RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 LRRC9Q6ZRR7 1453 aa18.17■□□□□ 0.5
RFC5-201ENST00000392542 WDR97A6NE52 1622 aa18.17■□□□□ 0.5
RFC5-201ENST00000392542 CENPBP07199 599 aaPredicted RBP18.17■□□□□ 0.5
RFC5-201ENST00000392542 NEUROD1Q13562 356 aa18.17■□□□□ 0.5
RFC5-201ENST00000392542 PCF11O94913 1555 aaKnown RBP18.16■□□□□ 0.5
RFC5-201ENST00000392542 EFCAB5A4FU69 1503 aa18.15■□□□□ 0.5
RFC5-201ENST00000392542 CTTNBP2Q8WZ74 1663 aa18.15■□□□□ 0.5
RFC5-201ENST00000392542 URB2Q14146 1524 aaKnown RBP18.14■□□□□ 0.49
RFC5-201ENST00000392542 FYCO1Q9BQS8 1478 aa18.09■□□□□ 0.49
RFC5-201ENST00000392542 FHOD3Q2V2M9 1422 aa18.09■□□□□ 0.49
RFC5-201ENST00000392542 ABCA5Q8WWZ7 1642 aa18.08■□□□□ 0.49
RFC5-201ENST00000392542 AQRO60306 1485 aaKnown RBP eCLIP18.08■□□□□ 0.482e-6■■■□□ 15.6
RFC5-201ENST00000392542 PHLDB1Q86UU1 1377 aa18.07■□□□□ 0.48
RFC5-201ENST00000392542 P3H3Q8IVL6 736 aa18.07■□□□□ 0.48
RFC5-201ENST00000392542 ITGAEP38570 1179 aa18.06■□□□□ 0.48
RFC5-201ENST00000392542 CASKIN1Q8WXD9 1431 aa18.06■□□□□ 0.48
RFC5-201ENST00000392542 PDS5BQ9NTI5 1447 aa18.06■□□□□ 0.48
RFC5-201ENST00000392542 MIER1Q8N108 512 aa18.04■□□□□ 0.48
RFC5-201ENST00000392542 RAB3GAP2Q9H2M9 1393 aa18.04■□□□□ 0.48
RFC5-201ENST00000392542 KIF21AQ7Z4S6 1674 aa18.01■□□□□ 0.47
RFC5-201ENST00000392542 GAPVD1Q14C86 1478 aa18.01■□□□□ 0.47
RFC5-201ENST00000392542 SETD5Q9C0A6 1442 aa18■□□□□ 0.47
RFC5-201ENST00000392542 FMN1Q68DA7 1419 aa18■□□□□ 0.47
RFC5-201ENST00000392542 TDRD9Q8NDG6 1382 aaKnown RBP17.99■□□□□ 0.47
RFC5-201ENST00000392542 SAMD9Q5K651 1589 aa17.99■□□□□ 0.47
RFC5-201ENST00000392542 ATP1B4Q9UN42 357 aaPredicted RBP17.99■□□□□ 0.47
RFC5-201ENST00000392542 MAPKBP1O60336 1514 aa17.98■□□□□ 0.47
RFC5-201ENST00000392542 SNAPC4Q5SXM2 1469 aa17.97■□□□□ 0.47
RFC5-201ENST00000392542 GTF3C3Q9Y5Q9 886 aa17.96■□□□□ 0.47
RFC5-201ENST00000392542 FAM50AQ14320 339 aaKnown RBP17.95■□□□□ 0.46
RFC5-201ENST00000392542 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.95■□□□□ 0.46
RFC5-201ENST00000392542 TARBP1Q13395 1621 aaKnown RBP17.94■□□□□ 0.46
RFC5-201ENST00000392542 DNAJC5BQ9UF47 199 aa17.93■□□□□ 0.46
RFC5-201ENST00000392542 YTHDC1Q96MU7 727 aaKnown RBP17.92■□□□□ 0.46
RFC5-201ENST00000392542 LRRIQ1Q96JM4 1722 aa17.89■□□□□ 0.45
RFC5-201ENST00000392542 THOC2Q8NI27 1593 aaKnown RBP17.89■□□□□ 0.45
RFC5-201ENST00000392542 GRIN2BQ13224 1484 aa17.87■□□□□ 0.45
RFC5-201ENST00000392542 FGD6Q6ZV73 1430 aa17.87■□□□□ 0.45
RFC5-201ENST00000392542 PBRM1Q86U86 1689 aa17.87■□□□□ 0.45
RFC5-201ENST00000392542 PELP1Q8IZL8 1130 aaKnown RBP17.86■□□□□ 0.45
RFC5-201ENST00000392542 MTUS2Q5JR59 1369 aa17.85■□□□□ 0.45
RFC5-201ENST00000392542 EHBP1L1Q8N3D4 1523 aa17.81■□□□□ 0.44
RFC5-201ENST00000392542 SUPT6HQ7KZ85 1726 aaKnown RBP17.81■□□□□ 0.44
RFC5-201ENST00000392542 ADAMTS12P58397 1594 aa17.8■□□□□ 0.44
RFC5-201ENST00000392542 NCOA2Q15596 1464 aa17.8■□□□□ 0.44
RFC5-201ENST00000392542 MRC2Q9UBG0 1479 aa17.8■□□□□ 0.44
RFC5-201ENST00000392542 MYOM3Q5VTT5 1437 aa17.78■□□□□ 0.44
RFC5-201ENST00000392542 CCDC18Q5T9S5 1454 aa17.77■□□□□ 0.43
RFC5-201ENST00000392542 IQGAP2Q13576 1575 aa17.77■□□□□ 0.43
RFC5-201ENST00000392542 SIN3AQ96ST3 1273 aa17.76■□□□□ 0.43
RFC5-201ENST00000392542 TIMELESSQ9UNS1 1208 aa17.76■□□□□ 0.43
RFC5-201ENST00000392542 UGGT2Q9NYU1 1516 aa17.75■□□□□ 0.43
RFC5-201ENST00000392542 HECW1Q76N89 1606 aa17.74■□□□□ 0.43
RFC5-201ENST00000392542 ARHGEF11O15085 1522 aa17.74■□□□□ 0.43
RFC5-201ENST00000392542 HFM1A2PYH4 1435 aa17.74■□□□□ 0.43
RFC5-201ENST00000392542 PTPRKQ15262 1439 aa17.74■□□□□ 0.43
RFC5-201ENST00000392542 PTPN23Q9H3S7 1636 aa17.73■□□□□ 0.43
RFC5-201ENST00000392542 MAGI3Q5TCQ9 1506 aa17.72■□□□□ 0.43
RFC5-201ENST00000392542 IFT140Q96RY7 1462 aa17.69■□□□□ 0.42
RFC5-201ENST00000392542 UACAQ9BZF9 1416 aa17.69■□□□□ 0.42
RFC5-201ENST00000392542 NAIPQ13075 1403 aa17.67■□□□□ 0.42
RFC5-201ENST00000392542 WDR62O43379 1518 aa17.67■□□□□ 0.42
RFC5-201ENST00000392542 EPRSP07814 1512 aaKnown RBP17.67■□□□□ 0.42
RFC5-201ENST00000392542 TCOF1Q13428 1488 aaKnown RBP17.67■□□□□ 0.42
RFC5-201ENST00000392542 PPP1R15AO75807 674 aaPredicted RBP17.64■□□□□ 0.42
RFC5-201ENST00000392542 ZNF608Q9ULD9 1512 aaPredicted RBP17.64■□□□□ 0.41
RFC5-201ENST00000392542 CDK13Q14004 1512 aaKnown RBP17.61■□□□□ 0.41
RFC5-201ENST00000392542 GCC2Q8IWJ2 1684 aa17.61■□□□□ 0.41
RFC5-201ENST00000392542 KIAA0586Q9BVV6 1533 aa17.59■□□□□ 0.41
RFC5-201ENST00000392542 TONSLQ96HA7 1378 aa17.59■□□□□ 0.41
RFC5-201ENST00000392542 MIA2Q96PC5 1412 aa17.59■□□□□ 0.41
RFC5-201ENST00000392542 KIAA0556O60303 1618 aa17.59■□□□□ 0.41
RFC5-201ENST00000392542 AKNAQ7Z591 1439 aa17.58■□□□□ 0.4
RFC5-201ENST00000392542 EIF4G3O43432 1585 aaKnown RBP17.57■□□□□ 0.4
RFC5-201ENST00000392542 DISP1Q96F81 1524 aa17.56■□□□□ 0.4
RFC5-201ENST00000392542 GRIN2AQ12879 1464 aa17.55■□□□□ 0.4
RFC5-201ENST00000392542 DDX10Q13206 875 aaKnown RBP17.53■□□□□ 0.4
RFC5-201ENST00000392542 RRP7BPQ9NSQ0 103 aa17.52■□□□□ 0.4
RFC5-201ENST00000392542 RAPGEF6Q8TEU7 1601 aa17.51■□□□□ 0.39
RFC5-201ENST00000392542 CHIC2Q9UKJ5 165 aa17.5■□□□□ 0.39
RFC5-201ENST00000392542 KDM5BQ9UGL1 1544 aa17.5■□□□□ 0.39
RFC5-201ENST00000392542 KDM6BO15054 1643 aa17.5■□□□□ 0.39
RFC5-201ENST00000392542 NUP153P49790 1475 aaKnown RBP17.49■□□□□ 0.39
RFC5-201ENST00000392542 ARID3CA6NKF2 412 aa17.48■□□□□ 0.39
RFC5-201ENST00000392542 MAGI1Q96QZ7 1491 aaPredicted RBP17.48■□□□□ 0.39
RFC5-201ENST00000392542 DENND4BO75064 1496 aaPredicted RBP17.47■□□□□ 0.39
RFC5-201ENST00000392542 KCNH8Q96L42 1107 aa17.47■□□□□ 0.39
RFC5-201ENST00000392542 HIRIP3Q9BW71 556 aaPredicted RBP17.47■□□□□ 0.39
RFC5-201ENST00000392542 ERCC6Q03468 1493 aa17.47■□□□□ 0.39
RFC5-201ENST00000392542 DNMT1P26358 1616 aaKnown RBP17.45■□□□□ 0.38
RFC5-201ENST00000392542 DAPK1P53355 1430 aa17.44■□□□□ 0.38
RFC5-201ENST00000392542 ROCK1Q13464 1354 aa17.43■□□□□ 0.38
RFC5-201ENST00000392542 CEP170Q5SW79 1584 aa17.43■□□□□ 0.38
RFC5-201ENST00000392542 SYNJ2O15056 1496 aa17.43■□□□□ 0.38
RFC5-201ENST00000392542 TRIM52Q96A61 297 aa17.43■□□□□ 0.38
RFC5-201ENST00000392542 CDK11AQ9UQ88 783 aaPredicted RBP17.41■□□□□ 0.38
RFC5-201ENST00000392542 ABCC5O15440 1437 aa17.41■□□□□ 0.38
RFC5-201ENST00000392542 CCER2I3L3R5 266 aa17.4■□□□□ 0.38
RFC5-201ENST00000392542 MPHOSPH9Q99550 1183 aa17.39■□□□□ 0.37
RFC5-201ENST00000392542 TROQ12816 1431 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms