RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 PRG4Q92954 1404 aaPredicted RBP18.83■□□□□ 0.6
TRAF3IP2-208ENST00000392556 HRCP23327 699 aa18.82■□□□□ 0.6
TRAF3IP2-208ENST00000392556 CUL7Q14999 1698 aa18.8■□□□□ 0.6
TRAF3IP2-208ENST00000392556 RUSC2Q8N2Y8 1516 aa18.8■□□□□ 0.6
TRAF3IP2-208ENST00000392556 IGF1RP08069 1367 aa18.79■□□□□ 0.6
TRAF3IP2-208ENST00000392556 KIAA0586Q9BVV6 1533 aa18.77■□□□□ 0.6
TRAF3IP2-208ENST00000392556 NPM1P06748 294 aaKnown RBP eCLIP18.69■□□□□ 0.58
TRAF3IP2-208ENST00000392556 CARMIL1Q5VZK9 1371 aa18.68■□□□□ 0.58
TRAF3IP2-208ENST00000392556 MAPKBP1O60336 1514 aa18.65■□□□□ 0.58
TRAF3IP2-208ENST00000392556 CARMIL2Q6F5E8 1435 aa18.61■□□□□ 0.57
TRAF3IP2-208ENST00000392556 ABCC10Q5T3U5 1492 aa18.61■□□□□ 0.57
TRAF3IP2-208ENST00000392556 KIF13AQ9H1H9 1805 aa18.57■□□□□ 0.56
TRAF3IP2-208ENST00000392556 ADCY10Q96PN6 1610 aa18.57■□□□□ 0.56
TRAF3IP2-208ENST00000392556 PTPRGP23470 1445 aa18.57■□□□□ 0.56
TRAF3IP2-208ENST00000392556 TNIKQ9UKE5 1360 aa18.56■□□□□ 0.56
TRAF3IP2-208ENST00000392556 IQGAP2Q13576 1575 aa18.55■□□□□ 0.56
TRAF3IP2-208ENST00000392556 FAM69CQ0P6D2 419 aa18.54■□□□□ 0.56
TRAF3IP2-208ENST00000392556 RAPGEF2Q9Y4G8 1499 aa18.53■□□□□ 0.56
TRAF3IP2-208ENST00000392556 AEBP2Q6ZN18 517 aaPredicted RBP18.52■□□□□ 0.56
TRAF3IP2-208ENST00000392556 DIP2BQ9P265 1576 aa18.51■□□□□ 0.55
TRAF3IP2-208ENST00000392556 UHRF1BP1LA0JNW5 1464 aa18.5■□□□□ 0.55
TRAF3IP2-208ENST00000392556 ABCC2Q92887 1545 aa18.48■□□□□ 0.55
TRAF3IP2-208ENST00000392556 UGGT2Q9NYU1 1516 aa18.47■□□□□ 0.55
TRAF3IP2-208ENST00000392556 PLB1Q6P1J6 1458 aa18.44■□□□□ 0.54
TRAF3IP2-208ENST00000392556 UACAQ9BZF9 1416 aa18.44■□□□□ 0.54
TRAF3IP2-208ENST00000392556 DISP1Q96F81 1524 aa18.43■□□□□ 0.54
TRAF3IP2-208ENST00000392556 GLI2P10070 1586 aa18.39■□□□□ 0.54
TRAF3IP2-208ENST00000392556 GOLGA3Q08378 1498 aa18.37■□□□□ 0.53
TRAF3IP2-208ENST00000392556 ASXL2Q76L83 1435 aa18.37■□□□□ 0.53
TRAF3IP2-208ENST00000392556 KIAA0556O60303 1618 aa18.37■□□□□ 0.53
TRAF3IP2-208ENST00000392556 KDM5BQ9UGL1 1544 aa18.36■□□□□ 0.53
TRAF3IP2-208ENST00000392556 KDM6BO15054 1643 aa18.35■□□□□ 0.53
TRAF3IP2-208ENST00000392556 PRXQ9BXM0 1461 aa18.33■□□□□ 0.53
TRAF3IP2-208ENST00000392556 TTBK1Q5TCY1 1321 aaPredicted RBP18.33■□□□□ 0.52
TRAF3IP2-208ENST00000392556 CTTNBP2Q8WZ74 1663 aa18.32■□□□□ 0.52
TRAF3IP2-208ENST00000392556 FAM9AQ8IZU1 332 aaPredicted RBP18.3■□□□□ 0.52
TRAF3IP2-208ENST00000392556 EPRSP07814 1512 aaKnown RBP18.28■□□□□ 0.52
TRAF3IP2-208ENST00000392556 TEX14Q8IWB6 1497 aa18.27■□□□□ 0.51
TRAF3IP2-208ENST00000392556 TSPOAP1O95153 1857 aa18.25■□□□□ 0.51
TRAF3IP2-208ENST00000392556 ZCCHC11Q5TAX3 1644 aaKnown RBP18.25■□□□□ 0.51
TRAF3IP2-208ENST00000392556 WDR7Q9Y4E6 1490 aa18.23■□□□□ 0.51
TRAF3IP2-208ENST00000392556 EEA1Q15075 1411 aa18.23■□□□□ 0.51
TRAF3IP2-208ENST00000392556 MAP3K4Q9Y6R4 1608 aa18.22■□□□□ 0.51
TRAF3IP2-208ENST00000392556 ABCA8O94911 1581 aa18.21■□□□□ 0.51
TRAF3IP2-208ENST00000392556 PPRC1Q5VV67 1664 aaKnown RBP18.21■□□□□ 0.51
TRAF3IP2-208ENST00000392556 CSRNP3Q8WYN3 585 aa18.19■□□□□ 0.5
TRAF3IP2-208ENST00000392556 MAGI3Q5TCQ9 1506 aa18.14■□□□□ 0.5
TRAF3IP2-208ENST00000392556 CFAP43Q8NDM7 1665 aa18.13■□□□□ 0.49
TRAF3IP2-208ENST00000392556 KDM4FA0A1W2PPD8 638 aa18.11■□□□□ 0.49
TRAF3IP2-208ENST00000392556 PPARGC1BQ86YN6 1023 aaKnown RBP18.11■□□□□ 0.49
TRAF3IP2-208ENST00000392556 CD109Q6YHK3 1445 aa18.11■□□□□ 0.49
TRAF3IP2-208ENST00000392556 SAMD9Q5K651 1589 aa18.09■□□□□ 0.49
TRAF3IP2-208ENST00000392556 COL17A1Q9UMD9 1497 aaPredicted RBP18.08■□□□□ 0.48
TRAF3IP2-208ENST00000392556 PHLDB1Q86UU1 1377 aa18.07■□□□□ 0.48
TRAF3IP2-208ENST00000392556 SCAF1Q9H7N4 1312 aaKnown RBP18.05■□□□□ 0.48
TRAF3IP2-208ENST00000392556 ATP10BO94823 1461 aa18.04■□□□□ 0.48
TRAF3IP2-208ENST00000392556 KCNH8Q96L42 1107 aa18.04■□□□□ 0.48
TRAF3IP2-208ENST00000392556 ADGRL1O94910 1474 aa18.01■□□□□ 0.47
TRAF3IP2-208ENST00000392556 RAPGEF6Q8TEU7 1601 aa18■□□□□ 0.47
TRAF3IP2-208ENST00000392556 ARAP3Q8WWN8 1544 aa18■□□□□ 0.47
TRAF3IP2-208ENST00000392556 P3H3Q8IVL6 736 aa17.99■□□□□ 0.47
TRAF3IP2-208ENST00000392556 KIF21BO75037 1637 aa17.98■□□□□ 0.47
TRAF3IP2-208ENST00000392556 EFCAB5A4FU69 1503 aa17.98■□□□□ 0.47
TRAF3IP2-208ENST00000392556 ABCA9Q8IUA7 1624 aa17.98■□□□□ 0.47
TRAF3IP2-208ENST00000392556 NEO1Q92859 1461 aa17.95■□□□□ 0.46
TRAF3IP2-208ENST00000392556 NUP153P49790 1475 aaKnown RBP17.93■□□□□ 0.46
TRAF3IP2-208ENST00000392556 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.91■□□□□ 0.46
TRAF3IP2-208ENST00000392556 HNRNPUL2Q1KMD3 747 aaKnown RBP17.91■□□□□ 0.46
TRAF3IP2-208ENST00000392556 FHOD3Q2V2M9 1422 aa17.9■□□□□ 0.46
TRAF3IP2-208ENST00000392556 PLEKHD1A6NEE1 506 aa17.9■□□□□ 0.46
TRAF3IP2-208ENST00000392556 PCGF6Q9BYE7 350 aa17.9■□□□□ 0.46
TRAF3IP2-208ENST00000392556 ARID3CA6NKF2 412 aa17.89■□□□□ 0.45
TRAF3IP2-208ENST00000392556 FMN1Q68DA7 1419 aa17.83■□□□□ 0.44
TRAF3IP2-208ENST00000392556 CFAP74Q9C0B2 1584 aa17.82■□□□□ 0.44
TRAF3IP2-208ENST00000392556 RANGAP1P46060 587 aaPredicted RBP17.81■□□□□ 0.44
TRAF3IP2-208ENST00000392556 UBTFP17480 764 aaKnown RBP17.79■□□□□ 0.44
TRAF3IP2-208ENST00000392556 CHIC1Q5VXU3 224 aa17.79■□□□□ 0.44
TRAF3IP2-208ENST00000392556 DENND4BO75064 1496 aaPredicted RBP17.78■□□□□ 0.44
TRAF3IP2-208ENST00000392556 CDK11AQ9UQ88 783 aaPredicted RBP17.77■□□□□ 0.43
TRAF3IP2-208ENST00000392556 RAPGEF3O95398 923 aa17.76■□□□□ 0.43
TRAF3IP2-208ENST00000392556 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.76■□□□□ 0.43
TRAF3IP2-208ENST00000392556 FANCAO15360 1455 aa17.76■□□□□ 0.43
TRAF3IP2-208ENST00000392556 AKNAQ7Z591 1439 aa17.76■□□□□ 0.43
TRAF3IP2-208ENST00000392556 HECW1Q76N89 1606 aa17.75■□□□□ 0.43
TRAF3IP2-208ENST00000392556 FRMPD1Q5SYB0 1578 aa17.74■□□□□ 0.43
TRAF3IP2-208ENST00000392556 HECW2Q9P2P5 1572 aa17.73■□□□□ 0.43
TRAF3IP2-208ENST00000392556 MAGI2Q86UL8 1455 aa17.73■□□□□ 0.43
TRAF3IP2-208ENST00000392556 ARHGAP35Q9NRY4 1499 aa17.73■□□□□ 0.43
TRAF3IP2-208ENST00000392556 ARHGEF40Q8TER5 1519 aa17.71■□□□□ 0.43
TRAF3IP2-208ENST00000392556 PLCH2O75038 1416 aa17.71■□□□□ 0.43
TRAF3IP2-208ENST00000392556 ADAMTSL3P82987 1691 aa17.71■□□□□ 0.43
TRAF3IP2-208ENST00000392556 ZMYM4Q5VZL5 1548 aa17.71■□□□□ 0.43
TRAF3IP2-208ENST00000392556 CDK13Q14004 1512 aaKnown RBP17.69■□□□□ 0.42
TRAF3IP2-208ENST00000392556 TTC37Q6PGP7 1564 aa17.69■□□□□ 0.42
TRAF3IP2-208ENST00000392556 RICTORQ6R327 1708 aa17.69■□□□□ 0.42
TRAF3IP2-208ENST00000392556 POGZQ7Z3K3 1410 aa17.68■□□□□ 0.42
TRAF3IP2-208ENST00000392556 PTPRMP28827 1452 aa17.67■□□□□ 0.42
TRAF3IP2-208ENST00000392556 BCORL1Q5H9F3 1711 aa17.67■□□□□ 0.42
TRAF3IP2-208ENST00000392556 CLIP1P30622 1438 aa17.67■□□□□ 0.42
TRAF3IP2-208ENST00000392556 EFCAB2Q5VUJ9 269 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms