RNA–Protein interactions for RNA: ENST00000392495.7

SPPL3-202, Transcript of signal peptide peptidase like 3, humanhuman

TSL 2

Gene SPPL3, Length 2,265 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-202ENST00000392495 LRRC9Q6ZRR7 1453 aa17.29■□□□□ 0.36
SPPL3-202ENST00000392495 PCF11O94913 1555 aaKnown RBP17.27■□□□□ 0.35
SPPL3-202ENST00000392495 ITGAEP38570 1179 aa17.27■□□□□ 0.35
SPPL3-202ENST00000392495 CFAP43Q8NDM7 1665 aa17.25■□□□□ 0.35
SPPL3-202ENST00000392495 P3H3Q8IVL6 736 aa17.25■□□□□ 0.35
SPPL3-202ENST00000392495 FHAD1B1AJZ9 1412 aa17.25■□□□□ 0.35
SPPL3-202ENST00000392495 PHLDB1Q86UU1 1377 aa17.25■□□□□ 0.35
SPPL3-202ENST00000392495 YTHDC1Q96MU7 727 aaKnown RBP17.23■□□□□ 0.35
SPPL3-202ENST00000392495 RAB3GAP2Q9H2M9 1393 aa17.23■□□□□ 0.35
SPPL3-202ENST00000392495 FHOD3Q2V2M9 1422 aa17.22■□□□□ 0.35
SPPL3-202ENST00000392495 CUL7Q14999 1698 aa17.22■□□□□ 0.35
SPPL3-202ENST00000392495 URB2Q14146 1524 aaKnown RBP17.21■□□□□ 0.35
SPPL3-202ENST00000392495 WDR97A6NE52 1622 aa17.21■□□□□ 0.35
SPPL3-202ENST00000392495 CTTNBP2Q8WZ74 1663 aa17.2■□□□□ 0.34
SPPL3-202ENST00000392495 LAMC3Q9Y6N6 1575 aa17.19■□□□□ 0.34
SPPL3-202ENST00000392495 MAPKBP1O60336 1514 aa17.19■□□□□ 0.34
SPPL3-202ENST00000392495 EFCAB5A4FU69 1503 aa17.18■□□□□ 0.34
SPPL3-202ENST00000392495 FYCO1Q9BQS8 1478 aa17.16■□□□□ 0.34
SPPL3-202ENST00000392495 CASKIN1Q8WXD9 1431 aa17.15■□□□□ 0.34
SPPL3-202ENST00000392495 SETD5Q9C0A6 1442 aa17.15■□□□□ 0.34
SPPL3-202ENST00000392495 DNAJC5BQ9UF47 199 aa17.14■□□□□ 0.33
SPPL3-202ENST00000392495 AQRO60306 1485 aaKnown RBP eCLIP17.13■□□□□ 0.33
SPPL3-202ENST00000392495 ATP1B4Q9UN42 357 aaPredicted RBP17.13■□□□□ 0.33
SPPL3-202ENST00000392495 ABCA5Q8WWZ7 1642 aa17.13■□□□□ 0.33
SPPL3-202ENST00000392495 PELP1Q8IZL8 1130 aaKnown RBP17.12■□□□□ 0.33
SPPL3-202ENST00000392495 FAM50AQ14320 339 aaKnown RBP17.12■□□□□ 0.33
SPPL3-202ENST00000392495 TDRD9Q8NDG6 1382 aaKnown RBP17.11■□□□□ 0.33
SPPL3-202ENST00000392495 SNAPC4Q5SXM2 1469 aa17.1■□□□□ 0.33
SPPL3-202ENST00000392495 GAPVD1Q14C86 1478 aa17.07■□□□□ 0.32
SPPL3-202ENST00000392495 KIF21AQ7Z4S6 1674 aa17.07■□□□□ 0.32
SPPL3-202ENST00000392495 SAMD9Q5K651 1589 aa17.07■□□□□ 0.32
SPPL3-202ENST00000392495 LRRIQ1Q96JM4 1722 aa17.07■□□□□ 0.32
SPPL3-202ENST00000392495 FMN1Q68DA7 1419 aa17.06■□□□□ 0.32
SPPL3-202ENST00000392495 PDS5BQ9NTI5 1447 aa17.05■□□□□ 0.32
SPPL3-202ENST00000392495 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.04■□□□□ 0.32
SPPL3-202ENST00000392495 SIN3AQ96ST3 1273 aa17.01■□□□□ 0.31
SPPL3-202ENST00000392495 TARBP1Q13395 1621 aaKnown RBP17.01■□□□□ 0.31
SPPL3-202ENST00000392495 FGD6Q6ZV73 1430 aa17■□□□□ 0.31
SPPL3-202ENST00000392495 GRIN2BQ13224 1484 aa16.98■□□□□ 0.31
SPPL3-202ENST00000392495 PTPRKQ15262 1439 aa16.96■□□□□ 0.31
SPPL3-202ENST00000392495 MTUS2Q5JR59 1369 aa16.96■□□□□ 0.31
SPPL3-202ENST00000392495 NCOA2Q15596 1464 aa16.93■□□□□ 0.3
SPPL3-202ENST00000392495 THOC2Q8NI27 1593 aaKnown RBP16.92■□□□□ 0.3
SPPL3-202ENST00000392495 PBRM1Q86U86 1689 aa16.91■□□□□ 0.3
SPPL3-202ENST00000392495 MAGI3Q5TCQ9 1506 aa16.9■□□□□ 0.3
SPPL3-202ENST00000392495 MYOM3Q5VTT5 1437 aa16.9■□□□□ 0.3
SPPL3-202ENST00000392495 HFM1A2PYH4 1435 aa16.89■□□□□ 0.29
SPPL3-202ENST00000392495 SUPT6HQ7KZ85 1726 aaKnown RBP16.89■□□□□ 0.29
SPPL3-202ENST00000392495 TIMELESSQ9UNS1 1208 aa16.89■□□□□ 0.29
SPPL3-202ENST00000392495 CCDC18Q5T9S5 1454 aa16.89■□□□□ 0.29
SPPL3-202ENST00000392495 PTPN23Q9H3S7 1636 aa16.88■□□□□ 0.29
SPPL3-202ENST00000392495 EHBP1L1Q8N3D4 1523 aa16.88■□□□□ 0.29
SPPL3-202ENST00000392495 ARHGEF11O15085 1522 aa16.87■□□□□ 0.29
SPPL3-202ENST00000392495 UGGT2Q9NYU1 1516 aa16.86■□□□□ 0.29
SPPL3-202ENST00000392495 PPP1R15AO75807 674 aaPredicted RBP16.86■□□□□ 0.29
SPPL3-202ENST00000392495 NAIPQ13075 1403 aa16.85■□□□□ 0.29
SPPL3-202ENST00000392495 KCNH8Q96L42 1107 aa16.85■□□□□ 0.29
SPPL3-202ENST00000392495 ADAMTS12P58397 1594 aa16.85■□□□□ 0.29
SPPL3-202ENST00000392495 UACAQ9BZF9 1416 aa16.84■□□□□ 0.29
SPPL3-202ENST00000392495 IQGAP2Q13576 1575 aa16.84■□□□□ 0.29
SPPL3-202ENST00000392495 DDX10Q13206 875 aaKnown RBP16.81■□□□□ 0.28
SPPL3-202ENST00000392495 MRC2Q9UBG0 1479 aa16.81■□□□□ 0.28
SPPL3-202ENST00000392495 HECW1Q76N89 1606 aa16.8■□□□□ 0.28
SPPL3-202ENST00000392495 HIRIP3Q9BW71 556 aaPredicted RBP16.79■□□□□ 0.28
SPPL3-202ENST00000392495 EPRSP07814 1512 aaKnown RBP16.79■□□□□ 0.28
SPPL3-202ENST00000392495 TCOF1Q13428 1488 aaKnown RBP16.77■□□□□ 0.28
SPPL3-202ENST00000392495 CDK13Q14004 1512 aaKnown RBP16.77■□□□□ 0.27
SPPL3-202ENST00000392495 ZNF608Q9ULD9 1512 aaPredicted RBP16.76■□□□□ 0.27
SPPL3-202ENST00000392495 WDR62O43379 1518 aa16.76■□□□□ 0.27
SPPL3-202ENST00000392495 TONSLQ96HA7 1378 aa16.75■□□□□ 0.27
SPPL3-202ENST00000392495 KDM5BQ9UGL1 1544 aa16.74■□□□□ 0.27
SPPL3-202ENST00000392495 GCC2Q8IWJ2 1684 aa16.73■□□□□ 0.27
SPPL3-202ENST00000392495 DENND4BO75064 1496 aaPredicted RBP16.73■□□□□ 0.27
SPPL3-202ENST00000392495 RRP7BPQ9NSQ0 103 aa16.72■□□□□ 0.27
SPPL3-202ENST00000392495 KDM6BO15054 1643 aa16.72■□□□□ 0.27
SPPL3-202ENST00000392495 CHIC2Q9UKJ5 165 aa16.71■□□□□ 0.27
SPPL3-202ENST00000392495 SUPT16HQ9Y5B9 1047 aaKnown RBP16.71■□□□□ 0.27
SPPL3-202ENST00000392495 ARID3CA6NKF2 412 aa16.7■□□□□ 0.26
SPPL3-202ENST00000392495 IFT140Q96RY7 1462 aa16.7■□□□□ 0.26
SPPL3-202ENST00000392495 DISP1Q96F81 1524 aa16.69■□□□□ 0.26
SPPL3-202ENST00000392495 MIA2Q96PC5 1412 aa16.68■□□□□ 0.26
SPPL3-202ENST00000392495 AKNAQ7Z591 1439 aa16.67■□□□□ 0.26
SPPL3-202ENST00000392495 KIAA0556O60303 1618 aa16.67■□□□□ 0.26
SPPL3-202ENST00000392495 KIAA0586Q9BVV6 1533 aa16.66■□□□□ 0.26
SPPL3-202ENST00000392495 EIF4G3O43432 1585 aaKnown RBP16.63■□□□□ 0.25
SPPL3-202ENST00000392495 NUP153P49790 1475 aaKnown RBP16.63■□□□□ 0.25
SPPL3-202ENST00000392495 GRIN2AQ12879 1464 aa16.62■□□□□ 0.25
SPPL3-202ENST00000392495 RAPGEF6Q8TEU7 1601 aa16.6■□□□□ 0.25
SPPL3-202ENST00000392495 CCER2I3L3R5 266 aa16.59■□□□□ 0.25
SPPL3-202ENST00000392495 TRIM52Q96A61 297 aa16.59■□□□□ 0.25
SPPL3-202ENST00000392495 MPHOSPH9Q99550 1183 aa16.58■□□□□ 0.25
SPPL3-202ENST00000392495 DAPK1P53355 1430 aa16.58■□□□□ 0.25
SPPL3-202ENST00000392495 ANP32CO43423 234 aa16.58■□□□□ 0.24
SPPL3-202ENST00000392495 ZNF644Q9H582 1327 aaPredicted RBP16.58■□□□□ 0.24
SPPL3-202ENST00000392495 DNMT1P26358 1616 aaKnown RBP16.57■□□□□ 0.24
SPPL3-202ENST00000392495 ABCC5O15440 1437 aa16.57■□□□□ 0.24
SPPL3-202ENST00000392495 FOXD1Q16676 465 aa16.56■□□□□ 0.24
SPPL3-202ENST00000392495 ROCK1Q13464 1354 aa16.55■□□□□ 0.24
SPPL3-202ENST00000392495 CEP170Q5SW79 1584 aa16.54■□□□□ 0.24
SPPL3-202ENST00000392495 HSPA5P11021 654 aaKnown RBP16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms