RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 RAB3GAP2Q9H2M9 1393 aa11.63□□□□□ -0.55
GABRA1-202ENST00000393943 MRS2Q9HD23 443 aa11.63□□□□□ -0.55
GABRA1-202ENST00000393943 FANCIQ9NVI1 1328 aa11.62□□□□□ -0.55
GABRA1-202ENST00000393943 RAPGEF2Q9Y4G8 1499 aa11.61□□□□□ -0.55
GABRA1-202ENST00000393943 ERICH3Q5RHP9 1530 aa11.6□□□□□ -0.55
GABRA1-202ENST00000393943 NOP58Q9Y2X3 529 aaKnown RBP11.6□□□□□ -0.55
GABRA1-202ENST00000393943 FAM9BQ8IZU0 186 aa11.59□□□□□ -0.55
GABRA1-202ENST00000393943 RUSC2Q8N2Y8 1516 aa11.59□□□□□ -0.55
GABRA1-202ENST00000393943 DDRGK1Q96HY6 314 aa11.59□□□□□ -0.55
GABRA1-202ENST00000393943 ARHGAP35Q9NRY4 1499 aa11.58□□□□□ -0.56
GABRA1-202ENST00000393943 RRBP1Q9P2E9 1410 aaKnown RBP11.57□□□□□ -0.56
GABRA1-202ENST00000393943 PPM1GO15355 546 aaPredicted RBP11.57□□□□□ -0.56
GABRA1-202ENST00000393943 PPP1R15AO75807 674 aaPredicted RBP11.56□□□□□ -0.56
GABRA1-202ENST00000393943 KANK4Q5T7N3 995 aaPredicted RBP11.55□□□□□ -0.56
GABRA1-202ENST00000393943 P3H3Q8IVL6 736 aa11.55□□□□□ -0.56
GABRA1-202ENST00000393943 NBR1Q14596 966 aa11.53□□□□□ -0.56
GABRA1-202ENST00000393943 SIN3AQ96ST3 1273 aa11.53□□□□□ -0.56
GABRA1-202ENST00000393943 TMC1Q8TDI8 760 aa11.53□□□□□ -0.56
GABRA1-202ENST00000393943 DEKP35659 375 aaKnown RBP11.51□□□□□ -0.57
GABRA1-202ENST00000393943 CARMIL1Q5VZK9 1371 aa11.5□□□□□ -0.57
GABRA1-202ENST00000393943 IRX6P78412 446 aaPredicted RBP11.5□□□□□ -0.57
GABRA1-202ENST00000393943 GLIPR1L2Q4G1C9 344 aa11.5□□□□□ -0.57
GABRA1-202ENST00000393943 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.49□□□□□ -0.57
GABRA1-202ENST00000393943 NPM2Q86SE8 214 aaKnown RBP11.49□□□□□ -0.57
GABRA1-202ENST00000393943 CNGB1Q14028 1251 aaPredicted RBP11.48□□□□□ -0.57
GABRA1-202ENST00000393943 HIRIP3Q9BW71 556 aaPredicted RBP11.48□□□□□ -0.57
GABRA1-202ENST00000393943 FMN1Q68DA7 1419 aa11.48□□□□□ -0.57
GABRA1-202ENST00000393943 EIF4G1Q04637 1599 aaKnown RBP11.48□□□□□ -0.57
GABRA1-202ENST00000393943 ATAD2BQ9ULI0 1458 aa11.47□□□□□ -0.57
GABRA1-202ENST00000393943 CUX2O14529 1486 aa11.46□□□□□ -0.57
GABRA1-202ENST00000393943 ZNF326Q5BKZ1 582 aaKnown RBP11.46□□□□□ -0.57
GABRA1-202ENST00000393943 USP35Q9P2H5 1018 aa11.43□□□□□ -0.58
GABRA1-202ENST00000393943 SYNJ1O43426 1573 aa11.43□□□□□ -0.58
GABRA1-202ENST00000393943 PRXQ9BXM0 1461 aa11.42□□□□□ -0.58
GABRA1-202ENST00000393943 UPF2Q9HAU5 1272 aaKnown RBP11.42□□□□□ -0.58
GABRA1-202ENST00000393943 TOP2BQ02880 1626 aa11.42□□□□□ -0.58
GABRA1-202ENST00000393943 MAP3K1Q13233 1512 aa11.41□□□□□ -0.58
GABRA1-202ENST00000393943 IPO9Q96P70 1041 aaKnown RBP11.41□□□□□ -0.58
GABRA1-202ENST00000393943 ZBED9Q6R2W3 1325 aa11.41□□□□□ -0.58
GABRA1-202ENST00000393943 B4GALNT3Q6L9W6 998 aa11.41□□□□□ -0.58
GABRA1-202ENST00000393943 ARAP1Q96P48 1450 aa11.4□□□□□ -0.58
GABRA1-202ENST00000393943 TCERG1O14776 1098 aaKnown RBP11.4□□□□□ -0.58
GABRA1-202ENST00000393943 HSPA5P11021 654 aaKnown RBP11.4□□□□□ -0.58
GABRA1-202ENST00000393943 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.39□□□□□ -0.59
GABRA1-202ENST00000393943 SLC4A1APQ9BWU0 796 aaKnown RBP11.39□□□□□ -0.59
GABRA1-202ENST00000393943 LRRC9Q6ZRR7 1453 aa11.38□□□□□ -0.59
GABRA1-202ENST00000393943 CHIC2Q9UKJ5 165 aa11.38□□□□□ -0.59
GABRA1-202ENST00000393943 RRP7BPQ9NSQ0 103 aa11.37□□□□□ -0.59
GABRA1-202ENST00000393943 ROCK2O75116 1388 aaKnown RBP11.37□□□□□ -0.59
GABRA1-202ENST00000393943 NUDCQ9Y266 331 aa11.37□□□□□ -0.59
GABRA1-202ENST00000393943 UACAQ9BZF9 1416 aa11.37□□□□□ -0.59
GABRA1-202ENST00000393943 CCDC18Q5T9S5 1454 aa11.37□□□□□ -0.59
GABRA1-202ENST00000393943 EIF5BO60841 1220 aaKnown RBP11.36□□□□□ -0.59
GABRA1-202ENST00000393943 NEFMP07197 916 aa11.36□□□□□ -0.59
GABRA1-202ENST00000393943 BECN1Q14457 450 aa11.36□□□□□ -0.59
GABRA1-202ENST00000393943 KCNH8Q96L42 1107 aa11.36□□□□□ -0.59
GABRA1-202ENST00000393943 CUX1P39880 1505 aa11.36□□□□□ -0.59
GABRA1-202ENST00000393943 CANXP27824 592 aaKnown RBP11.36□□□□□ -0.59
GABRA1-202ENST00000393943 TIAM1Q13009 1591 aa11.33□□□□□ -0.6
GABRA1-202ENST00000393943 PEG3Q9GZU2 1588 aa11.33□□□□□ -0.6
GABRA1-202ENST00000393943 PDE3BQ13370 1112 aa11.33□□□□□ -0.6
GABRA1-202ENST00000393943 ARID4BQ4LE39 1312 aaPredicted RBP11.33□□□□□ -0.6
GABRA1-202ENST00000393943 CNTLNQ9NXG0 1405 aa11.32□□□□□ -0.6
GABRA1-202ENST00000393943 RALBP1Q15311 655 aa11.31□□□□□ -0.6
GABRA1-202ENST00000393943 WDR43Q15061 677 aaKnown RBP eCLIP11.31□□□□□ -0.6
GABRA1-202ENST00000393943 ANP32BQ92688 251 aaKnown RBP11.31□□□□□ -0.6
GABRA1-202ENST00000393943 FYCO1Q9BQS8 1478 aa11.31□□□□□ -0.6
GABRA1-202ENST00000393943 PRKRIP1Q9H875 184 aaPredicted RBP11.3□□□□□ -0.6
GABRA1-202ENST00000393943 EFCAB5A4FU69 1503 aa11.3□□□□□ -0.6
GABRA1-202ENST00000393943 FGD6Q6ZV73 1430 aa11.3□□□□□ -0.6
GABRA1-202ENST00000393943 MS4A1P11836 297 aa11.29□□□□□ -0.6
GABRA1-202ENST00000393943 CASKIN1Q8WXD9 1431 aa11.28□□□□□ -0.6
GABRA1-202ENST00000393943 TSPY4P0CV99 314 aa11.28□□□□□ -0.6
GABRA1-202ENST00000393943 TSPY10P0CW01 314 aa11.28□□□□□ -0.6
GABRA1-202ENST00000393943 PHLDB1Q86UU1 1377 aa11.28□□□□□ -0.6
GABRA1-202ENST00000393943 MPHOSPH9Q99550 1183 aa11.27□□□□□ -0.61
GABRA1-202ENST00000393943 WDR97A6NE52 1622 aa11.27□□□□□ -0.61
GABRA1-202ENST00000393943 CDCA8Q53HL2 280 aa11.27□□□□□ -0.61
GABRA1-202ENST00000393943 CARD11Q9BXL7 1154 aa11.26□□□□□ -0.61
GABRA1-202ENST00000393943 IGF1RP08069 1367 aa11.26□□□□□ -0.61
GABRA1-202ENST00000393943 L1TD1Q5T7N2 865 aaKnown RBP11.26□□□□□ -0.61
GABRA1-202ENST00000393943 KTN1Q86UP2 1357 aaKnown RBP11.25□□□□□ -0.61
GABRA1-202ENST00000393943 FHOD3Q2V2M9 1422 aa11.25□□□□□ -0.61
GABRA1-202ENST00000393943 BIVM-ERCC5R4GMW8 1640 aa11.25□□□□□ -0.61
GABRA1-202ENST00000393943 ZNF777Q9ULD5 760 aaPredicted RBP11.25□□□□□ -0.61
GABRA1-202ENST00000393943 HFM1A2PYH4 1435 aa11.24□□□□□ -0.61
GABRA1-202ENST00000393943 MYOM3Q5VTT5 1437 aa11.24□□□□□ -0.61
GABRA1-202ENST00000393943 RCAN3Q9UKA8 241 aa11.24□□□□□ -0.61
GABRA1-202ENST00000393943 LAS1LQ9Y4W2 734 aaKnown RBP11.24□□□□□ -0.61
GABRA1-202ENST00000393943 SLC24A1O60721 1099 aa11.24□□□□□ -0.61
GABRA1-202ENST00000393943 CADPSQ9ULU8 1353 aa11.24□□□□□ -0.61
GABRA1-202ENST00000393943 CCDC7Q96M83 1385 aa11.23□□□□□ -0.61
GABRA1-202ENST00000393943 NCAPD3P42695 1498 aa11.23□□□□□ -0.61
GABRA1-202ENST00000393943 KIF15Q9NS87 1388 aa11.23□□□□□ -0.61
GABRA1-202ENST00000393943 L3MBTL2Q969R5 705 aa11.23□□□□□ -0.61
GABRA1-202ENST00000393943 AQRO60306 1485 aaKnown RBP eCLIP11.21□□□□□ -0.61
GABRA1-202ENST00000393943 HMGXB3Q12766 1538 aa11.21□□□□□ -0.61
GABRA1-202ENST00000393943 CFDP1Q9UEE9 299 aaPredicted RBP11.2□□□□□ -0.62
GABRA1-202ENST00000393943 SALL2Q9Y467 1007 aaPredicted RBP11.2□□□□□ -0.62
GABRA1-202ENST00000393943 FGD5Q6ZNL6 1462 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms