RNA–Protein interactions for RNA: ENST00000394800.6

MATR3-230, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-230ENST00000394800 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.57□□□□□ -1.04
MATR3-230ENST00000394800 IGF1RP08069 1367 aa8.56□□□□□ -1.04
MATR3-230ENST00000394800 ARID3AQ99856 593 aa8.56□□□□□ -1.04
MATR3-230ENST00000394800 ERICH3Q5RHP9 1530 aa8.55□□□□□ -1.04
MATR3-230ENST00000394800 VPS8Q8N3P4 1428 aa8.55□□□□□ -1.04
MATR3-230ENST00000394800 YTHDC1Q96MU7 727 aaKnown RBP8.55□□□□□ -1.04
MATR3-230ENST00000394800 RAD54L2Q9Y4B4 1467 aa8.54□□□□□ -1.04
MATR3-230ENST00000394800 TAOK2Q9UL54 1235 aa8.54□□□□□ -1.04
MATR3-230ENST00000394800 TOPBP1Q92547 1522 aa8.53□□□□□ -1.04
MATR3-230ENST00000394800 ARAP1Q96P48 1450 aa8.53□□□□□ -1.04
MATR3-230ENST00000394800 POLA1P09884 1462 aaPredicted RBP8.52□□□□□ -1.05
MATR3-230ENST00000394800 GLIPR1L2Q4G1C9 344 aa8.51□□□□□ -1.05
MATR3-230ENST00000394800 URB2Q14146 1524 aaKnown RBP8.5□□□□□ -1.05
MATR3-230ENST00000394800 DNMBPQ6XZF7 1577 aa8.5□□□□□ -1.05
MATR3-230ENST00000394800 CARMIL1Q5VZK9 1371 aa8.5□□□□□ -1.05
MATR3-230ENST00000394800 KLHL34Q8N239 644 aa8.5□□□□□ -1.05
MATR3-230ENST00000394800 LAMC3Q9Y6N6 1575 aa8.49□□□□□ -1.05
MATR3-230ENST00000394800 ARHGAP35Q9NRY4 1499 aa8.49□□□□□ -1.05
MATR3-230ENST00000394800 KANK4Q5T7N3 995 aaPredicted RBP8.48□□□□□ -1.05
MATR3-230ENST00000394800 SLC4A1APQ9BWU0 796 aaKnown RBP8.48□□□□□ -1.05
MATR3-230ENST00000394800 CCER1Q8TC90 406 aaPredicted RBP8.47□□□□□ -1.05
MATR3-230ENST00000394800 GTF3C3Q9Y5Q9 886 aa8.47□□□□□ -1.05
MATR3-230ENST00000394800 ABCA10Q8WWZ4 1543 aa8.47□□□□□ -1.05
MATR3-230ENST00000394800 KIF21AQ7Z4S6 1674 aa8.47□□□□□ -1.05
MATR3-230ENST00000394800 HNRNPUL2Q1KMD3 747 aaKnown RBP8.46□□□□□ -1.05
MATR3-230ENST00000394800 ZEB1P37275 1124 aaPredicted RBP8.46□□□□□ -1.05
MATR3-230ENST00000394800 TDRD9Q8NDG6 1382 aaKnown RBP8.46□□□□□ -1.05
MATR3-230ENST00000394800 PDS5BQ9NTI5 1447 aa8.44□□□□□ -1.06
MATR3-230ENST00000394800 P3H3Q8IVL6 736 aa8.43□□□□□ -1.06
MATR3-230ENST00000394800 A0A0U1RQG5 324 aaPredicted RBP8.43□□□□□ -1.06
MATR3-230ENST00000394800 WDR97A6NE52 1622 aa8.41□□□□□ -1.06
MATR3-230ENST00000394800 PLEKHG5O94827 1062 aa8.41□□□□□ -1.06
MATR3-230ENST00000394800 ABCA5Q8WWZ7 1642 aa8.38□□□□□ -1.07
MATR3-230ENST00000394800 GAPVD1Q14C86 1478 aa8.38□□□□□ -1.07
MATR3-230ENST00000394800 TARBP1Q13395 1621 aaKnown RBP8.38□□□□□ -1.07
MATR3-230ENST00000394800 FHOD3Q2V2M9 1422 aa8.37□□□□□ -1.07
MATR3-230ENST00000394800 AQRO60306 1485 aaKnown RBP eCLIP8.36□□□□□ -1.072e-7■■■■□ 23.3
MATR3-230ENST00000394800 CUL7Q14999 1698 aa8.36□□□□□ -1.07
MATR3-230ENST00000394800 RTL5Q5HYW3 569 aaPredicted RBP8.34□□□□□ -1.07
MATR3-230ENST00000394800 ATP1B4Q9UN42 357 aaPredicted RBP8.34□□□□□ -1.07
MATR3-230ENST00000394800 PCF11O94913 1555 aaKnown RBP8.33□□□□□ -1.08
MATR3-230ENST00000394800 TIAM1Q13009 1591 aa8.33□□□□□ -1.08
MATR3-230ENST00000394800 CTTNBP2Q8WZ74 1663 aa8.33□□□□□ -1.08
MATR3-230ENST00000394800 ZNF608Q9ULD9 1512 aaPredicted RBP8.33□□□□□ -1.08
MATR3-230ENST00000394800 ITGAEP38570 1179 aa8.32□□□□□ -1.08
MATR3-230ENST00000394800 PDE4CQ08493 712 aa8.32□□□□□ -1.08
MATR3-230ENST00000394800 RRBP1Q9P2E9 1410 aaKnown RBP8.32□□□□□ -1.08
MATR3-230ENST00000394800 MRC2Q9UBG0 1479 aa8.31□□□□□ -1.08
MATR3-230ENST00000394800 NBR1Q14596 966 aa8.31□□□□□ -1.08
MATR3-230ENST00000394800 PHLDB1Q86UU1 1377 aa8.31□□□□□ -1.08
MATR3-230ENST00000394800 LRRC9Q6ZRR7 1453 aa8.31□□□□□ -1.08
MATR3-230ENST00000394800 CCNB3Q8WWL7 1395 aa8.3□□□□□ -1.08
MATR3-230ENST00000394800 FHAD1B1AJZ9 1412 aa8.3□□□□□ -1.08
MATR3-230ENST00000394800 PBRM1Q86U86 1689 aa8.29□□□□□ -1.08
MATR3-230ENST00000394800 PDIA4P13667 645 aaKnown RBP8.28□□□□□ -1.08
MATR3-230ENST00000394800 MAP3K1Q13233 1512 aa8.28□□□□□ -1.08
MATR3-230ENST00000394800 CLSPNQ9HAW4 1339 aa8.28□□□□□ -1.08
MATR3-230ENST00000394800 EFCAB5A4FU69 1503 aa8.28□□□□□ -1.08
MATR3-230ENST00000394800 LRRIQ1Q96JM4 1722 aa8.28□□□□□ -1.08
MATR3-230ENST00000394800 ZNF526Q8TF50 670 aaPredicted RBP8.27□□□□□ -1.09
MATR3-230ENST00000394800 SNAPC4Q5SXM2 1469 aa8.27□□□□□ -1.09
MATR3-230ENST00000394800 SAMD9Q5K651 1589 aa8.27□□□□□ -1.09
MATR3-230ENST00000394800 CASKIN1Q8WXD9 1431 aa8.27□□□□□ -1.09
MATR3-230ENST00000394800 CFAP43Q8NDM7 1665 aa8.26□□□□□ -1.09
MATR3-230ENST00000394800 DHX57Q6P158 1386 aaKnown RBP8.26□□□□□ -1.09
MATR3-230ENST00000394800 CFAP44Q96MT7 982 aa8.26□□□□□ -1.09
MATR3-230ENST00000394800 WDR62O43379 1518 aa8.26□□□□□ -1.09
MATR3-230ENST00000394800 ZNF326Q5BKZ1 582 aaKnown RBP8.26□□□□□ -1.09
MATR3-230ENST00000394800 ARID4BQ4LE39 1312 aaPredicted RBP8.26□□□□□ -1.09
MATR3-230ENST00000394800 FYCO1Q9BQS8 1478 aa8.26□□□□□ -1.09
MATR3-230ENST00000394800 HMGB1P09429 215 aaKnown RBP8.26□□□□□ -1.09
MATR3-230ENST00000394800 ADAMTS12P58397 1594 aa8.25□□□□□ -1.09
MATR3-230ENST00000394800 ERCC6Q03468 1493 aa8.25□□□□□ -1.09
MATR3-230ENST00000394800 GRIN2BQ13224 1484 aa8.25□□□□□ -1.09
MATR3-230ENST00000394800 FMN1Q68DA7 1419 aa8.24□□□□□ -1.09
MATR3-230ENST00000394800 PKNOX2Q96KN3 472 aa8.24□□□□□ -1.09
MATR3-230ENST00000394800 IFT140Q96RY7 1462 aa8.23□□□□□ -1.09
MATR3-230ENST00000394800 FAM50AQ14320 339 aaKnown RBP8.23□□□□□ -1.09
MATR3-230ENST00000394800 THOC2Q8NI27 1593 aaKnown RBP8.23□□□□□ -1.09
MATR3-230ENST00000394800 EIF4G3O43432 1585 aaKnown RBP8.22□□□□□ -1.09
MATR3-230ENST00000394800 FKBP8Q14318 412 aa8.22□□□□□ -1.09
MATR3-230ENST00000394800 ARID3CA6NKF2 412 aa8.22□□□□□ -1.09
MATR3-230ENST00000394800 IQGAP2Q13576 1575 aa8.22□□□□□ -1.09
MATR3-230ENST00000394800 RAB3GAP2Q9H2M9 1393 aa8.21□□□□□ -1.09
MATR3-230ENST00000394800 MAGI3Q5TCQ9 1506 aa8.21□□□□□ -1.1
MATR3-230ENST00000394800 AEBP2Q6ZN18 517 aaPredicted RBP8.2□□□□□ -1.1
MATR3-230ENST00000394800 MTUS2Q5JR59 1369 aa8.2□□□□□ -1.1
MATR3-230ENST00000394800 DIEXFQ68CQ4 756 aaKnown RBP8.2□□□□□ -1.1
MATR3-230ENST00000394800 CCDC136Q96JN2 1154 aa8.2□□□□□ -1.1
MATR3-230ENST00000394800 ZNF316A6NFI3 1004 aaPredicted RBP8.18□□□□□ -1.1
MATR3-230ENST00000394800 GRIN2AQ12879 1464 aa8.18□□□□□ -1.1
MATR3-230ENST00000394800 FBLN2P98095 1184 aa8.18□□□□□ -1.1
MATR3-230ENST00000394800 PTPRKQ15262 1439 aa8.18□□□□□ -1.1
MATR3-230ENST00000394800 FGD6Q6ZV73 1430 aa8.17□□□□□ -1.1
MATR3-230ENST00000394800 CDK13Q14004 1512 aaKnown RBP8.17□□□□□ -1.1
MATR3-230ENST00000394800 DISP1Q96F81 1524 aa8.17□□□□□ -1.1
MATR3-230ENST00000394800 NCOA2Q15596 1464 aa8.16□□□□□ -1.1
MATR3-230ENST00000394800 PLCB2Q00722 1185 aa8.16□□□□□ -1.1
MATR3-230ENST00000394800 KIAA0586Q9BVV6 1533 aa8.16□□□□□ -1.1
MATR3-230ENST00000394800 SETD5Q9C0A6 1442 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms