RNA–Protein interactions for RNA: ENST00000395751.8

SREBF1-203, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 4,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-203ENST00000395751 ZCCHC6Q5VYS8 1495 aaKnown RBP22.49■■□□□ 1.19
SREBF1-203ENST00000395751 FANCIQ9NVI1 1328 aa22.47■■□□□ 1.19
SREBF1-203ENST00000395751 L1TD1Q5T7N2 865 aaKnown RBP22.44■■□□□ 1.18
SREBF1-203ENST00000395751 IPO9Q96P70 1041 aaKnown RBP22.43■■□□□ 1.18
SREBF1-203ENST00000395751 CLIP1P30622 1438 aa22.43■■□□□ 1.18
SREBF1-203ENST00000395751 RSPH6AQ9H0K4 717 aa22.39■■□□□ 1.17
SREBF1-203ENST00000395751 PNNQ9H307 717 aaKnown RBP22.37■■□□□ 1.17
SREBF1-203ENST00000395751 GOLGA6L22H0YM25 854 aa22.36■■□□□ 1.17
SREBF1-203ENST00000395751 USP35Q9P2H5 1018 aa22.36■■□□□ 1.17
SREBF1-203ENST00000395751 P3H3Q8IVL6 736 aa22.34■■□□□ 1.17
SREBF1-203ENST00000395751 TNIKQ9UKE5 1360 aa22.33■■□□□ 1.16
SREBF1-203ENST00000395751 NCLP19338 710 aaKnown RBP22.32■■□□□ 1.16
SREBF1-203ENST00000395751 CDK11BP21127 795 aaKnown RBP22.29■■□□□ 1.16
SREBF1-203ENST00000395751 VSIG10Q8N0Z9 540 aa22.29■■□□□ 1.16
SREBF1-203ENST00000395751 ANO8Q9HCE9 1232 aaPredicted RBP22.28■■□□□ 1.16
SREBF1-203ENST00000395751 EEA1Q15075 1411 aa22.27■■□□□ 1.16
SREBF1-203ENST00000395751 WDR43Q15061 677 aaKnown RBP eCLIP22.25■■□□□ 1.154e-6■■□□□ 14
SREBF1-203ENST00000395751 DNTTIP2Q5QJE6 756 aaKnown RBP22.25■■□□□ 1.15
SREBF1-203ENST00000395751 HSP90AA2PQ14568 343 aaPredicted RBP22.25■■□□□ 1.15
SREBF1-203ENST00000395751 TIMELESSQ9UNS1 1208 aa22.23■■□□□ 1.15
SREBF1-203ENST00000395751 GOLGA3Q08378 1498 aa22.23■■□□□ 1.15
SREBF1-203ENST00000395751 TCERG1O14776 1098 aaKnown RBP22.22■■□□□ 1.15
SREBF1-203ENST00000395751 PTMAP06454 111 aaKnown RBP22.22■■□□□ 1.15
SREBF1-203ENST00000395751 SIN3AQ96ST3 1273 aa22.21■■□□□ 1.15
SREBF1-203ENST00000395751 RGS3P49796 1198 aa22.19■■□□□ 1.14
SREBF1-203ENST00000395751 ARID4BQ4LE39 1312 aaPredicted RBP22.19■■□□□ 1.14
SREBF1-203ENST00000395751 SENP3-EIF4A1A0A087X0R7 540 aa22.19■■□□□ 1.14
SREBF1-203ENST00000395751 MSNP26038 577 aaKnown RBP22.14■■□□□ 1.14
SREBF1-203ENST00000395751 GSE1Q14687 1217 aa22.14■■□□□ 1.13
SREBF1-203ENST00000395751 CHIC2Q9UKJ5 165 aa22.09■■□□□ 1.13
SREBF1-203ENST00000395751 KCNH8Q96L42 1107 aa22.07■■□□□ 1.12
SREBF1-203ENST00000395751 PKNOX2Q96KN3 472 aa22.06■■□□□ 1.12
SREBF1-203ENST00000395751 RSF1Q96T23 1441 aaPredicted RBP22.04■■□□□ 1.12
SREBF1-203ENST00000395751 GOLGA6L3A6NEY3 463 aa22.02■■□□□ 1.12
SREBF1-203ENST00000395751 CCNB3Q8WWL7 1395 aa21.95■■□□□ 1.1
SREBF1-203ENST00000395751 GZF1Q9H116 711 aaPredicted RBP21.95■■□□□ 1.1
SREBF1-203ENST00000395751 SLKQ9H2G2 1235 aaPredicted RBP21.93■■□□□ 1.1
SREBF1-203ENST00000395751 ZNF777Q9ULD5 760 aaPredicted RBP21.93■■□□□ 1.1
SREBF1-203ENST00000395751 KDM2AQ9Y2K7 1162 aa21.93■■□□□ 1.1
SREBF1-203ENST00000395751 CEP164Q9UPV0 1460 aa21.92■■□□□ 1.1
SREBF1-203ENST00000395751 HSP90AB1P08238 724 aaKnown RBP21.92■■□□□ 1.1
SREBF1-203ENST00000395751 IL27Q8NEV9 243 aa21.92■■□□□ 1.1
SREBF1-203ENST00000395751 ARID3CA6NKF2 412 aa21.92■■□□□ 1.1
SREBF1-203ENST00000395751 NUDCQ9Y266 331 aa21.92■■□□□ 1.1
SREBF1-203ENST00000395751 MTUS2Q5JR59 1369 aa21.92■■□□□ 1.1
SREBF1-203ENST00000395751 HSCBQ8IWL3 235 aa21.92■■□□□ 1.1
SREBF1-203ENST00000395751 MYH16Q9H6N6 1097 aa21.92■■□□□ 1.1
SREBF1-203ENST00000395751 CHAF1AQ13111 956 aaPredicted RBP21.9■■□□□ 1.1
SREBF1-203ENST00000395751 AMER1Q5JTC6 1135 aaPredicted RBP21.89■■□□□ 1.1
SREBF1-203ENST00000395751 RRP7BPQ9NSQ0 103 aa21.89■■□□□ 1.1
SREBF1-203ENST00000395751 RCAN3Q9UKA8 241 aa21.89■■□□□ 1.09
SREBF1-203ENST00000395751 PDE4AP27815 886 aa21.88■■□□□ 1.09
SREBF1-203ENST00000395751 ARID3AQ99856 593 aa21.87■■□□□ 1.09
SREBF1-203ENST00000395751 SPRYD3Q8NCJ5 442 aa21.85■■□□□ 1.09
SREBF1-203ENST00000395751 PTMSP20962 102 aa21.84■■□□□ 1.09
SREBF1-203ENST00000395751 PABPN1Q86U42 306 aaKnown RBP eCLIP21.83■■□□□ 1.09
SREBF1-203ENST00000395751 GBP4Q96PP9 640 aa21.83■■□□□ 1.09
SREBF1-203ENST00000395751 HSPA5P11021 654 aaKnown RBP21.83■■□□□ 1.09
SREBF1-203ENST00000395751 SCRIBQ14160 1630 aa21.82■■□□□ 1.08
SREBF1-203ENST00000395751 PPP1R15AO75807 674 aaPredicted RBP21.82■■□□□ 1.08
SREBF1-203ENST00000395751 PLCB2Q00722 1185 aa21.8■■□□□ 1.08
SREBF1-203ENST00000395751 VPS8Q8N3P4 1428 aa21.8■■□□□ 1.08
SREBF1-203ENST00000395751 SETD5Q9C0A6 1442 aa21.79■■□□□ 1.08
SREBF1-203ENST00000395751 SLC24A1O60721 1099 aa21.78■■□□□ 1.08
SREBF1-203ENST00000395751 FTSJ3Q8IY81 847 aaKnown RBP21.77■■□□□ 1.08
SREBF1-203ENST00000395751 MS4A1P11836 297 aa21.75■■□□□ 1.07
SREBF1-203ENST00000395751 CARD11Q9BXL7 1154 aa21.75■■□□□ 1.07
SREBF1-203ENST00000395751 WRNQ14191 1432 aaPredicted RBP eCLIP21.75■■□□□ 1.07
SREBF1-203ENST00000395751 FRAT1Q92837 279 aaPredicted RBP21.74■■□□□ 1.07
SREBF1-203ENST00000395751 BRPF3Q9ULD4 1205 aa21.74■■□□□ 1.07
SREBF1-203ENST00000395751 SLC4A3P48751 1232 aa21.74■■□□□ 1.07
SREBF1-203ENST00000395751 DHX57Q6P158 1386 aaKnown RBP21.74■■□□□ 1.07
SREBF1-203ENST00000395751 KIAA2012Q0VF49 1180 aa21.74■■□□□ 1.07
SREBF1-203ENST00000395751 PODXL2Q9NZ53 605 aa21.73■■□□□ 1.07
SREBF1-203ENST00000395751 UBE2Q2Q8WVN8 375 aa21.71■■□□□ 1.07
SREBF1-203ENST00000395751 KNSTRNQ9Y448 316 aa21.71■■□□□ 1.07
SREBF1-203ENST00000395751 RAB3GAP2Q9H2M9 1393 aa21.71■■□□□ 1.07
SREBF1-203ENST00000395751 RB1CC1Q8TDY2 1594 aa21.71■■□□□ 1.07
SREBF1-203ENST00000395751 ZBED9Q6R2W3 1325 aa21.71■■□□□ 1.07
SREBF1-203ENST00000395751 PAK3O75914 559 aaPredicted RBP21.7■■□□□ 1.06
SREBF1-203ENST00000395751 CASC1Q6TDU7 716 aa21.7■■□□□ 1.06
SREBF1-203ENST00000395751 NFKBIBQ15653 356 aa21.7■■□□□ 1.06
SREBF1-203ENST00000395751 MSH5O43196 834 aa21.69■■□□□ 1.06
SREBF1-203ENST00000395751 FAM43AQ8N2R8 423 aa21.68■■□□□ 1.06
SREBF1-203ENST00000395751 TNNT3P45378 269 aaPredicted RBP21.66■■□□□ 1.06
SREBF1-203ENST00000395751 FAM161AQ3B820 660 aa21.65■■□□□ 1.06
SREBF1-203ENST00000395751 PDE3BQ13370 1112 aa21.64■■□□□ 1.06
SREBF1-203ENST00000395751 SOGA1O94964 1423 aa21.64■■□□□ 1.05
SREBF1-203ENST00000395751 ABCC9O60706 1549 aa21.64■■□□□ 1.05
SREBF1-203ENST00000395751 A0A0U1RQG5 324 aaPredicted RBP21.63■■□□□ 1.05
SREBF1-203ENST00000395751 TPRNQ4KMQ1 711 aa21.63■■□□□ 1.05
SREBF1-203ENST00000395751 DDX11L8A8MPP1 907 aa21.62■■□□□ 1.05
SREBF1-203ENST00000395751 CDCA8Q53HL2 280 aa21.6■■□□□ 1.05
SREBF1-203ENST00000395751 KANK4Q5T7N3 995 aaPredicted RBP21.6■■□□□ 1.05
SREBF1-203ENST00000395751 ZRSR1Q15695 479 aaKnown RBP21.59■■□□□ 1.05
SREBF1-203ENST00000395751 ZBTB7CA1YPR0 619 aa21.59■■□□□ 1.05
SREBF1-203ENST00000395751 TSPY4P0CV99 314 aa21.59■■□□□ 1.05
SREBF1-203ENST00000395751 TSPY10P0CW01 314 aa21.59■■□□□ 1.05
SREBF1-203ENST00000395751 CC2D1BQ5T0F9 858 aaKnown RBP21.59■■□□□ 1.05
SREBF1-203ENST00000395751 NEUROD2Q15784 382 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms