RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 CTTNBP2Q8WZ74 1663 aa41.78■■■■■ 4.28
HOMER3-202ENST00000392351 IQGAP2Q13576 1575 aa41.7■■■■■ 4.27
HOMER3-202ENST00000392351 GOLGA3Q08378 1498 aa41.69■■■■■ 4.26
HOMER3-202ENST00000392351 EHMT2Q96KQ7 1210 aa41.69■■■■■ 4.26
HOMER3-202ENST00000392351 SHROOM2Q13796 1616 aa41.69■■■■■ 4.26
HOMER3-202ENST00000392351 JPH4Q96JJ6 628 aa41.59■■■■■ 4.25
HOMER3-202ENST00000392351 ARHGEF11O15085 1522 aa41.58■■■■■ 4.25
HOMER3-202ENST00000392351 RIMBP3CA6NJZ7 1639 aa41.55■■■■■ 4.24
HOMER3-202ENST00000392351 RIMBP3BA6NNM3 1639 aa41.55■■■■■ 4.24
HOMER3-202ENST00000392351 RIMBP3Q9UFD9 1639 aa41.55■■■■■ 4.24
HOMER3-202ENST00000392351 UBTFP17480 764 aaKnown RBP41.52■■■■■ 4.24
HOMER3-202ENST00000392351 PRG4Q92954 1404 aaPredicted RBP41.5■■■■■ 4.23
HOMER3-202ENST00000392351 ERCC6L2Q5T890 1561 aa41.48■■■■■ 4.23
HOMER3-202ENST00000392351 UGGT2Q9NYU1 1516 aa41.44■■■■■ 4.22
HOMER3-202ENST00000392351 DISP1Q96F81 1524 aa41.33■■■■■ 4.21
HOMER3-202ENST00000392351 CARMIL2Q6F5E8 1435 aa41.32■■■■■ 4.21
HOMER3-202ENST00000392351 KIAA0556O60303 1618 aa41.29■■■■■ 4.2
HOMER3-202ENST00000392351 ARAP1Q96P48 1450 aa41.29■■■■■ 4.2
HOMER3-202ENST00000392351 RANGAP1P46060 587 aaPredicted RBP41.27■■■■■ 4.2
HOMER3-202ENST00000392351 LOC105371045A0A1W2PR82 267 aa41.25■■■■■ 4.19
HOMER3-202ENST00000392351 TNIKQ9UKE5 1360 aa41.23■■■■■ 4.19
HOMER3-202ENST00000392351 SAMD9Q5K651 1589 aa41.21■■■■■ 4.19
HOMER3-202ENST00000392351 CYB5RLQ6IPT4 315 aa41.13■■■■■ 4.18
HOMER3-202ENST00000392351 EFCAB5A4FU69 1503 aa41.12■■■■■ 4.17
HOMER3-202ENST00000392351 P3H3Q8IVL6 736 aa41.08■■■■■ 4.17
HOMER3-202ENST00000392351 TTBK1Q5TCY1 1321 aaPredicted RBP41.07■■■■■ 4.16
HOMER3-202ENST00000392351 PTPRGP23470 1445 aa41.06■■■■■ 4.16
HOMER3-202ENST00000392351 ARHGAP35Q9NRY4 1499 aa41.01■■■■■ 4.15
HOMER3-202ENST00000392351 FHOD3Q2V2M9 1422 aa40.98■■■■■ 4.15
HOMER3-202ENST00000392351 CLIP1P30622 1438 aa40.96■■■■■ 4.15
HOMER3-202ENST00000392351 CEP162Q5TB80 1403 aa40.93■■■■■ 4.14
HOMER3-202ENST00000392351 ADCY10Q96PN6 1610 aa40.83■■■■■ 4.13
HOMER3-202ENST00000392351 UACAQ9BZF9 1416 aa40.81■■■■■ 4.12
HOMER3-202ENST00000392351 PLB1Q6P1J6 1458 aa40.8■■■■■ 4.12
HOMER3-202ENST00000392351 ABCA8O94911 1581 aa40.77■■■■■ 4.12
HOMER3-202ENST00000392351 ABCC2Q92887 1545 aa40.76■■■■■ 4.12
HOMER3-202ENST00000392351 UHRF1BP1LA0JNW5 1464 aa40.73■■■■■ 4.11
HOMER3-202ENST00000392351 RAPGEF6Q8TEU7 1601 aa40.71■■■■■ 4.11
HOMER3-202ENST00000392351 FMN1Q68DA7 1419 aa40.71■■■■■ 4.11
HOMER3-202ENST00000392351 NPM1P06748 294 aaKnown RBP eCLIP40.56■■■■■ 4.08
HOMER3-202ENST00000392351 KDM5BQ9UGL1 1544 aa40.55■■■■■ 4.08
HOMER3-202ENST00000392351 ZCCHC11Q5TAX3 1644 aaKnown RBP40.54■■■■■ 4.08
HOMER3-202ENST00000392351 PCF11O94913 1555 aaKnown RBP40.53■■■■■ 4.08
HOMER3-202ENST00000392351 NUP153P49790 1475 aaKnown RBP40.53■■■■■ 4.08
HOMER3-202ENST00000392351 HECW1Q76N89 1606 aa40.51■■■■■ 4.08
HOMER3-202ENST00000392351 ARID3CA6NKF2 412 aa40.48■■■■■ 4.07
HOMER3-202ENST00000392351 CASKIN1Q8WXD9 1431 aa40.46■■■■■ 4.07
HOMER3-202ENST00000392351 ATP1B4Q9UN42 357 aaPredicted RBP40.44■■■■■ 4.06
HOMER3-202ENST00000392351 FYCO1Q9BQS8 1478 aa40.43■■■■■ 4.06
HOMER3-202ENST00000392351 MAPKBP1O60336 1514 aa40.42■■■■■ 4.06
HOMER3-202ENST00000392351 ATP10BO94823 1461 aa40.42■■■■■ 4.06
HOMER3-202ENST00000392351 LRRIQ1Q96JM4 1722 aa40.39■■■■■ 4.06
HOMER3-202ENST00000392351 VPS8Q8N3P4 1428 aa40.39■■■■■ 4.06
HOMER3-202ENST00000392351 EPRSP07814 1512 aaKnown RBP40.34■■■■■ 4.05
HOMER3-202ENST00000392351 CDK13Q14004 1512 aaKnown RBP40.34■■■■■ 4.05
HOMER3-202ENST00000392351 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.32■■■■■ 4.05
HOMER3-202ENST00000392351 HNRNPUL2Q1KMD3 747 aaKnown RBP40.32■■■■■ 4.05
HOMER3-202ENST00000392351 ASXL2Q76L83 1435 aa40.32■■■■■ 4.05
HOMER3-202ENST00000392351 CCDC18Q5T9S5 1454 aa40.25■■■■■ 4.03
HOMER3-202ENST00000392351 WDR7Q9Y4E6 1490 aa40.22■■■■■ 4.03
HOMER3-202ENST00000392351 DIP2BQ9P265 1576 aa40.15■■■■■ 4.02
HOMER3-202ENST00000392351 ABCC10Q5T3U5 1492 aa40.14■■■■■ 4.02
HOMER3-202ENST00000392351 KIF13AQ9H1H9 1805 aa40.14■■■■■ 4.02
HOMER3-202ENST00000392351 TRHP20396 242 aaPredicted RBP40.11■■■■■ 4.01
HOMER3-202ENST00000392351 PLEKHD1A6NEE1 506 aa40.1■■■■■ 4.01
HOMER3-202ENST00000392351 CDK11AQ9UQ88 783 aaPredicted RBP40.08■■■■■ 4.01
HOMER3-202ENST00000392351 CFAP43Q8NDM7 1665 aa40.08■■■■■ 4.01
HOMER3-202ENST00000392351 KCNH8Q96L42 1107 aa40.06■■■■■ 4
HOMER3-202ENST00000392351 FAM69CQ0P6D2 419 aa40.02■■■■■ 4
HOMER3-202ENST00000392351 TIAM1Q13009 1591 aa40.02■■■■■ 4
HOMER3-202ENST00000392351 MAGI3Q5TCQ9 1506 aa40.01■■■■□ 3.99
HOMER3-202ENST00000392351 GLI2P10070 1586 aa39.99■■■■□ 3.99
HOMER3-202ENST00000392351 TROQ12816 1431 aaPredicted RBP39.98■■■■□ 3.99
HOMER3-202ENST00000392351 MAP3K1Q13233 1512 aa39.93■■■■□ 3.98
HOMER3-202ENST00000392351 APLP2Q06481 763 aa39.91■■■■□ 3.98
HOMER3-202ENST00000392351 KIF14Q15058 1648 aa39.91■■■■□ 3.98
HOMER3-202ENST00000392351 MTUS2Q5JR59 1369 aa39.9■■■■□ 3.98
HOMER3-202ENST00000392351 ABCA9Q8IUA7 1624 aa39.89■■■■□ 3.98
HOMER3-202ENST00000392351 MAP3K4Q9Y6R4 1608 aa39.89■■■■□ 3.98
HOMER3-202ENST00000392351 TSPOAP1O95153 1857 aa39.87■■■■□ 3.97
HOMER3-202ENST00000392351 EHBP1L1Q8N3D4 1523 aa39.86■■■■□ 3.97
HOMER3-202ENST00000392351 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.85■■■■□ 3.97
HOMER3-202ENST00000392351 TTC37Q6PGP7 1564 aa39.83■■■■□ 3.97
HOMER3-202ENST00000392351 LRRC9Q6ZRR7 1453 aa39.81■■■■□ 3.96
HOMER3-202ENST00000392351 CD109Q6YHK3 1445 aa39.77■■■■□ 3.96
HOMER3-202ENST00000392351 KANK4Q5T7N3 995 aaPredicted RBP39.75■■■■□ 3.95
HOMER3-202ENST00000392351 PPRC1Q5VV67 1664 aaKnown RBP39.75■■■■□ 3.95
HOMER3-202ENST00000392351 SUPT6HQ7KZ85 1726 aaKnown RBP39.72■■■■□ 3.95
HOMER3-202ENST00000392351 MYO5CQ9NQX4 1742 aa39.7■■■■□ 3.95
HOMER3-202ENST00000392351 CDC42BPAQ5VT25 1732 aa39.62■■■■□ 3.93
HOMER3-202ENST00000392351 NCOA2Q15596 1464 aa39.61■■■■□ 3.93
HOMER3-202ENST00000392351 TEX14Q8IWB6 1497 aa39.61■■■■□ 3.93
HOMER3-202ENST00000392351 PREX2Q70Z35 1606 aa39.58■■■■□ 3.93
HOMER3-202ENST00000392351 PLCH2O75038 1416 aa39.57■■■■□ 3.92
HOMER3-202ENST00000392351 CDC42BPBQ9Y5S2 1711 aa39.56■■■■□ 3.92
HOMER3-202ENST00000392351 CCNB3Q8WWL7 1395 aa39.54■■■■□ 3.92
HOMER3-202ENST00000392351 ARAP3Q8WWN8 1544 aa39.53■■■■□ 3.92
HOMER3-202ENST00000392351 GPATCH8Q9UKJ3 1502 aaKnown RBP39.51■■■■□ 3.92
HOMER3-202ENST00000392351 ITSN2Q9NZM3 1697 aa39.51■■■■□ 3.92
HOMER3-202ENST00000392351 ARHGAP5Q13017 1502 aa39.51■■■■□ 3.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms