RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 CHD1O14646 1710 aa24.28■■□□□ 1.48
PTPN20-206ENST00000395722 CEP170Q5SW79 1584 aa24.26■■□□□ 1.47
PTPN20-206ENST00000395722 CLIP1P30622 1438 aa24.25■■□□□ 1.47
PTPN20-206ENST00000395722 FBLN2P98095 1184 aa24.23■■□□□ 1.47
PTPN20-206ENST00000395722 KIAA0586Q9BVV6 1533 aa24.23■■□□□ 1.47
PTPN20-206ENST00000395722 IQGAP2Q13576 1575 aa24.21■■□□□ 1.47
PTPN20-206ENST00000395722 ARHGAP35Q9NRY4 1499 aa24.16■■□□□ 1.46
PTPN20-206ENST00000395722 EFCAB5A4FU69 1503 aa24.14■■□□□ 1.45
PTPN20-206ENST00000395722 UGGT2Q9NYU1 1516 aa24.13■■□□□ 1.45
PTPN20-206ENST00000395722 SAMD9Q5K651 1589 aa24.12■■□□□ 1.45
PTPN20-206ENST00000395722 ARAP1Q96P48 1450 aa24.1■■□□□ 1.45
PTPN20-206ENST00000395722 RANGAP1P46060 587 aaPredicted RBP24.09■■□□□ 1.45
PTPN20-206ENST00000395722 CLASP1Q7Z460 1538 aa24.07■■□□□ 1.44
PTPN20-206ENST00000395722 SHROOM2Q13796 1616 aa24.02■■□□□ 1.44
PTPN20-206ENST00000395722 DISP1Q96F81 1524 aa24.01■■□□□ 1.43
PTPN20-206ENST00000395722 VPS8Q8N3P4 1428 aa24■■□□□ 1.43
PTPN20-206ENST00000395722 JPH4Q96JJ6 628 aa24■■□□□ 1.43
PTPN20-206ENST00000395722 KIAA0556O60303 1618 aa23.98■■□□□ 1.43
PTPN20-206ENST00000395722 FHOD3Q2V2M9 1422 aa23.97■■□□□ 1.43
PTPN20-206ENST00000395722 P3H3Q8IVL6 736 aa23.92■■□□□ 1.42
PTPN20-206ENST00000395722 OSCARQ8IYS5 282 aa23.92■■□□□ 1.42
PTPN20-206ENST00000395722 CARMIL2Q6F5E8 1435 aa23.9■■□□□ 1.42
PTPN20-206ENST00000395722 PRG4Q92954 1404 aaPredicted RBP23.89■■□□□ 1.41
PTPN20-206ENST00000395722 FMN1Q68DA7 1419 aa23.88■■□□□ 1.41
PTPN20-206ENST00000395722 PCF11O94913 1555 aaKnown RBP23.82■■□□□ 1.4
PTPN20-206ENST00000395722 CASKIN1Q8WXD9 1431 aa23.81■■□□□ 1.4
PTPN20-206ENST00000395722 ERCC6L2Q5T890 1561 aa23.8■■□□□ 1.4
PTPN20-206ENST00000395722 FYCO1Q9BQS8 1478 aa23.79■■□□□ 1.4
PTPN20-206ENST00000395722 MAP3K1Q13233 1512 aa23.72■■□□□ 1.39
PTPN20-206ENST00000395722 PTPRGP23470 1445 aa23.7■■□□□ 1.38
PTPN20-206ENST00000395722 RAPGEF6Q8TEU7 1601 aa23.69■■□□□ 1.38
PTPN20-206ENST00000395722 HECW1Q76N89 1606 aa23.69■■□□□ 1.38
PTPN20-206ENST00000395722 ABCA8O94911 1581 aa23.68■■□□□ 1.38
PTPN20-206ENST00000395722 CFAP43Q8NDM7 1665 aa23.66■■□□□ 1.38
PTPN20-206ENST00000395722 PLB1Q6P1J6 1458 aa23.66■■□□□ 1.38
PTPN20-206ENST00000395722 TIAM1Q13009 1591 aa23.65■■□□□ 1.38
PTPN20-206ENST00000395722 LRRIQ1Q96JM4 1722 aa23.65■■□□□ 1.38
PTPN20-206ENST00000395722 APLP2Q06481 763 aa23.63■■□□□ 1.37
PTPN20-206ENST00000395722 NUP153P49790 1475 aaKnown RBP23.63■■□□□ 1.37
PTPN20-206ENST00000395722 TTBK1Q5TCY1 1321 aaPredicted RBP23.61■■□□□ 1.37
PTPN20-206ENST00000395722 CCDC18Q5T9S5 1454 aa23.61■■□□□ 1.37
PTPN20-206ENST00000395722 EPRSP07814 1512 aaKnown RBP23.6■■□□□ 1.37
PTPN20-206ENST00000395722 UACAQ9BZF9 1416 aa23.58■■□□□ 1.37
PTPN20-206ENST00000395722 ARHGEF11O15085 1522 aa23.57■■□□□ 1.36
PTPN20-206ENST00000395722 ATP1B4Q9UN42 357 aaPredicted RBP23.57■■□□□ 1.36
PTPN20-206ENST00000395722 UHRF1BP1LA0JNW5 1464 aa23.55■■□□□ 1.36
PTPN20-206ENST00000395722 ABCC2Q92887 1545 aa23.55■■□□□ 1.36
PTPN20-206ENST00000395722 LRRC9Q6ZRR7 1453 aa23.54■■□□□ 1.36
PTPN20-206ENST00000395722 KANK4Q5T7N3 995 aaPredicted RBP23.53■■□□□ 1.36
PTPN20-206ENST00000395722 CDK13Q14004 1512 aaKnown RBP23.53■■□□□ 1.36
PTPN20-206ENST00000395722 PPARGC1BQ86YN6 1023 aaKnown RBP23.52■■□□□ 1.36
PTPN20-206ENST00000395722 RIMBP3CA6NJZ7 1639 aa23.48■■□□□ 1.35
PTPN20-206ENST00000395722 RIMBP3BA6NNM3 1639 aa23.48■■□□□ 1.35
PTPN20-206ENST00000395722 RIMBP3Q9UFD9 1639 aa23.48■■□□□ 1.35
PTPN20-206ENST00000395722 ATP10BO94823 1461 aa23.48■■□□□ 1.35
PTPN20-206ENST00000395722 MAGI3Q5TCQ9 1506 aa23.46■■□□□ 1.35
PTPN20-206ENST00000395722 ADCY10Q96PN6 1610 aa23.45■■□□□ 1.34
PTPN20-206ENST00000395722 EHBP1L1Q8N3D4 1523 aa23.44■■□□□ 1.34
PTPN20-206ENST00000395722 KDM5BQ9UGL1 1544 aa23.43■■□□□ 1.34
PTPN20-206ENST00000395722 ARID3CA6NKF2 412 aa23.41■■□□□ 1.34
PTPN20-206ENST00000395722 MTUS2Q5JR59 1369 aa23.41■■□□□ 1.34
PTPN20-206ENST00000395722 ZCCHC11Q5TAX3 1644 aaKnown RBP23.37■■□□□ 1.33
PTPN20-206ENST00000395722 CDK11AQ9UQ88 783 aaPredicted RBP23.37■■□□□ 1.33
PTPN20-206ENST00000395722 TROQ12816 1431 aaPredicted RBP23.36■■□□□ 1.33
PTPN20-206ENST00000395722 SUPT6HQ7KZ85 1726 aaKnown RBP23.34■■□□□ 1.33
PTPN20-206ENST00000395722 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.33■■□□□ 1.33
PTPN20-206ENST00000395722 HNRNPUL2Q1KMD3 747 aaKnown RBP23.33■■□□□ 1.33
PTPN20-206ENST00000395722 TRIM26Q12899 539 aaPredicted RBP23.32■■□□□ 1.32
PTPN20-206ENST00000395722 NCOA2Q15596 1464 aa23.31■■□□□ 1.32
PTPN20-206ENST00000395722 PLEKHD1A6NEE1 506 aa23.29■■□□□ 1.32
PTPN20-206ENST00000395722 PHLDB1Q86UU1 1377 aa23.28■■□□□ 1.32
PTPN20-206ENST00000395722 CYB5RLQ6IPT4 315 aa23.25■■□□□ 1.31
PTPN20-206ENST00000395722 KIF14Q15058 1648 aa23.24■■□□□ 1.31
PTPN20-206ENST00000395722 RRBP1Q9P2E9 1410 aaKnown RBP23.24■■□□□ 1.31
PTPN20-206ENST00000395722 ABCC10Q5T3U5 1492 aa23.21■■□□□ 1.31
PTPN20-206ENST00000395722 MYOM3Q5VTT5 1437 aa23.2■■□□□ 1.3
PTPN20-206ENST00000395722 WDR7Q9Y4E6 1490 aa23.19■■□□□ 1.3
PTPN20-206ENST00000395722 NPM1P06748 294 aaKnown RBP eCLIP23.17■■□□□ 1.3
PTPN20-206ENST00000395722 ASXL2Q76L83 1435 aa23.17■■□□□ 1.3
PTPN20-206ENST00000395722 FGD6Q6ZV73 1430 aa23.16■■□□□ 1.3
PTPN20-206ENST00000395722 CCNB3Q8WWL7 1395 aa23.15■■□□□ 1.3
PTPN20-206ENST00000395722 MAPKBP1O60336 1514 aa23.14■■□□□ 1.29
PTPN20-206ENST00000395722 PCGF6Q9BYE7 350 aa23.12■■□□□ 1.29
PTPN20-206ENST00000395722 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.12■■□□□ 1.29
PTPN20-206ENST00000395722 GPATCH8Q9UKJ3 1502 aaKnown RBP23.12■■□□□ 1.29
PTPN20-206ENST00000395722 MIA2Q96PC5 1412 aa23.12■■□□□ 1.29
PTPN20-206ENST00000395722 ITSN2Q9NZM3 1697 aa23.12■■□□□ 1.29
PTPN20-206ENST00000395722 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.11■■□□□ 1.29
PTPN20-206ENST00000395722 TTC37Q6PGP7 1564 aa23.1■■□□□ 1.29
PTPN20-206ENST00000395722 CDC42BPAQ5VT25 1732 aa23.09■■□□□ 1.29
PTPN20-206ENST00000395722 DNAJC5Q9H3Z4 198 aa23.09■■□□□ 1.29
PTPN20-206ENST00000395722 TCOF1Q13428 1488 aaKnown RBP23.09■■□□□ 1.29
PTPN20-206ENST00000395722 PTPN23Q9H3S7 1636 aa23.07■■□□□ 1.28
PTPN20-206ENST00000395722 KCNH8Q96L42 1107 aa23.05■■□□□ 1.28
PTPN20-206ENST00000395722 PREX2Q70Z35 1606 aa23.05■■□□□ 1.28
PTPN20-206ENST00000395722 ABCA9Q8IUA7 1624 aa23.05■■□□□ 1.28
PTPN20-206ENST00000395722 MYO5CQ9NQX4 1742 aa23.02■■□□□ 1.28
PTPN20-206ENST00000395722 CDC42BPBQ9Y5S2 1711 aa23.01■■□□□ 1.27
PTPN20-206ENST00000395722 ARAP3Q8WWN8 1544 aa23■■□□□ 1.27
PTPN20-206ENST00000395722 PLCH2O75038 1416 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms