□ 3.07
FXN-202ENST00000396364 ARHGAP35Q9NRY4 1499 aa34.19■■■■□ 3.06
FXN-202ENST00000396364 CEP162Q5TB80 1403 aa34.18■■■■□ 3.06
FXN-202ENST00000396364 FHOD3Q2V2M9 1422 aa34.15■■■■□ 3.06
FXN-202ENST00000396364 FMN1Q68DA7 1419 aa34.09■■■■□ 3.05
FXN-202ENST00000396364 UACAQ9BZF9 1416 aa34.07■■■■□ 3.04
FXN-202ENST00000396364 UHRF1BP1LA0JNW5 1464 aa34.01■■■■□ 3.04
FXN-202ENST00000396364 ABCC2Q92887 1545 aa34■■■■□ 3.03
FXN-202ENST00000396364 ABCA8O94911 1581 aa33.98■■■■□ 3.03
FXN-202ENST00000396364 NPM1P06748 294 aaKnown RBP eCLIP33.98■■■■□ 3.03
FXN-202ENST00000396364 PLB1Q6P1J6 1458 aa33.98■■■■□ 3.03
FXN-202ENST00000396364 RAPGEF6Q8TEU7 1601 aa33.97■■■■□ 3.03
FXN-202ENST00000396364 ADCY10Q96PN6 1610 aa33.97■■■■□ 3.03
FXN-202ENST00000396364 HECW1Q76N89 1606 aa33.86■■■■□ 3.01
FXN-202ENST00000396364 KDM5BQ9UGL1 1544 aa33.82■■■■□ 3
FXN-202ENST00000396364 CASKIN1Q8WXD9 1431 aa33.81■■■■□ 3
FXN-202ENST00000396364 ATP1B4Q9UN42 357 aaPredicted RBP33.8■■■■□ 3
FXN-202ENST00000396364 FYCO1Q9BQS8 1478 aa33.79■■■■□ 3
FXN-202ENST00000396364 PCF11O94913 1555 aaKnown RBP33.78■■■■□ 3
FXN-202ENST00000396364 ZCCHC11Q5TAX3 1644 aaKnown RBP33.78■■■■□ 3
FXN-202ENST00000396364 NUP153P49790 1475 aaKnown RBP33.77■■■■□ 3
FXN-202ENST00000396364 VPS8Q8N3P4 1428 aa33.76■■■□□ 2.99
FXN-202ENST00000396364 MAPKBP1O60336 1514 aa33.73■■■□□ 2.99
FXN-202ENST00000396364 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.72■■■□□ 2.99
FXN-202ENST00000396364 HNRNPUL2Q1KMD3 747 aaKnown RBP33.72■■■□□ 2.99
FXN-202ENST00000396364 ATP10BO94823 1461 aa33.69■■■□□ 2.98
FXN-202ENST00000396364 CCDC18Q5T9S5 1454 aa33.69■■■□□ 2.98
FXN-202ENST00000396364 EPRSP07814 1512 aaKnown RBP33.67■■■□□ 2.98
FXN-202ENST00000396364 ARID3CA6NKF2 412 aa33.66■■■□□ 2.98
FXN-202ENST00000396364 CDK11AQ9UQ88 783 aaPredicted RBP33.63■■■□□ 2.97
FXN-202ENST00000396364 ASXL2Q76L83 1435 aa33.61■■■□□ 2.97
FXN-202ENST00000396364 CDK13Q14004 1512 aaKnown RBP33.58■■■□□ 2.97
FXN-202ENST00000396364 WDR7Q9Y4E6 1490 aa33.56■■■□□ 2.96
FXN-202ENST00000396364 LRRIQ1Q96JM4 1722 aa33.56■■■□□ 2.96
FXN-202ENST00000396364 PLEKHD1A6NEE1 506 aa33.56■■■□□ 2.96
FXN-202ENST00000396364 APLP2Q06481 763 aa33.53■■■□□ 2.96
FXN-202ENST00000396364 ABCC10Q5T3U5 1492 aa33.46■■■□□ 2.95
FXN-202ENST00000396364 TRHP20396 242 aaPredicted RBP33.45■■■□□ 2.95
FXN-202ENST00000396364 CFAP43Q8NDM7 1665 aa33.45■■■□□ 2.94
FXN-202ENST00000396364 MAP3K1Q13233 1512 aa33.43■■■□□ 2.94
FXN-202ENST00000396364 DIP2BQ9P265 1576 aa33.43■■■□□ 2.94
FXN-202ENST00000396364 TIAM1Q13009 1591 aa33.42■■■□□ 2.94
FXN-202ENST00000396364 KCNH8Q96L42 1107 aa33.4■■■□□ 2.94
FXN-202ENST00000396364 TROQ12816 1431 aaPredicted RBP33.39■■■□□ 2.94
FXN-202ENST00000396364 FAM69CQ0P6D2 419 aa33.38■■■□□ 2.93
FXN-202ENST00000396364 GLI2P10070 1586 aa33.38■■■□□ 2.93
FXN-202ENST00000396364 MTUS2Q5JR59 1369 aa33.37■■■□□ 2.93
FXN-202ENST00000396364 KIF13AQ9H1H9 1805 aa33.37■■■□□ 2.93
FXN-202ENST00000396364 KIF14Q15058 1648 aa33.35■■■□□ 2.93
FXN-202ENST00000396364 EHBP1L1Q8N3D4 1523 aa33.33■■■□□ 2.93
FXN-202ENST00000396364 ABCA9Q8IUA7 1624 aa33.28■■■□□ 2.92
FXN-202ENST00000396364 MAGI3Q5TCQ9 1506 aa33.27■■■□□ 2.92
FXN-202ENST00000396364 LRRC9Q6ZRR7 1453 aa33.25■■■□□ 2.91
FXN-202ENST00000396364 MAP3K4Q9Y6R4 1608 aa33.24■■■□□ 2.91
FXN-202ENST00000396364 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.21■■■□□ 2.91
FXN-202ENST00000396364 SUPT6HQ7KZ85 1726 aaKnown RBP33.2■■■□□ 2.91
FXN-202ENST00000396364 CD109Q6YHK3 1445 aa33.19■■■□□ 2.9
FXN-202ENST00000396364 TTC37Q6PGP7 1564 aa33.15■■■□□ 2.9
FXN-202ENST00000396364 TSPOAP1O95153 1857 aa33.14■■■□□ 2.9
FXN-202ENST00000396364 TEX14Q8IWB6 1497 aa33.14■■■□□ 2.9
FXN-202ENST00000396364 MYO5CQ9NQX4 1742 aa33.14■■■□□ 2.89
FXN-202ENST00000396364 KANK4Q5T7N3 995 aaPredicted RBP33.12■■■□□ 2.89
FXN-202ENST00000396364 NCOA2Q15596 1464 aa33.07■■■□□ 2.88
FXN-202ENST00000396364 CCNB3Q8WWL7 1395 aa33.07■■■□□ 2.88
FXN-202ENST00000396364 ARAP3Q8WWN8 1544 aa33.06■■■□□ 2.88
FXN-202ENST00000396364 PLCH2O75038 1416 aa33.05■■■□□ 2.88
FXN-202ENST00000396364 CFAP74Q9C0B2 1584 aa33.04■■■□□ 2.88
FXN-202ENST00000396364 ITSN2Q9NZM3 1697 aa33.04■■■□□ 2.88
FXN-202ENST00000396364 PPRC1Q5VV67 1664 aaKnown RBP33.02■■■□□ 2.88
FXN-202ENST00000396364 PREX2Q70Z35 1606 aa33.02■■■□□ 2.88
FXN-202ENST00000396364 CDC42BPAQ5VT25 1732 aa33.01■■■□□ 2.87
FXN-202ENST00000396364 PHLDB1Q86UU1 1377 aa32.99■■■□□ 2.87
FXN-202ENST00000396364 ARHGAP5Q13017 1502 aa32.99■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms