RNA–Protein interactions for RNA: ENST00000394767.2

CXXC4-201, Transcript of CXXC finger protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CXXC4, Length 5,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-201ENST00000394767 FHAD1B1AJZ9 1412 aa27.71■■■□□ 2.03
CXXC4-201ENST00000394767 SLC4A1APQ9BWU0 796 aaKnown RBP27.69■■■□□ 2.02
CXXC4-201ENST00000394767 GAPVD1Q14C86 1478 aa27.69■■■□□ 2.02
CXXC4-201ENST00000394767 BCANQ96GW7 911 aa27.68■■■□□ 2.02
CXXC4-201ENST00000394767 AQRO60306 1485 aaKnown RBP eCLIP27.66■■■□□ 2.02
CXXC4-201ENST00000394767 TRHP20396 242 aaPredicted RBP27.66■■■□□ 2.02
CXXC4-201ENST00000394767 MRC2Q9UBG0 1479 aa27.65■■■□□ 2.02
CXXC4-201ENST00000394767 OSCARQ8IYS5 282 aa27.65■■■□□ 2.02
CXXC4-201ENST00000394767 CHGAP10645 457 aaKnown RBP27.6■■■□□ 2.01
CXXC4-201ENST00000394767 IGF1RP08069 1367 aa27.59■■■□□ 2.01
CXXC4-201ENST00000394767 RRP7BPQ9NSQ0 103 aa27.59■■■□□ 2.01
CXXC4-201ENST00000394767 STAG3Q9UJ98 1225 aa27.57■■■□□ 2
CXXC4-201ENST00000394767 PEG3Q9GZU2 1588 aa27.51■■□□□ 1.99
CXXC4-201ENST00000394767 TOPBP1Q92547 1522 aa27.51■■□□□ 1.99
CXXC4-201ENST00000394767 CCNB3Q8WWL7 1395 aa27.48■■□□□ 1.99
CXXC4-201ENST00000394767 LAMC3Q9Y6N6 1575 aa27.48■■□□□ 1.99
CXXC4-201ENST00000394767 FMN1Q68DA7 1419 aa27.47■■□□□ 1.99
CXXC4-201ENST00000394767 YTHDC1Q96MU7 727 aaKnown RBP27.46■■□□□ 1.99
CXXC4-201ENST00000394767 FHOD3Q2V2M9 1422 aa27.46■■□□□ 1.99
CXXC4-201ENST00000394767 CYB5RLQ6IPT4 315 aa27.44■■□□□ 1.98
CXXC4-201ENST00000394767 VPS8Q8N3P4 1428 aa27.44■■□□□ 1.98
CXXC4-201ENST00000394767 ARID4BQ4LE39 1312 aaPredicted RBP27.43■■□□□ 1.98
CXXC4-201ENST00000394767 SYNJ1O43426 1573 aa27.41■■□□□ 1.98
CXXC4-201ENST00000394767 IFT140Q96RY7 1462 aa27.41■■□□□ 1.98
CXXC4-201ENST00000394767 POLA1P09884 1462 aaPredicted RBP27.41■■□□□ 1.98
CXXC4-201ENST00000394767 GRIN2BQ13224 1484 aa27.4■■□□□ 1.98
CXXC4-201ENST00000394767 CENPBP07199 599 aaPredicted RBP27.39■■□□□ 1.98
CXXC4-201ENST00000394767 CUX1P39880 1505 aa27.39■■□□□ 1.98
CXXC4-201ENST00000394767 KANK4Q5T7N3 995 aaPredicted RBP27.34■■□□□ 1.97
CXXC4-201ENST00000394767 PTPRGP23470 1445 aa27.34■■□□□ 1.97
CXXC4-201ENST00000394767 TONSLQ96HA7 1378 aa27.32■■□□□ 1.96
CXXC4-201ENST00000394767 DNMBPQ6XZF7 1577 aa27.31■■□□□ 1.96
CXXC4-201ENST00000394767 TOP2BQ02880 1626 aa27.26■■□□□ 1.95
CXXC4-201ENST00000394767 PELP1Q8IZL8 1130 aaKnown RBP27.23■■□□□ 1.95
CXXC4-201ENST00000394767 EFCAB2Q5VUJ9 269 aa27.21■■□□□ 1.95
CXXC4-201ENST00000394767 KDM2AQ9Y2K7 1162 aa27.18■■□□□ 1.94
CXXC4-201ENST00000394767 ARHGAP35Q9NRY4 1499 aa27.15■■□□□ 1.94
CXXC4-201ENST00000394767 SNAPC4Q5SXM2 1469 aa27.14■■□□□ 1.94
CXXC4-201ENST00000394767 DIEXFQ68CQ4 756 aaKnown RBP27.13■■□□□ 1.93
CXXC4-201ENST00000394767 MLECQ14165 292 aa27.11■■□□□ 1.93
CXXC4-201ENST00000394767 SENP3Q9H4L4 574 aaPredicted RBP27.11■■□□□ 1.93
CXXC4-201ENST00000394767 URB2Q14146 1524 aaKnown RBP27.1■■□□□ 1.93
CXXC4-201ENST00000394767 RGL3Q3MIN7 710 aa27.05■■□□□ 1.92
CXXC4-201ENST00000394767 ACIN1Q9UKV3 1341 aaKnown RBP27.05■■□□□ 1.92
CXXC4-201ENST00000394767 ABCA10Q8WWZ4 1543 aa27.03■■□□□ 1.92
CXXC4-201ENST00000394767 PPP1R15AO75807 674 aaPredicted RBP27.02■■□□□ 1.92
CXXC4-201ENST00000394767 CCDC18Q5T9S5 1454 aa27.01■■□□□ 1.92
CXXC4-201ENST00000394767 PRG4Q92954 1404 aaPredicted RBP27.01■■□□□ 1.91
CXXC4-201ENST00000394767 ZNF316A6NFI3 1004 aaPredicted RBP27■■□□□ 1.91
CXXC4-201ENST00000394767 HNRNPMP52272 730 aaKnown RBP eCLIP27■■□□□ 1.91
CXXC4-201ENST00000394767 GGT6Q6P531 493 aa26.99■■□□□ 1.91
CXXC4-201ENST00000394767 NEFLP07196 543 aa26.99■■□□□ 1.91
CXXC4-201ENST00000394767 PRXQ9BXM0 1461 aa26.93■■□□□ 1.9
CXXC4-201ENST00000394767 ANP32CO43423 234 aa26.93■■□□□ 1.9
CXXC4-201ENST00000394767 ZNF608Q9ULD9 1512 aaPredicted RBP26.91■■□□□ 1.9
CXXC4-201ENST00000394767 ERICH3Q5RHP9 1530 aa26.9■■□□□ 1.9
CXXC4-201ENST00000394767 FAM69CQ0P6D2 419 aa26.88■■□□□ 1.89
CXXC4-201ENST00000394767 KANK1Q14678 1352 aa26.88■■□□□ 1.89
CXXC4-201ENST00000394767 SPAG9O60271 1321 aaKnown RBP26.86■■□□□ 1.89
CXXC4-201ENST00000394767 KIF21BO75037 1637 aa26.86■■□□□ 1.89
CXXC4-201ENST00000394767 RSPH4AQ5TD94 716 aa26.83■■□□□ 1.89
CXXC4-201ENST00000394767 ANKRD30AQ9BXX3 1397 aa26.81■■□□□ 1.88
CXXC4-201ENST00000394767 SYNJ2O15056 1496 aa26.8■■□□□ 1.88
CXXC4-201ENST00000394767 KIF3BO15066 747 aa26.8■■□□□ 1.88
CXXC4-201ENST00000394767 PRDM2Q13029 1718 aa26.79■■□□□ 1.88
CXXC4-201ENST00000394767 SIN3AQ96ST3 1273 aa26.78■■□□□ 1.88
CXXC4-201ENST00000394767 MAGI1Q96QZ7 1491 aaPredicted RBP26.76■■□□□ 1.87
CXXC4-201ENST00000394767 KIAA0586Q9BVV6 1533 aa26.75■■□□□ 1.87
CXXC4-201ENST00000394767 SETD5Q9C0A6 1442 aa26.75■■□□□ 1.87
CXXC4-201ENST00000394767 HIRIP3Q9BW71 556 aaPredicted RBP26.72■■□□□ 1.87
CXXC4-201ENST00000394767 PKD2Q13563 968 aa26.71■■□□□ 1.87
CXXC4-201ENST00000394767 C14orf37Q86TY3 774 aa26.7■■□□□ 1.86
CXXC4-201ENST00000394767 GRIN2AQ12879 1464 aa26.7■■□□□ 1.86
CXXC4-201ENST00000394767 NUP155O75694 1391 aa26.69■■□□□ 1.86
CXXC4-201ENST00000394767 ARAP1Q96P48 1450 aa26.69■■□□□ 1.86
CXXC4-201ENST00000394767 CASKIN1Q8WXD9 1431 aa26.67■■□□□ 1.86
CXXC4-201ENST00000394767 FOXD1Q16676 465 aa26.67■■□□□ 1.86
CXXC4-201ENST00000394767 DDX10Q13206 875 aaKnown RBP26.67■■□□□ 1.86
CXXC4-201ENST00000394767 EIF4G2P78344 907 aaKnown RBP eCLIP26.66■■□□□ 1.86
CXXC4-201ENST00000394767 BIVM-ERCC5R4GMW8 1640 aa26.65■■□□□ 1.86
CXXC4-201ENST00000394767 RAB3GAP2Q9H2M9 1393 aa26.6■■□□□ 1.85
CXXC4-201ENST00000394767 EFCAB5A4FU69 1503 aa26.6■■□□□ 1.85
CXXC4-201ENST00000394767 WASHC2CQ9Y4E1 1318 aa26.6■■□□□ 1.85
CXXC4-201ENST00000394767 ZNF644Q9H582 1327 aaPredicted RBP26.6■■□□□ 1.85
CXXC4-201ENST00000394767 CUL7Q14999 1698 aa26.59■■□□□ 1.85
CXXC4-201ENST00000394767 DCAF11Q8TEB1 546 aa26.59■■□□□ 1.85
CXXC4-201ENST00000394767 MPHOSPH9Q99550 1183 aa26.59■■□□□ 1.85
CXXC4-201ENST00000394767 NEFMP07197 916 aa26.58■■□□□ 1.85
CXXC4-201ENST00000394767 KIF21AQ7Z4S6 1674 aa26.58■■□□□ 1.85
CXXC4-201ENST00000394767 CARD11Q9BXL7 1154 aa26.57■■□□□ 1.84
CXXC4-201ENST00000394767 IQGAP2Q13576 1575 aa26.57■■□□□ 1.84
CXXC4-201ENST00000394767 HDGFP51858 240 aaKnown RBP26.54■■□□□ 1.84
CXXC4-201ENST00000394767 SLC24A1O60721 1099 aa26.52■■□□□ 1.84
CXXC4-201ENST00000394767 FYCO1Q9BQS8 1478 aa26.52■■□□□ 1.84
CXXC4-201ENST00000394767 TMC1Q8TDI8 760 aa26.51■■□□□ 1.83
CXXC4-201ENST00000394767 LRRC9Q6ZRR7 1453 aa26.51■■□□□ 1.83
CXXC4-201ENST00000394767 UACAQ9BZF9 1416 aa26.5■■□□□ 1.83
CXXC4-201ENST00000394767 CLSPNQ9HAW4 1339 aa26.5■■□□□ 1.83
CXXC4-201ENST00000394767 POGKQ9P215 609 aa26.49■■□□□ 1.83
CXXC4-201ENST00000394767 SCAF1Q9H7N4 1312 aaKnown RBP26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms