RNA–Protein interactions for RNA: ENST00000392590.3

CDCA4-202, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-202ENST00000392590 CSRNP3Q8WYN3 585 aa34.65■■■■□ 3.14
CDCA4-202ENST00000392590 KIAA0586Q9BVV6 1533 aa34.64■■■■□ 3.14
CDCA4-202ENST00000392590 EEA1Q15075 1411 aa34.62■■■■□ 3.13
CDCA4-202ENST00000392590 ARAP1Q96P48 1450 aa34.62■■■■□ 3.13
CDCA4-202ENST00000392590 FAM9AQ8IZU1 332 aaPredicted RBP34.59■■■■□ 3.13
CDCA4-202ENST00000392590 PRXQ9BXM0 1461 aa34.57■■■■□ 3.13
CDCA4-202ENST00000392590 SHROOM2Q13796 1616 aa34.57■■■■□ 3.12
CDCA4-202ENST00000392590 PRG4Q92954 1404 aaPredicted RBP34.55■■■■□ 3.12
CDCA4-202ENST00000392590 ERCC6L2Q5T890 1561 aa34.51■■■■□ 3.12
CDCA4-202ENST00000392590 IQGAP2Q13576 1575 aa34.39■■■■□ 3.1
CDCA4-202ENST00000392590 CARMIL2Q6F5E8 1435 aa34.29■■■■□ 3.08
CDCA4-202ENST00000392590 UGGT2Q9NYU1 1516 aa34.22■■■■□ 3.07
CDCA4-202ENST00000392590 CTTNBP2Q8WZ74 1663 aa34.2■■■■□ 3.07
CDCA4-202ENST00000392590 DISP1Q96F81 1524 aa34.17■■■■□ 3.06
CDCA4-202ENST00000392590 TNIKQ9UKE5 1360 aa34.17■■■■□ 3.06
CDCA4-202ENST00000392590 PTPRGP23470 1445 aa34.17■■■■□ 3.06
CDCA4-202ENST00000392590 KIF21BO75037 1637 aa34.17■■■■□ 3.06
CDCA4-202ENST00000392590 TTBK1Q5TCY1 1321 aaPredicted RBP34.17■■■■□ 3.06
CDCA4-202ENST00000392590 EHMT2Q96KQ7 1210 aa34.14■■■■□ 3.06
CDCA4-202ENST00000392590 GOLGA3Q08378 1498 aa34.08■■■■□ 3.05
CDCA4-202ENST00000392590 UBTFP17480 764 aaKnown RBP34.07■■■■□ 3.04
CDCA4-202ENST00000392590 KIAA0556O60303 1618 aa34.05■■■■□ 3.04
CDCA4-202ENST00000392590 RANGAP1P46060 587 aaPredicted RBP34.01■■■■□ 3.04
CDCA4-202ENST00000392590 NPM1P06748 294 aaKnown RBP eCLIP33.99■■■■□ 3.03
CDCA4-202ENST00000392590 TRHP20396 242 aaPredicted RBP33.98■■■■□ 3.03
CDCA4-202ENST00000392590 P3H3Q8IVL6 736 aa33.97■■■■□ 3.03
CDCA4-202ENST00000392590 UACAQ9BZF9 1416 aa33.92■■■■□ 3.02
CDCA4-202ENST00000392590 ADCY10Q96PN6 1610 aa33.91■■■■□ 3.02
CDCA4-202ENST00000392590 UHRF1BP1LA0JNW5 1464 aa33.84■■■■□ 3.01
CDCA4-202ENST00000392590 SAMD9Q5K651 1589 aa33.83■■■■□ 3.01
CDCA4-202ENST00000392590 ABCC2Q92887 1545 aa33.79■■■■□ 3
CDCA4-202ENST00000392590 PLB1Q6P1J6 1458 aa33.78■■■■□ 3
CDCA4-202ENST00000392590 FHOD3Q2V2M9 1422 aa33.73■■■□□ 2.99
CDCA4-202ENST00000392590 EFCAB5A4FU69 1503 aa33.73■■■□□ 2.99
CDCA4-202ENST00000392590 MAPKBP1O60336 1514 aa33.71■■■□□ 2.99
CDCA4-202ENST00000392590 ABCA8O94911 1581 aa33.69■■■□□ 2.98
CDCA4-202ENST00000392590 KDM5BQ9UGL1 1544 aa33.68■■■□□ 2.98
CDCA4-202ENST00000392590 ARHGAP35Q9NRY4 1499 aa33.61■■■□□ 2.97
CDCA4-202ENST00000392590 FAM69CQ0P6D2 419 aa33.61■■■□□ 2.97
CDCA4-202ENST00000392590 ASXL2Q76L83 1435 aa33.6■■■□□ 2.97
CDCA4-202ENST00000392590 ABCC10Q5T3U5 1492 aa33.59■■■□□ 2.97
CDCA4-202ENST00000392590 ARID3CA6NKF2 412 aa33.56■■■□□ 2.96
CDCA4-202ENST00000392590 ZCCHC11Q5TAX3 1644 aaKnown RBP33.55■■■□□ 2.96
CDCA4-202ENST00000392590 LOC105371045A0A1W2PR82 267 aa33.52■■■□□ 2.96
CDCA4-202ENST00000392590 RAPGEF6Q8TEU7 1601 aa33.51■■■□□ 2.96
CDCA4-202ENST00000392590 FMN1Q68DA7 1419 aa33.48■■■□□ 2.95
CDCA4-202ENST00000392590 ATP10BO94823 1461 aa33.48■■■□□ 2.95
CDCA4-202ENST00000392590 DIP2BQ9P265 1576 aa33.47■■■□□ 2.95
CDCA4-202ENST00000392590 CLIP1P30622 1438 aa33.47■■■□□ 2.95
CDCA4-202ENST00000392590 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.46■■■□□ 2.95
CDCA4-202ENST00000392590 HNRNPUL2Q1KMD3 747 aaKnown RBP33.46■■■□□ 2.95
CDCA4-202ENST00000392590 NUP153P49790 1475 aaKnown RBP33.44■■■□□ 2.94
CDCA4-202ENST00000392590 KIF13AQ9H1H9 1805 aa33.43■■■□□ 2.94
CDCA4-202ENST00000392590 WDR7Q9Y4E6 1490 aa33.41■■■□□ 2.94
CDCA4-202ENST00000392590 ATP1B4Q9UN42 357 aaPredicted RBP33.4■■■□□ 2.94
CDCA4-202ENST00000392590 KCNH8Q96L42 1107 aa33.38■■■□□ 2.93
CDCA4-202ENST00000392590 EPRSP07814 1512 aaKnown RBP33.38■■■□□ 2.93
CDCA4-202ENST00000392590 GLI2P10070 1586 aa33.33■■■□□ 2.93
CDCA4-202ENST00000392590 CEP162Q5TB80 1403 aa33.32■■■□□ 2.92
CDCA4-202ENST00000392590 PLEKHD1A6NEE1 506 aa33.28■■■□□ 2.92
CDCA4-202ENST00000392590 HECW1Q76N89 1606 aa33.23■■■□□ 2.91
CDCA4-202ENST00000392590 CASKIN1Q8WXD9 1431 aa33.22■■■□□ 2.91
CDCA4-202ENST00000392590 CDK13Q14004 1512 aaKnown RBP33.2■■■□□ 2.91
CDCA4-202ENST00000392590 CDK11AQ9UQ88 783 aaPredicted RBP33.17■■■□□ 2.9
CDCA4-202ENST00000392590 CD109Q6YHK3 1445 aa33.15■■■□□ 2.9
CDCA4-202ENST00000392590 TSPOAP1O95153 1857 aa33.15■■■□□ 2.9
CDCA4-202ENST00000392590 MAP3K4Q9Y6R4 1608 aa33.13■■■□□ 2.89
CDCA4-202ENST00000392590 PCF11O94913 1555 aaKnown RBP33.13■■■□□ 2.89
CDCA4-202ENST00000392590 FYCO1Q9BQS8 1478 aa33.11■■■□□ 2.89
CDCA4-202ENST00000392590 TEX14Q8IWB6 1497 aa33.06■■■□□ 2.88
CDCA4-202ENST00000392590 CCDC18Q5T9S5 1454 aa33.06■■■□□ 2.88
CDCA4-202ENST00000392590 CFAP43Q8NDM7 1665 aa33.04■■■□□ 2.88
CDCA4-202ENST00000392590 PPRC1Q5VV67 1664 aaKnown RBP33.04■■■□□ 2.88
CDCA4-202ENST00000392590 MAGI3Q5TCQ9 1506 aa33.03■■■□□ 2.88
CDCA4-202ENST00000392590 ABCA9Q8IUA7 1624 aa33.01■■■□□ 2.87
CDCA4-202ENST00000392590 LRRIQ1Q96JM4 1722 aa32.98■■■□□ 2.87
CDCA4-202ENST00000392590 TROQ12816 1431 aaPredicted RBP32.97■■■□□ 2.87
CDCA4-202ENST00000392590 KDM6BO15054 1643 aa32.94■■■□□ 2.86
CDCA4-202ENST00000392590 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.93■■■□□ 2.866e-6■■■■■ 38.2
CDCA4-202ENST00000392590 VPS8Q8N3P4 1428 aa32.91■■■□□ 2.86
CDCA4-202ENST00000392590 COL17A1Q9UMD9 1497 aaPredicted RBP32.86■■■□□ 2.85
CDCA4-202ENST00000392590 TTC37Q6PGP7 1564 aa32.85■■■□□ 2.85
CDCA4-202ENST00000392590 PHLDB1Q86UU1 1377 aa32.83■■■□□ 2.85
CDCA4-202ENST00000392590 KIF14Q15058 1648 aa32.83■■■□□ 2.85
CDCA4-202ENST00000392590 NEO1Q92859 1461 aa32.8■■■□□ 2.84
CDCA4-202ENST00000392590 PLCH2O75038 1416 aa32.79■■■□□ 2.84
CDCA4-202ENST00000392590 MTUS2Q5JR59 1369 aa32.79■■■□□ 2.84
CDCA4-202ENST00000392590 FANCAO15360 1455 aa32.75■■■□□ 2.83
CDCA4-202ENST00000392590 ARAP3Q8WWN8 1544 aa32.74■■■□□ 2.83
CDCA4-202ENST00000392590 EFCAB2Q5VUJ9 269 aa32.73■■■□□ 2.83
CDCA4-202ENST00000392590 AKNAQ7Z591 1439 aa32.72■■■□□ 2.83
CDCA4-202ENST00000392590 RAPGEF3O95398 923 aa32.67■■■□□ 2.82
CDCA4-202ENST00000392590 TIAM1Q13009 1591 aa32.64■■■□□ 2.82
CDCA4-202ENST00000392590 CFAP74Q9C0B2 1584 aa32.64■■■□□ 2.82
CDCA4-202ENST00000392590 MYO5CQ9NQX4 1742 aa32.64■■■□□ 2.82
CDCA4-202ENST00000392590 APLP2Q06481 763 aa32.64■■■□□ 2.82
CDCA4-202ENST00000392590 EHBP1L1Q8N3D4 1523 aa32.63■■■□□ 2.81
CDCA4-202ENST00000392590 ARHGAP5Q13017 1502 aa32.62■■■□□ 2.81
CDCA4-202ENST00000392590 DENND4BO75064 1496 aaPredicted RBP32.6■■■□□ 2.81
CDCA4-202ENST00000392590 MAP3K1Q13233 1512 aa32.59■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms