RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 RAPGEF2Q9Y4G8 1499 aa16.72■□□□□ 0.27
THUMPD1-202ENST00000396083 RIMBP3CA6NJZ7 1639 aa16.72■□□□□ 0.27
THUMPD1-202ENST00000396083 RIMBP3BA6NNM3 1639 aa16.72■□□□□ 0.27
THUMPD1-202ENST00000396083 RIMBP3Q9UFD9 1639 aa16.72■□□□□ 0.27
THUMPD1-202ENST00000396083 JPH4Q96JJ6 628 aa16.7■□□□□ 0.26
THUMPD1-202ENST00000396083 ERCC6L2Q5T890 1561 aa16.68■□□□□ 0.26
THUMPD1-202ENST00000396083 PRXQ9BXM0 1461 aa16.66■□□□□ 0.26
THUMPD1-202ENST00000396083 PRG4Q92954 1404 aaPredicted RBP16.64■□□□□ 0.25
THUMPD1-202ENST00000396083 EEA1Q15075 1411 aa16.64■□□□□ 0.25
THUMPD1-202ENST00000396083 UBTFP17480 764 aaKnown RBP16.63■□□□□ 0.25
THUMPD1-202ENST00000396083 KIAA0586Q9BVV6 1533 aa16.62■□□□□ 0.25
THUMPD1-202ENST00000396083 ARAP1Q96P48 1450 aa16.61■□□□□ 0.25
THUMPD1-202ENST00000396083 P3H3Q8IVL6 736 aa16.6■□□□□ 0.25
THUMPD1-202ENST00000396083 IQGAP2Q13576 1575 aa16.57■□□□□ 0.24
THUMPD1-202ENST00000396083 SHROOM2Q13796 1616 aa16.55■□□□□ 0.24
THUMPD1-202ENST00000396083 CTTNBP2Q8WZ74 1663 aa16.52■□□□□ 0.24
THUMPD1-202ENST00000396083 LOC105371045A0A1W2PR82 267 aa16.51■□□□□ 0.23
THUMPD1-202ENST00000396083 KIF21BO75037 1637 aa16.49■□□□□ 0.23
THUMPD1-202ENST00000396083 GOLGA3Q08378 1498 aa16.48■□□□□ 0.23
THUMPD1-202ENST00000396083 CARMIL2Q6F5E8 1435 aa16.47■□□□□ 0.23
THUMPD1-202ENST00000396083 ARID3CA6NKF2 412 aa16.46■□□□□ 0.23
THUMPD1-202ENST00000396083 DISP1Q96F81 1524 aa16.46■□□□□ 0.23
THUMPD1-202ENST00000396083 PTPRGP23470 1445 aa16.44■□□□□ 0.22
THUMPD1-202ENST00000396083 UGGT2Q9NYU1 1516 aa16.42■□□□□ 0.22
THUMPD1-202ENST00000396083 TRHP20396 242 aaPredicted RBP16.42■□□□□ 0.22
THUMPD1-202ENST00000396083 TNIKQ9UKE5 1360 aa16.41■□□□□ 0.22
THUMPD1-202ENST00000396083 KIAA0556O60303 1618 aa16.4■□□□□ 0.22
THUMPD1-202ENST00000396083 FHOD3Q2V2M9 1422 aa16.38■□□□□ 0.21
THUMPD1-202ENST00000396083 ATP1B4Q9UN42 357 aaPredicted RBP16.36■□□□□ 0.21
THUMPD1-202ENST00000396083 NPM1P06748 294 aaKnown RBP eCLIP16.35■□□□□ 0.21
THUMPD1-202ENST00000396083 PLB1Q6P1J6 1458 aa16.35■□□□□ 0.21
THUMPD1-202ENST00000396083 ADCY10Q96PN6 1610 aa16.32■□□□□ 0.2
THUMPD1-202ENST00000396083 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.31■□□□□ 0.2
THUMPD1-202ENST00000396083 HNRNPUL2Q1KMD3 747 aaKnown RBP16.31■□□□□ 0.2
THUMPD1-202ENST00000396083 UACAQ9BZF9 1416 aa16.3■□□□□ 0.2
THUMPD1-202ENST00000396083 SAMD9Q5K651 1589 aa16.29■□□□□ 0.2
THUMPD1-202ENST00000396083 ARHGAP35Q9NRY4 1499 aa16.27■□□□□ 0.2
THUMPD1-202ENST00000396083 CLIP1P30622 1438 aa16.25■□□□□ 0.19
THUMPD1-202ENST00000396083 ABCC2Q92887 1545 aa16.23■□□□□ 0.19
THUMPD1-202ENST00000396083 KCNH8Q96L42 1107 aa16.22■□□□□ 0.19
THUMPD1-202ENST00000396083 EFCAB5A4FU69 1503 aa16.21■□□□□ 0.19
THUMPD1-202ENST00000396083 CEP162Q5TB80 1403 aa16.21■□□□□ 0.19
THUMPD1-202ENST00000396083 FAM69CQ0P6D2 419 aa16.2■□□□□ 0.18
THUMPD1-202ENST00000396083 ABCA8O94911 1581 aa16.18■□□□□ 0.18
THUMPD1-202ENST00000396083 ASXL2Q76L83 1435 aa16.17■□□□□ 0.18
THUMPD1-202ENST00000396083 ZCCHC11Q5TAX3 1644 aaKnown RBP16.16■□□□□ 0.18
THUMPD1-202ENST00000396083 RAPGEF6Q8TEU7 1601 aa16.16■□□□□ 0.18
THUMPD1-202ENST00000396083 UHRF1BP1LA0JNW5 1464 aa16.16■□□□□ 0.18
THUMPD1-202ENST00000396083 KDM5BQ9UGL1 1544 aa16.15■□□□□ 0.18
THUMPD1-202ENST00000396083 NUP153P49790 1475 aaKnown RBP16.14■□□□□ 0.17
THUMPD1-202ENST00000396083 FMN1Q68DA7 1419 aa16.13■□□□□ 0.17
THUMPD1-202ENST00000396083 ATP10BO94823 1461 aa16.13■□□□□ 0.17
THUMPD1-202ENST00000396083 CDK13Q14004 1512 aaKnown RBP16.12■□□□□ 0.17
THUMPD1-202ENST00000396083 TSPOAP1O95153 1857 aa16.1■□□□□ 0.17
THUMPD1-202ENST00000396083 MAPKBP1O60336 1514 aa16.1■□□□□ 0.17
THUMPD1-202ENST00000396083 KIF13AQ9H1H9 1805 aa16.09■□□□□ 0.17
THUMPD1-202ENST00000396083 PCF11O94913 1555 aaKnown RBP16.08■□□□□ 0.16
THUMPD1-202ENST00000396083 ABCC10Q5T3U5 1492 aa16.08■□□□□ 0.16
THUMPD1-202ENST00000396083 PLEKHD1A6NEE1 506 aa16.06■□□□□ 0.16
THUMPD1-202ENST00000396083 DIP2BQ9P265 1576 aa16.06■□□□□ 0.16
THUMPD1-202ENST00000396083 WDR7Q9Y4E6 1490 aa16.06■□□□□ 0.16
THUMPD1-202ENST00000396083 EPRSP07814 1512 aaKnown RBP16.04■□□□□ 0.16
THUMPD1-202ENST00000396083 LRRIQ1Q96JM4 1722 aa16.03■□□□□ 0.16
THUMPD1-202ENST00000396083 HECW1Q76N89 1606 aa16.03■□□□□ 0.16
THUMPD1-202ENST00000396083 CASKIN1Q8WXD9 1431 aa16.01■□□□□ 0.15
THUMPD1-202ENST00000396083 CDK11AQ9UQ88 783 aaPredicted RBP15.98■□□□□ 0.15
THUMPD1-202ENST00000396083 FYCO1Q9BQS8 1478 aa15.96■□□□□ 0.15
THUMPD1-202ENST00000396083 CD109Q6YHK3 1445 aa15.95■□□□□ 0.14
THUMPD1-202ENST00000396083 VPS8Q8N3P4 1428 aa15.95■□□□□ 0.14
THUMPD1-202ENST00000396083 PPARGC1BQ86YN6 1023 aaKnown RBP15.93■□□□□ 0.14
THUMPD1-202ENST00000396083 MAGI3Q5TCQ9 1506 aa15.92■□□□□ 0.14
THUMPD1-202ENST00000396083 MTUS2Q5JR59 1369 aa15.91■□□□□ 0.14
THUMPD1-202ENST00000396083 KIF14Q15058 1648 aa15.9■□□□□ 0.14
THUMPD1-202ENST00000396083 CCDC18Q5T9S5 1454 aa15.9■□□□□ 0.14
THUMPD1-202ENST00000396083 APLP2Q06481 763 aa15.89■□□□□ 0.13
THUMPD1-202ENST00000396083 KANK4Q5T7N3 995 aaPredicted RBP15.89■□□□□ 0.13
THUMPD1-202ENST00000396083 GLI2P10070 1586 aa15.89■□□□□ 0.13
THUMPD1-202ENST00000396083 TTC37Q6PGP7 1564 aa15.89■□□□□ 0.13
THUMPD1-202ENST00000396083 MAP3K4Q9Y6R4 1608 aa15.88■□□□□ 0.13
THUMPD1-202ENST00000396083 TROQ12816 1431 aaPredicted RBP15.88■□□□□ 0.13
THUMPD1-202ENST00000396083 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.88■□□□□ 0.135e-6■■■■□ 19.7
THUMPD1-202ENST00000396083 PPRC1Q5VV67 1664 aaKnown RBP15.88■□□□□ 0.13
THUMPD1-202ENST00000396083 ZNF777Q9ULD5 760 aaPredicted RBP15.86■□□□□ 0.13
THUMPD1-202ENST00000396083 CFAP43Q8NDM7 1665 aa15.85■□□□□ 0.13
THUMPD1-202ENST00000396083 ABCA9Q8IUA7 1624 aa15.85■□□□□ 0.13
THUMPD1-202ENST00000396083 RAPGEF3O95398 923 aa15.83■□□□□ 0.13
THUMPD1-202ENST00000396083 COL17A1Q9UMD9 1497 aaPredicted RBP15.83■□□□□ 0.13
THUMPD1-202ENST00000396083 KDM6BO15054 1643 aa15.82■□□□□ 0.12
THUMPD1-202ENST00000396083 TEX14Q8IWB6 1497 aa15.81■□□□□ 0.12
THUMPD1-202ENST00000396083 TIAM1Q13009 1591 aa15.81■□□□□ 0.12
THUMPD1-202ENST00000396083 FANCAO15360 1455 aa15.79■□□□□ 0.12
THUMPD1-202ENST00000396083 ARHGAP5Q13017 1502 aa15.78■□□□□ 0.12
THUMPD1-202ENST00000396083 CCNB3Q8WWL7 1395 aa15.76■□□□□ 0.11
THUMPD1-202ENST00000396083 EFCAB2Q5VUJ9 269 aa15.76■□□□□ 0.11
THUMPD1-202ENST00000396083 CFDP1Q9UEE9 299 aaPredicted RBP15.76■□□□□ 0.11
THUMPD1-202ENST00000396083 MYO5CQ9NQX4 1742 aa15.76■□□□□ 0.11
THUMPD1-202ENST00000396083 PLCH2O75038 1416 aa15.76■□□□□ 0.11
THUMPD1-202ENST00000396083 LRRC9Q6ZRR7 1453 aa15.76■□□□□ 0.11
THUMPD1-202ENST00000396083 MYT1LQ9UL68 1186 aa15.75■□□□□ 0.11
THUMPD1-202ENST00000396083 ZNF644Q9H582 1327 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms