RNA–Protein interactions for RNA: ENST00000395098.5

VPS26A-203, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5 BASIC

Gene VPS26A, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-203ENST00000395098 CTTNBP2Q8WZ74 1663 aa20.84■□□□□ 0.93
VPS26A-203ENST00000395098 FBLN2P98095 1184 aa20.83■□□□□ 0.93
VPS26A-203ENST00000395098 ARHGAP35Q9NRY4 1499 aa20.81■□□□□ 0.92
VPS26A-203ENST00000395098 ARAP1Q96P48 1450 aa20.78■□□□□ 0.92
VPS26A-203ENST00000395098 CEP170Q5SW79 1584 aa20.74■□□□□ 0.91
VPS26A-203ENST00000395098 P3H3Q8IVL6 736 aa20.72■□□□□ 0.91
VPS26A-203ENST00000395098 VPS8Q8N3P4 1428 aa20.72■□□□□ 0.91
VPS26A-203ENST00000395098 IQGAP2Q13576 1575 aa20.72■□□□□ 0.91
VPS26A-203ENST00000395098 NUP160Q12769 1436 aa20.72■□□□□ 0.91
VPS26A-203ENST00000395098 KIAA0586Q9BVV6 1533 aa20.72■□□□□ 0.91
VPS26A-203ENST00000395098 CHD1O14646 1710 aa20.68■□□□□ 0.9
VPS26A-203ENST00000395098 EFCAB5A4FU69 1503 aa20.67■□□□□ 0.9
VPS26A-203ENST00000395098 FHOD3Q2V2M9 1422 aa20.67■□□□□ 0.9
VPS26A-203ENST00000395098 SAMD9Q5K651 1589 aa20.65■□□□□ 0.9
VPS26A-203ENST00000395098 PPARGC1BQ86YN6 1023 aaKnown RBP20.63■□□□□ 0.89
VPS26A-203ENST00000395098 UGGT2Q9NYU1 1516 aa20.62■□□□□ 0.89
VPS26A-203ENST00000395098 DISP1Q96F81 1524 aa20.57■□□□□ 0.88
VPS26A-203ENST00000395098 JPH4Q96JJ6 628 aa20.56■□□□□ 0.88
VPS26A-203ENST00000395098 KIAA0556O60303 1618 aa20.52■□□□□ 0.88
VPS26A-203ENST00000395098 FMN1Q68DA7 1419 aa20.5■□□□□ 0.87
VPS26A-203ENST00000395098 PCF11O94913 1555 aaKnown RBP20.5■□□□□ 0.87
VPS26A-203ENST00000395098 TTBK1Q5TCY1 1321 aaPredicted RBP20.5■□□□□ 0.87
VPS26A-203ENST00000395098 APLP2Q06481 763 aa20.47■□□□□ 0.87
VPS26A-203ENST00000395098 CLASP1Q7Z460 1538 aa20.46■□□□□ 0.87
VPS26A-203ENST00000395098 CASKIN1Q8WXD9 1431 aa20.46■□□□□ 0.87
VPS26A-203ENST00000395098 PRG4Q92954 1404 aaPredicted RBP20.45■□□□□ 0.86
VPS26A-203ENST00000395098 ATP1B4Q9UN42 357 aaPredicted RBP20.44■□□□□ 0.86
VPS26A-203ENST00000395098 CARMIL2Q6F5E8 1435 aa20.43■□□□□ 0.86
VPS26A-203ENST00000395098 FYCO1Q9BQS8 1478 aa20.43■□□□□ 0.86
VPS26A-203ENST00000395098 SHROOM2Q13796 1616 aa20.43■□□□□ 0.86
VPS26A-203ENST00000395098 KANK4Q5T7N3 995 aaPredicted RBP20.42■□□□□ 0.86
VPS26A-203ENST00000395098 TRIM26Q12899 539 aaPredicted RBP20.38■□□□□ 0.85
VPS26A-203ENST00000395098 PCGF6Q9BYE7 350 aa20.38■□□□□ 0.85
VPS26A-203ENST00000395098 ERCC6L2Q5T890 1561 aa20.37■□□□□ 0.85
VPS26A-203ENST00000395098 TIAM1Q13009 1591 aa20.37■□□□□ 0.85
VPS26A-203ENST00000395098 OSCARQ8IYS5 282 aa20.36■□□□□ 0.85
VPS26A-203ENST00000395098 MAP3K1Q13233 1512 aa20.35■□□□□ 0.85
VPS26A-203ENST00000395098 LRRIQ1Q96JM4 1722 aa20.33■□□□□ 0.85
VPS26A-203ENST00000395098 PLB1Q6P1J6 1458 aa20.32■□□□□ 0.84
VPS26A-203ENST00000395098 CFAP43Q8NDM7 1665 aa20.31■□□□□ 0.84
VPS26A-203ENST00000395098 ARID3CA6NKF2 412 aa20.3■□□□□ 0.84
VPS26A-203ENST00000395098 HECW1Q76N89 1606 aa20.3■□□□□ 0.84
VPS26A-203ENST00000395098 LRRC9Q6ZRR7 1453 aa20.29■□□□□ 0.84
VPS26A-203ENST00000395098 PTPRGP23470 1445 aa20.29■□□□□ 0.84
VPS26A-203ENST00000395098 RAPGEF6Q8TEU7 1601 aa20.28■□□□□ 0.84
VPS26A-203ENST00000395098 NUP153P49790 1475 aaKnown RBP20.28■□□□□ 0.84
VPS26A-203ENST00000395098 EPRSP07814 1512 aaKnown RBP20.27■□□□□ 0.84
VPS26A-203ENST00000395098 CDK13Q14004 1512 aaKnown RBP20.25■□□□□ 0.83
VPS26A-203ENST00000395098 ABCA8O94911 1581 aa20.24■□□□□ 0.83
VPS26A-203ENST00000395098 CCDC18Q5T9S5 1454 aa20.23■□□□□ 0.83
VPS26A-203ENST00000395098 MAGI3Q5TCQ9 1506 aa20.21■□□□□ 0.83
VPS26A-203ENST00000395098 MTUS2Q5JR59 1369 aa20.18■□□□□ 0.82
VPS26A-203ENST00000395098 UACAQ9BZF9 1416 aa20.17■□□□□ 0.82
VPS26A-203ENST00000395098 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.15■□□□□ 0.82
VPS26A-203ENST00000395098 HNRNPUL2Q1KMD3 747 aaKnown RBP20.15■□□□□ 0.82
VPS26A-203ENST00000395098 PHLDB1Q86UU1 1377 aa20.14■□□□□ 0.81
VPS26A-203ENST00000395098 ATP10BO94823 1461 aa20.13■□□□□ 0.81
VPS26A-203ENST00000395098 EHBP1L1Q8N3D4 1523 aa20.12■□□□□ 0.81
VPS26A-203ENST00000395098 ABCC2Q92887 1545 aa20.1■□□□□ 0.81
VPS26A-203ENST00000395098 NCOA2Q15596 1464 aa20.08■□□□□ 0.8
VPS26A-203ENST00000395098 RRBP1Q9P2E9 1410 aaKnown RBP20.07■□□□□ 0.8
VPS26A-203ENST00000395098 CDK11AQ9UQ88 783 aaPredicted RBP20.06■□□□□ 0.8
VPS26A-203ENST00000395098 SUPT6HQ7KZ85 1726 aaKnown RBP20.05■□□□□ 0.8
VPS26A-203ENST00000395098 UHRF1BP1LA0JNW5 1464 aa20.05■□□□□ 0.8
VPS26A-203ENST00000395098 ARHGEF11O15085 1522 aa20.04■□□□□ 0.8
VPS26A-203ENST00000395098 TROQ12816 1431 aaPredicted RBP20.03■□□□□ 0.8
VPS26A-203ENST00000395098 CCNB3Q8WWL7 1395 aa20.03■□□□□ 0.8
VPS26A-203ENST00000395098 ADCY10Q96PN6 1610 aa20.01■□□□□ 0.79
VPS26A-203ENST00000395098 PLEKHD1A6NEE1 506 aa20■□□□□ 0.79
VPS26A-203ENST00000395098 KDM5BQ9UGL1 1544 aa19.99■□□□□ 0.79
VPS26A-203ENST00000395098 MYOM3Q5VTT5 1437 aa19.98■□□□□ 0.79
VPS26A-203ENST00000395098 KIF14Q15058 1648 aa19.97■□□□□ 0.79
VPS26A-203ENST00000395098 FGD6Q6ZV73 1430 aa19.97■□□□□ 0.79
VPS26A-203ENST00000395098 ZCCHC11Q5TAX3 1644 aaKnown RBP19.96■□□□□ 0.79
VPS26A-203ENST00000395098 FAM50AQ14320 339 aaKnown RBP19.93■□□□□ 0.78
VPS26A-203ENST00000395098 RIMBP3CA6NJZ7 1639 aa19.93■□□□□ 0.78
VPS26A-203ENST00000395098 RIMBP3BA6NNM3 1639 aa19.93■□□□□ 0.78
VPS26A-203ENST00000395098 RIMBP3Q9UFD9 1639 aa19.93■□□□□ 0.78
VPS26A-203ENST00000395098 ITGAEP38570 1179 aa19.9■□□□□ 0.78
VPS26A-203ENST00000395098 ABCC10Q5T3U5 1492 aa19.89■□□□□ 0.78
VPS26A-203ENST00000395098 CYB5RLQ6IPT4 315 aa19.88■□□□□ 0.77
VPS26A-203ENST00000395098 GPATCH8Q9UKJ3 1502 aaKnown RBP19.87■□□□□ 0.77
VPS26A-203ENST00000395098 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.86■□□□□ 0.779e-8■□□□□ 9.9
VPS26A-203ENST00000395098 MIA2Q96PC5 1412 aa19.86■□□□□ 0.77
VPS26A-203ENST00000395098 PTPN23Q9H3S7 1636 aa19.86■□□□□ 0.77
VPS26A-203ENST00000395098 KCNH8Q96L42 1107 aa19.86■□□□□ 0.77
VPS26A-203ENST00000395098 TCOF1Q13428 1488 aaKnown RBP19.83■□□□□ 0.77
VPS26A-203ENST00000395098 ZNF644Q9H582 1327 aaPredicted RBP19.83■□□□□ 0.76
VPS26A-203ENST00000395098 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.81■□□□□ 0.76
VPS26A-203ENST00000395098 CFDP1Q9UEE9 299 aaPredicted RBP19.81■□□□□ 0.76
VPS26A-203ENST00000395098 WDR7Q9Y4E6 1490 aa19.8■□□□□ 0.76
VPS26A-203ENST00000395098 ASXL2Q76L83 1435 aa19.8■□□□□ 0.76
VPS26A-203ENST00000395098 TTC37Q6PGP7 1564 aa19.8■□□□□ 0.76
VPS26A-203ENST00000395098 NPM1P06748 294 aaKnown RBP eCLIP19.8■□□□□ 0.76
VPS26A-203ENST00000395098 CDC42BPAQ5VT25 1732 aa19.79■□□□□ 0.76
VPS26A-203ENST00000395098 PTPRKQ15262 1439 aa19.79■□□□□ 0.76
VPS26A-203ENST00000395098 ITSN2Q9NZM3 1697 aa19.78■□□□□ 0.76
VPS26A-203ENST00000395098 ZNF777Q9ULD5 760 aaPredicted RBP19.76■□□□□ 0.75
VPS26A-203ENST00000395098 CAMSAP2Q08AD1 1489 aa19.74■□□□□ 0.75
VPS26A-203ENST00000395098 PREX2Q70Z35 1606 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms