RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 JPH4Q96JJ6 628 aa13.98□□□□□ -0.17
HERC4-203ENST00000395185 GRIN2AQ12879 1464 aa13.98□□□□□ -0.17
HERC4-203ENST00000395185 CARMIL1Q5VZK9 1371 aa13.97□□□□□ -0.17
HERC4-203ENST00000395185 RUSC2Q8N2Y8 1516 aa13.97□□□□□ -0.17
HERC4-203ENST00000395185 NCBP3Q53F19 620 aaKnown RBP13.96□□□□□ -0.17
HERC4-203ENST00000395185 ARHGEF11O15085 1522 aa13.95□□□□□ -0.18
HERC4-203ENST00000395185 CSRNP3Q8WYN3 585 aa13.95□□□□□ -0.18
HERC4-203ENST00000395185 CHD1O14646 1710 aa13.94□□□□□ -0.18
HERC4-203ENST00000395185 NUP160Q12769 1436 aa13.93□□□□□ -0.18
HERC4-203ENST00000395185 PBRM1Q86U86 1689 aa13.92□□□□□ -0.18
HERC4-203ENST00000395185 ADAMTS12P58397 1594 aa13.91□□□□□ -0.18
HERC4-203ENST00000395185 RIMBP3CA6NJZ7 1639 aa13.9□□□□□ -0.19
HERC4-203ENST00000395185 RIMBP3BA6NNM3 1639 aa13.9□□□□□ -0.19
HERC4-203ENST00000395185 RIMBP3Q9UFD9 1639 aa13.9□□□□□ -0.19
HERC4-203ENST00000395185 FAM9AQ8IZU1 332 aaPredicted RBP13.89□□□□□ -0.19
HERC4-203ENST00000395185 CLASP1Q7Z460 1538 aa13.89□□□□□ -0.19
HERC4-203ENST00000395185 TRHP20396 242 aaPredicted RBP13.85□□□□□ -0.19
HERC4-203ENST00000395185 PRXQ9BXM0 1461 aa13.85□□□□□ -0.19
HERC4-203ENST00000395185 PRG4Q92954 1404 aaPredicted RBP13.84□□□□□ -0.19
HERC4-203ENST00000395185 ARAP1Q96P48 1450 aa13.84□□□□□ -0.19
HERC4-203ENST00000395185 KIAA0586Q9BVV6 1533 aa13.84□□□□□ -0.19
HERC4-203ENST00000395185 NPM1P06748 294 aaKnown RBP eCLIP13.83□□□□□ -0.2
HERC4-203ENST00000395185 RAPGEF2Q9Y4G8 1499 aa13.82□□□□□ -0.2
HERC4-203ENST00000395185 LOC105371045A0A1W2PR82 267 aa13.82□□□□□ -0.2
HERC4-203ENST00000395185 CEP170Q5SW79 1584 aa13.82□□□□□ -0.2
HERC4-203ENST00000395185 CUL7Q14999 1698 aa13.8□□□□□ -0.2
HERC4-203ENST00000395185 CARMIL2Q6F5E8 1435 aa13.78□□□□□ -0.2
HERC4-203ENST00000395185 TTBK1Q5TCY1 1321 aaPredicted RBP13.76□□□□□ -0.21
HERC4-203ENST00000395185 KCNA4P22459 653 aa13.75□□□□□ -0.21
HERC4-203ENST00000395185 RNF216Q9NWF9 866 aaPredicted RBP13.75□□□□□ -0.21
HERC4-203ENST00000395185 KIF21BO75037 1637 aa13.74□□□□□ -0.21
HERC4-203ENST00000395185 PTPRGP23470 1445 aa13.73□□□□□ -0.21
HERC4-203ENST00000395185 HOXD11P31277 338 aaPredicted RBP13.72□□□□□ -0.21
HERC4-203ENST00000395185 TNIKQ9UKE5 1360 aa13.71□□□□□ -0.21
HERC4-203ENST00000395185 GOLGA3Q08378 1498 aa13.71□□□□□ -0.21
HERC4-203ENST00000395185 SHROOM2Q13796 1616 aa13.68□□□□□ -0.22
HERC4-203ENST00000395185 ERCC6L2Q5T890 1561 aa13.68□□□□□ -0.22
HERC4-203ENST00000395185 NPM3O75607 178 aaKnown RBP13.67□□□□□ -0.22
HERC4-203ENST00000395185 UBTFP17480 764 aaKnown RBP13.67□□□□□ -0.22
HERC4-203ENST00000395185 IQGAP2Q13576 1575 aa13.64□□□□□ -0.23
HERC4-203ENST00000395185 RANGAP1P46060 587 aaPredicted RBP13.63□□□□□ -0.23
HERC4-203ENST00000395185 P3H3Q8IVL6 736 aa13.62□□□□□ -0.23
HERC4-203ENST00000395185 EHMT2Q96KQ7 1210 aa13.62□□□□□ -0.23
HERC4-203ENST00000395185 UGGT2Q9NYU1 1516 aa13.6□□□□□ -0.23
HERC4-203ENST00000395185 FAM69CQ0P6D2 419 aa13.6□□□□□ -0.23
HERC4-203ENST00000395185 UACAQ9BZF9 1416 aa13.58□□□□□ -0.24
HERC4-203ENST00000395185 DISP1Q96F81 1524 aa13.57□□□□□ -0.24
HERC4-203ENST00000395185 CEP162Q5TB80 1403 aa13.53□□□□□ -0.24
HERC4-203ENST00000395185 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.52□□□□□ -0.25
HERC4-203ENST00000395185 HNRNPUL2Q1KMD3 747 aaKnown RBP13.52□□□□□ -0.25
HERC4-203ENST00000395185 UHRF1BP1LA0JNW5 1464 aa13.52□□□□□ -0.25
HERC4-203ENST00000395185 ABCC2Q92887 1545 aa13.5□□□□□ -0.25
HERC4-203ENST00000395185 CLIP1P30622 1438 aa13.49□□□□□ -0.25
HERC4-203ENST00000395185 DCAF8L1A6NGE4 600 aa13.49□□□□□ -0.25
HERC4-203ENST00000395185 PLB1Q6P1J6 1458 aa13.48□□□□□ -0.25
HERC4-203ENST00000395185 KIAA0556O60303 1618 aa13.47□□□□□ -0.25
HERC4-203ENST00000395185 KCNH8Q96L42 1107 aa13.47□□□□□ -0.25
HERC4-203ENST00000395185 ABCC10Q5T3U5 1492 aa13.47□□□□□ -0.25
HERC4-203ENST00000395185 ARID3CA6NKF2 412 aa13.46□□□□□ -0.25
HERC4-203ENST00000395185 ATP1B4Q9UN42 357 aaPredicted RBP13.46□□□□□ -0.25
HERC4-203ENST00000395185 ARHGAP35Q9NRY4 1499 aa13.46□□□□□ -0.25
HERC4-203ENST00000395185 MAPKBP1O60336 1514 aa13.45□□□□□ -0.26
HERC4-203ENST00000395185 ADCY10Q96PN6 1610 aa13.45□□□□□ -0.26
HERC4-203ENST00000395185 ASXL2Q76L83 1435 aa13.45□□□□□ -0.26
HERC4-203ENST00000395185 PLEKHD1A6NEE1 506 aa13.43□□□□□ -0.26
HERC4-203ENST00000395185 KDM5BQ9UGL1 1544 aa13.43□□□□□ -0.26
HERC4-203ENST00000395185 CTTNBP2Q8WZ74 1663 aa13.42□□□□□ -0.26
HERC4-203ENST00000395185 CDK11AQ9UQ88 783 aaPredicted RBP13.4□□□□□ -0.26
HERC4-203ENST00000395185 FHOD3Q2V2M9 1422 aa13.39□□□□□ -0.27
HERC4-203ENST00000395185 EFCAB5A4FU69 1503 aa13.39□□□□□ -0.27
HERC4-203ENST00000395185 SAMD9Q5K651 1589 aa13.38□□□□□ -0.27
HERC4-203ENST00000395185 FMN1Q68DA7 1419 aa13.37□□□□□ -0.27
HERC4-203ENST00000395185 VPS8Q8N3P4 1428 aa13.36□□□□□ -0.27
HERC4-203ENST00000395185 ABCA8O94911 1581 aa13.36□□□□□ -0.27
HERC4-203ENST00000395185 ATP10BO94823 1461 aa13.36□□□□□ -0.27
HERC4-203ENST00000395185 WDR7Q9Y4E6 1490 aa13.35□□□□□ -0.27
HERC4-203ENST00000395185 EPRSP07814 1512 aaKnown RBP13.34□□□□□ -0.27
HERC4-203ENST00000395185 CD109Q6YHK3 1445 aa13.32□□□□□ -0.28
HERC4-203ENST00000395185 DIP2BQ9P265 1576 aa13.3□□□□□ -0.28
HERC4-203ENST00000395185 GLI2P10070 1586 aa13.29□□□□□ -0.28
HERC4-203ENST00000395185 TEX14Q8IWB6 1497 aa13.29□□□□□ -0.28
HERC4-203ENST00000395185 ZCCHC11Q5TAX3 1644 aaKnown RBP13.28□□□□□ -0.28
HERC4-203ENST00000395185 ILDR1Q86SU0 546 aaPredicted RBP13.28□□□□□ -0.28
HERC4-203ENST00000395185 CASKIN1Q8WXD9 1431 aa13.28□□□□□ -0.28
HERC4-203ENST00000395185 NUP153P49790 1475 aaKnown RBP13.28□□□□□ -0.28
HERC4-203ENST00000395185 RAPGEF6Q8TEU7 1601 aa13.26□□□□□ -0.29
HERC4-203ENST00000395185 PHLDB1Q86UU1 1377 aa13.25□□□□□ -0.29
HERC4-203ENST00000395185 MAP3K1Q13233 1512 aa13.23□□□□□ -0.29
HERC4-203ENST00000395185 FYCO1Q9BQS8 1478 aa13.22□□□□□ -0.29
HERC4-203ENST00000395185 KIF13AQ9H1H9 1805 aa13.21□□□□□ -0.29
HERC4-203ENST00000395185 MAGI3Q5TCQ9 1506 aa13.21□□□□□ -0.29
HERC4-203ENST00000395185 EFCAB2Q5VUJ9 269 aa13.2□□□□□ -0.3
HERC4-203ENST00000395185 KANK4Q5T7N3 995 aaPredicted RBP13.17□□□□□ -0.3
HERC4-203ENST00000395185 KDM6BO15054 1643 aa13.16□□□□□ -0.3
HERC4-203ENST00000395185 PCF11O94913 1555 aaKnown RBP13.15□□□□□ -0.3
HERC4-203ENST00000395185 RAPGEF3O95398 923 aa13.15□□□□□ -0.3
HERC4-203ENST00000395185 APLP2Q06481 763 aa13.15□□□□□ -0.3
HERC4-203ENST00000395185 CCDC18Q5T9S5 1454 aa13.15□□□□□ -0.3
HERC4-203ENST00000395185 TSPOAP1O95153 1857 aa13.14□□□□□ -0.31
HERC4-203ENST00000395185 TROQ12816 1431 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms