RNA–Protein interactions for RNA: ENST00000392937.10

BACE1-202, Transcript of beta-secretase 1, humanhuman

TSL 1 (best) BASIC

Gene BACE1, Length 5,155 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BACE1-202ENST00000392937 CHIC2Q9UKJ5 165 aa12.2□□□□□ -0.46
BACE1-202ENST00000392937 TIMELESSQ9UNS1 1208 aa12.19□□□□□ -0.46
BACE1-202ENST00000392937 STAG3Q9UJ98 1225 aa12.18□□□□□ -0.46
BACE1-202ENST00000392937 CARMIL2Q6F5E8 1435 aa12.17□□□□□ -0.46
BACE1-202ENST00000392937 CNGB1Q14028 1251 aaPredicted RBP12.17□□□□□ -0.46
BACE1-202ENST00000392937 CC2D2AQ9P2K1 1620 aa12.16□□□□□ -0.46
BACE1-202ENST00000392937 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.15□□□□□ -0.47
BACE1-202ENST00000392937 CFDP1Q9UEE9 299 aaPredicted RBP12.15□□□□□ -0.47
BACE1-202ENST00000392937 CHGAP10645 457 aaKnown RBP12.14□□□□□ -0.47
BACE1-202ENST00000392937 RTL5Q5HYW3 569 aaPredicted RBP12.13□□□□□ -0.47
BACE1-202ENST00000392937 CCNB3Q8WWL7 1395 aa12.13□□□□□ -0.47
BACE1-202ENST00000392937 PLPPR3Q6T4P5 718 aa12.13□□□□□ -0.47
BACE1-202ENST00000392937 BICRAQ9NZM4 1560 aa12.1□□□□□ -0.47
BACE1-202ENST00000392937 SCAF1Q9H7N4 1312 aaKnown RBP12.1□□□□□ -0.47
BACE1-202ENST00000392937 HMGXB3Q12766 1538 aa12.1□□□□□ -0.47
BACE1-202ENST00000392937 RAPGEF2Q9Y4G8 1499 aa12.08□□□□□ -0.48
BACE1-202ENST00000392937 TRHP20396 242 aaPredicted RBP12.07□□□□□ -0.48
BACE1-202ENST00000392937 KIF21BO75037 1637 aa12.07□□□□□ -0.48
BACE1-202ENST00000392937 MIER1Q8N108 512 aa12.06□□□□□ -0.48
BACE1-202ENST00000392937 RRP7BPQ9NSQ0 103 aa12.05□□□□□ -0.48
BACE1-202ENST00000392937 ARHGAP35Q9NRY4 1499 aa12.05□□□□□ -0.48
BACE1-202ENST00000392937 CFTRP13569 1480 aa12.05□□□□□ -0.48
BACE1-202ENST00000392937 JPH4Q96JJ6 628 aa12.04□□□□□ -0.48
BACE1-202ENST00000392937 FGD5Q6ZNL6 1462 aa12.04□□□□□ -0.48
BACE1-202ENST00000392937 ARID4BQ4LE39 1312 aaPredicted RBP12.04□□□□□ -0.48
BACE1-202ENST00000392937 OSCARQ8IYS5 282 aa12.03□□□□□ -0.48
BACE1-202ENST00000392937 FMN1Q68DA7 1419 aa12.03□□□□□ -0.48
BACE1-202ENST00000392937 SETD5Q9C0A6 1442 aa12.03□□□□□ -0.48
BACE1-202ENST00000392937 DDX10Q13206 875 aaKnown RBP12.02□□□□□ -0.48
BACE1-202ENST00000392937 EIF4G2P78344 907 aaKnown RBP eCLIP12.01□□□□□ -0.49
BACE1-202ENST00000392937 GAPVD1Q14C86 1478 aa12.01□□□□□ -0.49
BACE1-202ENST00000392937 ERICH3Q5RHP9 1530 aa11.99□□□□□ -0.49
BACE1-202ENST00000392937 FKBP8Q14318 412 aa11.99□□□□□ -0.49
BACE1-202ENST00000392937 DNAJC5BQ9UF47 199 aa11.99□□□□□ -0.49
BACE1-202ENST00000392937 NESP48681 1621 aa11.99□□□□□ -0.49
BACE1-202ENST00000392937 ANP32AP39687 249 aaKnown RBP11.99□□□□□ -0.49
BACE1-202ENST00000392937 MRC2Q9UBG0 1479 aa11.98□□□□□ -0.49
BACE1-202ENST00000392937 RAD54L2Q9Y4B4 1467 aa11.98□□□□□ -0.49
BACE1-202ENST00000392937 HNRNPUQ00839 825 aaKnown RBP eCLIP11.97□□□□□ -0.49
BACE1-202ENST00000392937 CCER2I3L3R5 266 aa11.95□□□□□ -0.5
BACE1-202ENST00000392937 IGF1RP08069 1367 aa11.94□□□□□ -0.5
BACE1-202ENST00000392937 AQRO60306 1485 aaKnown RBP eCLIP11.93□□□□□ -0.5
BACE1-202ENST00000392937 EFCAB2Q5VUJ9 269 aa11.92□□□□□ -0.5
BACE1-202ENST00000392937 PPP1R15AO75807 674 aaPredicted RBP11.92□□□□□ -0.5
BACE1-202ENST00000392937 KDM2AQ9Y2K7 1162 aa11.92□□□□□ -0.5
BACE1-202ENST00000392937 PTPRGP23470 1445 aa11.91□□□□□ -0.5
BACE1-202ENST00000392937 FHOD3Q2V2M9 1422 aa11.91□□□□□ -0.5
BACE1-202ENST00000392937 IFT140Q96RY7 1462 aa11.91□□□□□ -0.5
BACE1-202ENST00000392937 GRIN2BQ13224 1484 aa11.9□□□□□ -0.5
BACE1-202ENST00000392937 RUSC2Q8N2Y8 1516 aa11.9□□□□□ -0.5
BACE1-202ENST00000392937 NEFMP07197 916 aa11.89□□□□□ -0.51
BACE1-202ENST00000392937 CYB5RLQ6IPT4 315 aa11.89□□□□□ -0.51
BACE1-202ENST00000392937 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.89□□□□□ -0.51
BACE1-202ENST00000392937 MRS2Q9HD23 443 aa11.88□□□□□ -0.51
BACE1-202ENST00000392937 UNC13AQ9UPW8 1703 aa11.88□□□□□ -0.51
BACE1-202ENST00000392937 LAMC3Q9Y6N6 1575 aa11.88□□□□□ -0.51
BACE1-202ENST00000392937 TOP2BQ02880 1626 aa11.87□□□□□ -0.51
BACE1-202ENST00000392937 TOPBP1Q92547 1522 aa11.87□□□□□ -0.51
BACE1-202ENST00000392937 TMC1Q8TDI8 760 aa11.87□□□□□ -0.51
BACE1-202ENST00000392937 RAB3GAP2Q9H2M9 1393 aa11.87□□□□□ -0.51
BACE1-202ENST00000392937 KANK1Q14678 1352 aa11.86□□□□□ -0.51
BACE1-202ENST00000392937 CANXP27824 592 aaKnown RBP11.86□□□□□ -0.51
BACE1-202ENST00000392937 ERICH6BQ5W0A0 696 aa11.85□□□□□ -0.51
BACE1-202ENST00000392937 CUX1P39880 1505 aa11.85□□□□□ -0.51
BACE1-202ENST00000392937 KANK4Q5T7N3 995 aaPredicted RBP11.84□□□□□ -0.51
BACE1-202ENST00000392937 FAM9BQ8IZU0 186 aa11.84□□□□□ -0.51
BACE1-202ENST00000392937 PEG3Q9GZU2 1588 aa11.84□□□□□ -0.51
BACE1-202ENST00000392937 RGL3Q3MIN7 710 aa11.84□□□□□ -0.51
BACE1-202ENST00000392937 CDCA8Q53HL2 280 aa11.84□□□□□ -0.51
BACE1-202ENST00000392937 CCDC18Q5T9S5 1454 aa11.83□□□□□ -0.51
BACE1-202ENST00000392937 SLC24A1O60721 1099 aa11.83□□□□□ -0.52
BACE1-202ENST00000392937 DHX57Q6P158 1386 aaKnown RBP11.82□□□□□ -0.52
BACE1-202ENST00000392937 MLECQ14165 292 aa11.82□□□□□ -0.52
BACE1-202ENST00000392937 RSPH4AQ5TD94 716 aa11.82□□□□□ -0.52
BACE1-202ENST00000392937 POLA1P09884 1462 aaPredicted RBP11.82□□□□□ -0.52
BACE1-202ENST00000392937 ZBTB47Q9UFB7 747 aaPredicted RBP11.81□□□□□ -0.52
BACE1-202ENST00000392937 SYNJ1O43426 1573 aa11.81□□□□□ -0.52
BACE1-202ENST00000392937 DNMBPQ6XZF7 1577 aa11.81□□□□□ -0.52
BACE1-202ENST00000392937 CCDC136Q96JN2 1154 aa11.8□□□□□ -0.52
BACE1-202ENST00000392937 EFCAB5A4FU69 1503 aa11.8□□□□□ -0.52
BACE1-202ENST00000392937 GGT6Q6P531 493 aa11.79□□□□□ -0.52
BACE1-202ENST00000392937 C14orf37Q86TY3 774 aa11.78□□□□□ -0.52
BACE1-202ENST00000392937 WDR43Q15061 677 aaKnown RBP eCLIP11.78□□□□□ -0.52
BACE1-202ENST00000392937 ANKRD30AQ9BXX3 1397 aa11.77□□□□□ -0.52
BACE1-202ENST00000392937 HDGFP51858 240 aaKnown RBP11.77□□□□□ -0.52
BACE1-202ENST00000392937 RRBP1Q9P2E9 1410 aaKnown RBP11.77□□□□□ -0.53
BACE1-202ENST00000392937 SENP3Q9H4L4 574 aaPredicted RBP11.76□□□□□ -0.53
BACE1-202ENST00000392937 PPP4R2Q9NY27 417 aa11.76□□□□□ -0.53
BACE1-202ENST00000392937 SUPT16HQ9Y5B9 1047 aaKnown RBP11.76□□□□□ -0.53
BACE1-202ENST00000392937 SPAG9O60271 1321 aaKnown RBP11.76□□□□□ -0.53
BACE1-202ENST00000392937 SIN3AQ96ST3 1273 aa11.75□□□□□ -0.53
BACE1-202ENST00000392937 FYCO1Q9BQS8 1478 aa11.75□□□□□ -0.53
BACE1-202ENST00000392937 PRXQ9BXM0 1461 aa11.75□□□□□ -0.53
BACE1-202ENST00000392937 HNRNPMP52272 730 aaKnown RBP eCLIP11.75□□□□□ -0.53
BACE1-202ENST00000392937 UPF2Q9HAU5 1272 aaKnown RBP11.75□□□□□ -0.53
BACE1-202ENST00000392937 DDRGK1Q96HY6 314 aa11.74□□□□□ -0.53
BACE1-202ENST00000392937 SNAPC4Q5SXM2 1469 aa11.73□□□□□ -0.53
BACE1-202ENST00000392937 CASKIN1Q8WXD9 1431 aa11.72□□□□□ -0.53
BACE1-202ENST00000392937 LRRC9Q6ZRR7 1453 aa11.72□□□□□ -0.53
BACE1-202ENST00000392937 PRG4Q92954 1404 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms