RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 KIF21BO75037 1637 aa22.97■■□□□ 1.27
RTFDC1-203ENST00000395881 TNIKQ9UKE5 1360 aa22.95■■□□□ 1.26
RTFDC1-203ENST00000395881 GOLGA3Q08378 1498 aa22.95■■□□□ 1.26
RTFDC1-203ENST00000395881 CARMIL1Q5VZK9 1371 aa22.93■■□□□ 1.26
RTFDC1-203ENST00000395881 ARAP1Q96P48 1450 aa22.92■■□□□ 1.26
RTFDC1-203ENST00000395881 CYB5RLQ6IPT4 315 aa22.89■■□□□ 1.26
RTFDC1-203ENST00000395881 SHROOM2Q13796 1616 aa22.88■■□□□ 1.25
RTFDC1-203ENST00000395881 ERCC6L2Q5T890 1561 aa22.85■■□□□ 1.25
RTFDC1-203ENST00000395881 JPH4Q96JJ6 628 aa22.8■■□□□ 1.24
RTFDC1-203ENST00000395881 EHMT2Q96KQ7 1210 aa22.8■■□□□ 1.24
RTFDC1-203ENST00000395881 KIAA0586Q9BVV6 1533 aa22.8■■□□□ 1.24
RTFDC1-203ENST00000395881 CEP162Q5TB80 1403 aa22.79■■□□□ 1.24
RTFDC1-203ENST00000395881 RAPGEF2Q9Y4G8 1499 aa22.78■■□□□ 1.24
RTFDC1-203ENST00000395881 PRG4Q92954 1404 aaPredicted RBP22.76■■□□□ 1.23
RTFDC1-203ENST00000395881 PRXQ9BXM0 1461 aa22.74■■□□□ 1.23
RTFDC1-203ENST00000395881 TRIM26Q12899 539 aaPredicted RBP22.73■■□□□ 1.23
RTFDC1-203ENST00000395881 UBTFP17480 764 aaKnown RBP22.72■■□□□ 1.23
RTFDC1-203ENST00000395881 PCGF6Q9BYE7 350 aa22.68■■□□□ 1.22
RTFDC1-203ENST00000395881 IQGAP2Q13576 1575 aa22.66■■□□□ 1.22
RTFDC1-203ENST00000395881 CTTNBP2Q8WZ74 1663 aa22.6■■□□□ 1.21
RTFDC1-203ENST00000395881 CLIP1P30622 1438 aa22.56■■□□□ 1.2
RTFDC1-203ENST00000395881 UGGT2Q9NYU1 1516 aa22.54■■□□□ 1.2
RTFDC1-203ENST00000395881 DISP1Q96F81 1524 aa22.53■■□□□ 1.2
RTFDC1-203ENST00000395881 CARMIL2Q6F5E8 1435 aa22.53■■□□□ 1.2
RTFDC1-203ENST00000395881 PTPRGP23470 1445 aa22.48■■□□□ 1.19
RTFDC1-203ENST00000395881 KIAA0556O60303 1618 aa22.45■■□□□ 1.18
RTFDC1-203ENST00000395881 TTBK1Q5TCY1 1321 aaPredicted RBP22.44■■□□□ 1.18
RTFDC1-203ENST00000395881 ADCY10Q96PN6 1610 aa22.44■■□□□ 1.18
RTFDC1-203ENST00000395881 VPS8Q8N3P4 1428 aa22.44■■□□□ 1.18
RTFDC1-203ENST00000395881 TRHP20396 242 aaPredicted RBP22.42■■□□□ 1.18
RTFDC1-203ENST00000395881 HRCP23327 699 aa22.38■■□□□ 1.17
RTFDC1-203ENST00000395881 NPM1P06748 294 aaKnown RBP eCLIP22.33■■□□□ 1.16
RTFDC1-203ENST00000395881 UACAQ9BZF9 1416 aa22.32■■□□□ 1.16
RTFDC1-203ENST00000395881 UHRF1BP1LA0JNW5 1464 aa22.3■■□□□ 1.16
RTFDC1-203ENST00000395881 SAMD9Q5K651 1589 aa22.3■■□□□ 1.16
RTFDC1-203ENST00000395881 P3H3Q8IVL6 736 aa22.29■■□□□ 1.16
RTFDC1-203ENST00000395881 ABCC2Q92887 1545 aa22.28■■□□□ 1.16
RTFDC1-203ENST00000395881 MAPKBP1O60336 1514 aa22.27■■□□□ 1.16
RTFDC1-203ENST00000395881 RANGAP1P46060 587 aaPredicted RBP22.27■■□□□ 1.16
RTFDC1-203ENST00000395881 PLB1Q6P1J6 1458 aa22.25■■□□□ 1.15
RTFDC1-203ENST00000395881 KIF13AQ9H1H9 1805 aa22.24■■□□□ 1.15
RTFDC1-203ENST00000395881 ARHGAP35Q9NRY4 1499 aa22.24■■□□□ 1.15
RTFDC1-203ENST00000395881 ABCA8O94911 1581 aa22.23■■□□□ 1.15
RTFDC1-203ENST00000395881 KDM5BQ9UGL1 1544 aa22.21■■□□□ 1.15
RTFDC1-203ENST00000395881 PPARGC1BQ86YN6 1023 aaKnown RBP22.19■■□□□ 1.14
RTFDC1-203ENST00000395881 ABCC10Q5T3U5 1492 aa22.18■■□□□ 1.14
RTFDC1-203ENST00000395881 ZCCHC11Q5TAX3 1644 aaKnown RBP22.17■■□□□ 1.14
RTFDC1-203ENST00000395881 APLP2Q06481 763 aa22.16■■□□□ 1.14
RTFDC1-203ENST00000395881 FHOD3Q2V2M9 1422 aa22.16■■□□□ 1.14
RTFDC1-203ENST00000395881 EFCAB5A4FU69 1503 aa22.16■■□□□ 1.14
RTFDC1-203ENST00000395881 DIP2BQ9P265 1576 aa22.16■■□□□ 1.14
RTFDC1-203ENST00000395881 ASXL2Q76L83 1435 aa22.14■■□□□ 1.14
RTFDC1-203ENST00000395881 FAM69CQ0P6D2 419 aa22.14■■□□□ 1.13
RTFDC1-203ENST00000395881 RAPGEF6Q8TEU7 1601 aa22.09■■□□□ 1.13
RTFDC1-203ENST00000395881 MAP3K1Q13233 1512 aa22.08■■□□□ 1.13
RTFDC1-203ENST00000395881 ZEB1P37275 1124 aaPredicted RBP22.07■■□□□ 1.12
RTFDC1-203ENST00000395881 ARID3CA6NKF2 412 aa22.05■■□□□ 1.12
RTFDC1-203ENST00000395881 ATP10BO94823 1461 aa22.05■■□□□ 1.12
RTFDC1-203ENST00000395881 GLI2P10070 1586 aa22.02■■□□□ 1.12
RTFDC1-203ENST00000395881 EPRSP07814 1512 aaKnown RBP22.02■■□□□ 1.12
RTFDC1-203ENST00000395881 NUP153P49790 1475 aaKnown RBP22.01■■□□□ 1.11
RTFDC1-203ENST00000395881 TSPOAP1O95153 1857 aa22.01■■□□□ 1.11
RTFDC1-203ENST00000395881 WDR7Q9Y4E6 1490 aa22.01■■□□□ 1.11
RTFDC1-203ENST00000395881 FMN1Q68DA7 1419 aa21.95■■□□□ 1.1
RTFDC1-203ENST00000395881 KCNH8Q96L42 1107 aa21.94■■□□□ 1.1
RTFDC1-203ENST00000395881 PPRC1Q5VV67 1664 aaKnown RBP21.94■■□□□ 1.1
RTFDC1-203ENST00000395881 TIAM1Q13009 1591 aa21.93■■□□□ 1.1
RTFDC1-203ENST00000395881 MAP3K4Q9Y6R4 1608 aa21.93■■□□□ 1.1
RTFDC1-203ENST00000395881 FYCO1Q9BQS8 1478 aa21.92■■□□□ 1.1
RTFDC1-203ENST00000395881 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.91■■□□□ 1.1
RTFDC1-203ENST00000395881 HNRNPUL2Q1KMD3 747 aaKnown RBP21.91■■□□□ 1.1
RTFDC1-203ENST00000395881 CFAP43Q8NDM7 1665 aa21.9■■□□□ 1.1
RTFDC1-203ENST00000395881 CASKIN1Q8WXD9 1431 aa21.9■■□□□ 1.1
RTFDC1-203ENST00000395881 PCF11O94913 1555 aaKnown RBP21.89■■□□□ 1.09
RTFDC1-203ENST00000395881 CDK13Q14004 1512 aaKnown RBP21.87■■□□□ 1.09
RTFDC1-203ENST00000395881 HECW1Q76N89 1606 aa21.86■■□□□ 1.09
RTFDC1-203ENST00000395881 KANK4Q5T7N3 995 aaPredicted RBP21.86■■□□□ 1.09
RTFDC1-203ENST00000395881 ATP1B4Q9UN42 357 aaPredicted RBP21.85■■□□□ 1.09
RTFDC1-203ENST00000395881 RRBP1Q9P2E9 1410 aaKnown RBP21.84■■□□□ 1.09
RTFDC1-203ENST00000395881 LRRIQ1Q96JM4 1722 aa21.83■■□□□ 1.09
RTFDC1-203ENST00000395881 CD109Q6YHK3 1445 aa21.82■■□□□ 1.08
RTFDC1-203ENST00000395881 LRRC9Q6ZRR7 1453 aa21.82■■□□□ 1.08
RTFDC1-203ENST00000395881 PLEKHD1A6NEE1 506 aa21.82■■□□□ 1.08
RTFDC1-203ENST00000395881 KDM6BO15054 1643 aa21.8■■□□□ 1.08
RTFDC1-203ENST00000395881 ABCA9Q8IUA7 1624 aa21.8■■□□□ 1.08
RTFDC1-203ENST00000395881 MAGI3Q5TCQ9 1506 aa21.79■■□□□ 1.08
RTFDC1-203ENST00000395881 TEX14Q8IWB6 1497 aa21.78■■□□□ 1.08
RTFDC1-203ENST00000395881 COL17A1Q9UMD9 1497 aaPredicted RBP21.74■■□□□ 1.07
RTFDC1-203ENST00000395881 CCER1Q8TC90 406 aaPredicted RBP21.71■■□□□ 1.07
RTFDC1-203ENST00000395881 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.71■■□□□ 1.07
RTFDC1-203ENST00000395881 CCNB3Q8WWL7 1395 aa21.7■■□□□ 1.06
RTFDC1-203ENST00000395881 CDK11AQ9UQ88 783 aaPredicted RBP21.7■■□□□ 1.06
RTFDC1-203ENST00000395881 CCDC18Q5T9S5 1454 aa21.69■■□□□ 1.06
RTFDC1-203ENST00000395881 TTC37Q6PGP7 1564 aa21.68■■□□□ 1.06
RTFDC1-203ENST00000395881 TROQ12816 1431 aaPredicted RBP21.66■■□□□ 1.06
RTFDC1-203ENST00000395881 KIF14Q15058 1648 aa21.65■■□□□ 1.06
RTFDC1-203ENST00000395881 ARAP3Q8WWN8 1544 aa21.6■■□□□ 1.05
RTFDC1-203ENST00000395881 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.6■■□□□ 1.05
RTFDC1-203ENST00000395881 NEO1Q92859 1461 aa21.6■■□□□ 1.05
RTFDC1-203ENST00000395881 PHLDB1Q86UU1 1377 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms