RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 RANGAP1P46060 587 aaPredicted RBP32.55■■■□□ 2.8
VCPKMT-202ENST00000395860 FBLN2P98095 1184 aa32.5■■■□□ 2.79
VCPKMT-202ENST00000395860 CHD1O14646 1710 aa32.46■■■□□ 2.79
VCPKMT-202ENST00000395860 IQGAP2Q13576 1575 aa32.39■■■□□ 2.78
VCPKMT-202ENST00000395860 CEP170Q5SW79 1584 aa32.39■■■□□ 2.78
VCPKMT-202ENST00000395860 ARHGAP35Q9NRY4 1499 aa32.36■■■□□ 2.77
VCPKMT-202ENST00000395860 KIAA0586Q9BVV6 1533 aa32.35■■■□□ 2.77
VCPKMT-202ENST00000395860 NUP160Q12769 1436 aa32.34■■■□□ 2.77
VCPKMT-202ENST00000395860 EFCAB5A4FU69 1503 aa32.31■■■□□ 2.76
VCPKMT-202ENST00000395860 ARAP1Q96P48 1450 aa32.29■■■□□ 2.76
VCPKMT-202ENST00000395860 SAMD9Q5K651 1589 aa32.24■■■□□ 2.75
VCPKMT-202ENST00000395860 VPS8Q8N3P4 1428 aa32.22■■■□□ 2.75
VCPKMT-202ENST00000395860 UGGT2Q9NYU1 1516 aa32.21■■■□□ 2.75
VCPKMT-202ENST00000395860 P3H3Q8IVL6 736 aa32.17■■■□□ 2.74
VCPKMT-202ENST00000395860 FHOD3Q2V2M9 1422 aa32.13■■■□□ 2.73
VCPKMT-202ENST00000395860 KIAA0556O60303 1618 aa32.07■■■□□ 2.72
VCPKMT-202ENST00000395860 JPH4Q96JJ6 628 aa32.07■■■□□ 2.72
VCPKMT-202ENST00000395860 DISP1Q96F81 1524 aa32.05■■■□□ 2.72
VCPKMT-202ENST00000395860 CLASP1Q7Z460 1538 aa32.02■■■□□ 2.72
VCPKMT-202ENST00000395860 FMN1Q68DA7 1419 aa32■■■□□ 2.71
VCPKMT-202ENST00000395860 SHROOM2Q13796 1616 aa32■■■□□ 2.71
VCPKMT-202ENST00000395860 CARMIL2Q6F5E8 1435 aa31.97■■■□□ 2.71
VCPKMT-202ENST00000395860 PCF11O94913 1555 aaKnown RBP31.95■■■□□ 2.7
VCPKMT-202ENST00000395860 APLP2Q06481 763 aa31.91■■■□□ 2.7
VCPKMT-202ENST00000395860 PRG4Q92954 1404 aaPredicted RBP31.91■■■□□ 2.7
VCPKMT-202ENST00000395860 OSCARQ8IYS5 282 aa31.87■■■□□ 2.69
VCPKMT-202ENST00000395860 CASKIN1Q8WXD9 1431 aa31.87■■■□□ 2.69
VCPKMT-202ENST00000395860 FYCO1Q9BQS8 1478 aa31.87■■■□□ 2.69
VCPKMT-202ENST00000395860 PPARGC1BQ86YN6 1023 aaKnown RBP31.84■■■□□ 2.69
VCPKMT-202ENST00000395860 TTBK1Q5TCY1 1321 aaPredicted RBP31.81■■■□□ 2.68
VCPKMT-202ENST00000395860 ATP1B4Q9UN42 357 aaPredicted RBP31.81■■■□□ 2.68
VCPKMT-202ENST00000395860 ERCC6L2Q5T890 1561 aa31.76■■■□□ 2.67
VCPKMT-202ENST00000395860 HECW1Q76N89 1606 aa31.75■■■□□ 2.67
VCPKMT-202ENST00000395860 TIAM1Q13009 1591 aa31.74■■■□□ 2.67
VCPKMT-202ENST00000395860 CFAP43Q8NDM7 1665 aa31.74■■■□□ 2.67
VCPKMT-202ENST00000395860 MAP3K1Q13233 1512 aa31.74■■■□□ 2.67
VCPKMT-202ENST00000395860 LRRIQ1Q96JM4 1722 aa31.73■■■□□ 2.67
VCPKMT-202ENST00000395860 RAPGEF6Q8TEU7 1601 aa31.72■■■□□ 2.67
VCPKMT-202ENST00000395860 PTPRGP23470 1445 aa31.67■■■□□ 2.66
VCPKMT-202ENST00000395860 PLB1Q6P1J6 1458 aa31.64■■■□□ 2.66
VCPKMT-202ENST00000395860 CCDC18Q5T9S5 1454 aa31.63■■■□□ 2.65
VCPKMT-202ENST00000395860 ABCA8O94911 1581 aa31.62■■■□□ 2.65
VCPKMT-202ENST00000395860 KANK4Q5T7N3 995 aaPredicted RBP31.61■■■□□ 2.65
VCPKMT-202ENST00000395860 EPRSP07814 1512 aaKnown RBP31.59■■■□□ 2.65
VCPKMT-202ENST00000395860 NUP153P49790 1475 aaKnown RBP31.58■■■□□ 2.65
VCPKMT-202ENST00000395860 LRRC9Q6ZRR7 1453 aa31.57■■■□□ 2.64
VCPKMT-202ENST00000395860 TRIM26Q12899 539 aaPredicted RBP31.55■■■□□ 2.64
VCPKMT-202ENST00000395860 CDK13Q14004 1512 aaKnown RBP31.53■■■□□ 2.64
VCPKMT-202ENST00000395860 ARID3CA6NKF2 412 aa31.51■■■□□ 2.63
VCPKMT-202ENST00000395860 UACAQ9BZF9 1416 aa31.49■■■□□ 2.63
VCPKMT-202ENST00000395860 MTUS2Q5JR59 1369 aa31.45■■■□□ 2.62
VCPKMT-202ENST00000395860 EHBP1L1Q8N3D4 1523 aa31.43■■■□□ 2.62
VCPKMT-202ENST00000395860 ABCC2Q92887 1545 aa31.43■■■□□ 2.62
VCPKMT-202ENST00000395860 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.42■■■□□ 2.62
VCPKMT-202ENST00000395860 HNRNPUL2Q1KMD3 747 aaKnown RBP31.42■■■□□ 2.62
VCPKMT-202ENST00000395860 PCGF6Q9BYE7 350 aa31.42■■■□□ 2.62
VCPKMT-202ENST00000395860 MAGI3Q5TCQ9 1506 aa31.4■■■□□ 2.62
VCPKMT-202ENST00000395860 ATP10BO94823 1461 aa31.37■■■□□ 2.61
VCPKMT-202ENST00000395860 ARHGEF11O15085 1522 aa31.37■■■□□ 2.61
VCPKMT-202ENST00000395860 SUPT6HQ7KZ85 1726 aaKnown RBP31.36■■■□□ 2.61
VCPKMT-202ENST00000395860 UHRF1BP1LA0JNW5 1464 aa31.36■■■□□ 2.61
VCPKMT-202ENST00000395860 CDK11AQ9UQ88 783 aaPredicted RBP31.35■■■□□ 2.61
VCPKMT-202ENST00000395860 ADCY10Q96PN6 1610 aa31.29■■■□□ 2.6
VCPKMT-202ENST00000395860 RIMBP3CA6NJZ7 1639 aa31.27■■■□□ 2.6
VCPKMT-202ENST00000395860 RIMBP3BA6NNM3 1639 aa31.27■■■□□ 2.6
VCPKMT-202ENST00000395860 RIMBP3Q9UFD9 1639 aa31.27■■■□□ 2.6
VCPKMT-202ENST00000395860 NCOA2Q15596 1464 aa31.26■■■□□ 2.59
VCPKMT-202ENST00000395860 ZCCHC11Q5TAX3 1644 aaKnown RBP31.25■■■□□ 2.59
VCPKMT-202ENST00000395860 TROQ12816 1431 aaPredicted RBP31.24■■■□□ 2.59
VCPKMT-202ENST00000395860 PHLDB1Q86UU1 1377 aa31.23■■■□□ 2.59
VCPKMT-202ENST00000395860 KDM5BQ9UGL1 1544 aa31.23■■■□□ 2.59
VCPKMT-202ENST00000395860 PLEKHD1A6NEE1 506 aa31.22■■■□□ 2.59
VCPKMT-202ENST00000395860 RRBP1Q9P2E9 1410 aaKnown RBP31.18■■■□□ 2.58
VCPKMT-202ENST00000395860 KIF14Q15058 1648 aa31.14■■■□□ 2.58
VCPKMT-202ENST00000395860 CCNB3Q8WWL7 1395 aa31.11■■■□□ 2.57
VCPKMT-202ENST00000395860 MYOM3Q5VTT5 1437 aa31.11■■■□□ 2.57
VCPKMT-202ENST00000395860 FGD6Q6ZV73 1430 aa31.06■■■□□ 2.56
VCPKMT-202ENST00000395860 CYB5RLQ6IPT4 315 aa31.05■■■□□ 2.56
VCPKMT-202ENST00000395860 NPM1P06748 294 aaKnown RBP eCLIP31.03■■■□□ 2.56
VCPKMT-202ENST00000395860 ITSN2Q9NZM3 1697 aa31.03■■■□□ 2.56
VCPKMT-202ENST00000395860 ABCC10Q5T3U5 1492 aa30.99■■■□□ 2.55
VCPKMT-202ENST00000395860 PTPN23Q9H3S7 1636 aa30.99■■■□□ 2.55
VCPKMT-202ENST00000395860 FAM50AQ14320 339 aaKnown RBP30.97■■■□□ 2.55
VCPKMT-202ENST00000395860 CDC42BPAQ5VT25 1732 aa30.97■■■□□ 2.55
VCPKMT-202ENST00000395860 MIA2Q96PC5 1412 aa30.97■■■□□ 2.55
VCPKMT-202ENST00000395860 WDR7Q9Y4E6 1490 aa30.95■■■□□ 2.55
VCPKMT-202ENST00000395860 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.94■■■□□ 2.54
VCPKMT-202ENST00000395860 GPATCH8Q9UKJ3 1502 aaKnown RBP30.93■■■□□ 2.54
VCPKMT-202ENST00000395860 KCNH8Q96L42 1107 aa30.93■■■□□ 2.54
VCPKMT-202ENST00000395860 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.92■■■□□ 2.54
VCPKMT-202ENST00000395860 ASXL2Q76L83 1435 aa30.92■■■□□ 2.54
VCPKMT-202ENST00000395860 TTC37Q6PGP7 1564 aa30.91■■■□□ 2.54
VCPKMT-202ENST00000395860 TCOF1Q13428 1488 aaKnown RBP30.89■■■□□ 2.54
VCPKMT-202ENST00000395860 MYO5CQ9NQX4 1742 aa30.87■■■□□ 2.53
VCPKMT-202ENST00000395860 PREX2Q70Z35 1606 aa30.86■■■□□ 2.53
VCPKMT-202ENST00000395860 ITGAEP38570 1179 aa30.85■■■□□ 2.53
VCPKMT-202ENST00000395860 CFDP1Q9UEE9 299 aaPredicted RBP30.85■■■□□ 2.53
VCPKMT-202ENST00000395860 CDC42BPBQ9Y5S2 1711 aa30.84■■■□□ 2.53
VCPKMT-202ENST00000395860 MAPKBP1O60336 1514 aa30.8■■■□□ 2.52
VCPKMT-202ENST00000395860 CAMSAP2Q08AD1 1489 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms