RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 MAGI1Q96QZ7 1491 aaPredicted RBP30.92■■■□□ 2.54
CSNK1D-203ENST00000392334 CLIP1P30622 1438 aa30.89■■■□□ 2.54
CSNK1D-203ENST00000392334 FBLN2P98095 1184 aa30.87■■■□□ 2.53
CSNK1D-203ENST00000392334 CHMP7Q8WUX9 453 aaPredicted RBP30.83■■■□□ 2.53
CSNK1D-203ENST00000392334 SYNJ2O15056 1496 aa30.83■■■□□ 2.53
CSNK1D-203ENST00000392334 GRIN2AQ12879 1464 aa30.79■■■□□ 2.52
CSNK1D-203ENST00000392334 CTTNBP2Q8WZ74 1663 aa30.72■■■□□ 2.51
CSNK1D-203ENST00000392334 CHD1O14646 1710 aa30.69■■■□□ 2.5
CSNK1D-203ENST00000392334 CEP170Q5SW79 1584 aa30.63■■■□□ 2.49
CSNK1D-203ENST00000392334 TTBK1Q5TCY1 1321 aaPredicted RBP30.63■■■□□ 2.49
CSNK1D-203ENST00000392334 NUP160Q12769 1436 aa30.57■■■□□ 2.48
CSNK1D-203ENST00000392334 ARHGAP35Q9NRY4 1499 aa30.56■■■□□ 2.48
CSNK1D-203ENST00000392334 VPS8Q8N3P4 1428 aa30.56■■■□□ 2.48
CSNK1D-203ENST00000392334 ARAP1Q96P48 1450 aa30.55■■■□□ 2.48
CSNK1D-203ENST00000392334 P3H3Q8IVL6 736 aa30.55■■■□□ 2.48
CSNK1D-203ENST00000392334 IQGAP2Q13576 1575 aa30.54■■■□□ 2.48
CSNK1D-203ENST00000392334 KIAA0586Q9BVV6 1533 aa30.53■■■□□ 2.48
CSNK1D-203ENST00000392334 APLP2Q06481 763 aa30.39■■■□□ 2.45
CSNK1D-203ENST00000392334 JPH4Q96JJ6 628 aa30.37■■■□□ 2.45
CSNK1D-203ENST00000392334 SAMD9Q5K651 1589 aa30.36■■■□□ 2.45
CSNK1D-203ENST00000392334 FHOD3Q2V2M9 1422 aa30.36■■■□□ 2.45
CSNK1D-203ENST00000392334 UGGT2Q9NYU1 1516 aa30.36■■■□□ 2.45
CSNK1D-203ENST00000392334 EFCAB5A4FU69 1503 aa30.35■■■□□ 2.45
CSNK1D-203ENST00000392334 DISP1Q96F81 1524 aa30.3■■■□□ 2.44
CSNK1D-203ENST00000392334 CLASP1Q7Z460 1538 aa30.28■■■□□ 2.44
CSNK1D-203ENST00000392334 OSCARQ8IYS5 282 aa30.27■■■□□ 2.44
CSNK1D-203ENST00000392334 ATP1B4Q9UN42 357 aaPredicted RBP30.25■■■□□ 2.43
CSNK1D-203ENST00000392334 KIAA0556O60303 1618 aa30.24■■■□□ 2.43
CSNK1D-203ENST00000392334 PRG4Q92954 1404 aaPredicted RBP30.21■■■□□ 2.43
CSNK1D-203ENST00000392334 SHROOM2Q13796 1616 aa30.2■■■□□ 2.42
CSNK1D-203ENST00000392334 KANK4Q5T7N3 995 aaPredicted RBP30.18■■■□□ 2.42
CSNK1D-203ENST00000392334 CARMIL2Q6F5E8 1435 aa30.16■■■□□ 2.42
CSNK1D-203ENST00000392334 ERCC6L2Q5T890 1561 aa30.14■■■□□ 2.42
CSNK1D-203ENST00000392334 FMN1Q68DA7 1419 aa30.11■■■□□ 2.41
CSNK1D-203ENST00000392334 PCF11O94913 1555 aaKnown RBP30.09■■■□□ 2.41
CSNK1D-203ENST00000392334 CASKIN1Q8WXD9 1431 aa30■■■□□ 2.39
CSNK1D-203ENST00000392334 CCER1Q8TC90 406 aaPredicted RBP29.98■■■□□ 2.39
CSNK1D-203ENST00000392334 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.97■■■□□ 2.39
CSNK1D-203ENST00000392334 FYCO1Q9BQS8 1478 aa29.97■■■□□ 2.39
CSNK1D-203ENST00000392334 PLB1Q6P1J6 1458 aa29.96■■■□□ 2.39
CSNK1D-203ENST00000392334 PTPRGP23470 1445 aa29.95■■■□□ 2.39
CSNK1D-203ENST00000392334 TIAM1Q13009 1591 aa29.94■■■□□ 2.38
CSNK1D-203ENST00000392334 LRRIQ1Q96JM4 1722 aa29.92■■■□□ 2.38
CSNK1D-203ENST00000392334 ARID3CA6NKF2 412 aa29.92■■■□□ 2.38
CSNK1D-203ENST00000392334 RAPGEF6Q8TEU7 1601 aa29.89■■■□□ 2.38
CSNK1D-203ENST00000392334 MAP3K1Q13233 1512 aa29.86■■■□□ 2.37
CSNK1D-203ENST00000392334 LRRC9Q6ZRR7 1453 aa29.86■■■□□ 2.37
CSNK1D-203ENST00000392334 HECW1Q76N89 1606 aa29.84■■■□□ 2.37
CSNK1D-203ENST00000392334 NUP153P49790 1475 aaKnown RBP29.83■■■□□ 2.37
CSNK1D-203ENST00000392334 ABCA8O94911 1581 aa29.82■■■□□ 2.36
CSNK1D-203ENST00000392334 CFAP43Q8NDM7 1665 aa29.8■■■□□ 2.36
CSNK1D-203ENST00000392334 EPRSP07814 1512 aaKnown RBP29.79■■■□□ 2.36
CSNK1D-203ENST00000392334 CDK13Q14004 1512 aaKnown RBP29.79■■■□□ 2.36
CSNK1D-203ENST00000392334 HNRNPUL2Q1KMD3 747 aaKnown RBP29.78■■■□□ 2.36
CSNK1D-203ENST00000392334 SCAF1Q9H7N4 1312 aaKnown RBP29.77■■■□□ 2.36
CSNK1D-203ENST00000392334 ARHGEF11O15085 1522 aa29.77■■■□□ 2.36
CSNK1D-203ENST00000392334 UACAQ9BZF9 1416 aa29.76■■■□□ 2.35
CSNK1D-203ENST00000392334 MTUS2Q5JR59 1369 aa29.72■■■□□ 2.35
CSNK1D-203ENST00000392334 CCDC18Q5T9S5 1454 aa29.72■■■□□ 2.35
CSNK1D-203ENST00000392334 PELP1Q8IZL8 1130 aaKnown RBP29.69■■■□□ 2.34
CSNK1D-203ENST00000392334 PHLDB1Q86UU1 1377 aa29.68■■■□□ 2.34
CSNK1D-203ENST00000392334 ABCC2Q92887 1545 aa29.67■■■□□ 2.34
CSNK1D-203ENST00000392334 RIMBP3CA6NJZ7 1639 aa29.67■■■□□ 2.34
CSNK1D-203ENST00000392334 RIMBP3BA6NNM3 1639 aa29.67■■■□□ 2.34
CSNK1D-203ENST00000392334 RIMBP3Q9UFD9 1639 aa29.67■■■□□ 2.34
CSNK1D-203ENST00000392334 MAGI3Q5TCQ9 1506 aa29.66■■■□□ 2.34
CSNK1D-203ENST00000392334 ATP10BO94823 1461 aa29.66■■■□□ 2.34
CSNK1D-203ENST00000392334 RRBP1Q9P2E9 1410 aaKnown RBP29.61■■■□□ 2.33
CSNK1D-203ENST00000392334 ADCY10Q96PN6 1610 aa29.61■■■□□ 2.33
CSNK1D-203ENST00000392334 CCNB3Q8WWL7 1395 aa29.6■■■□□ 2.33
CSNK1D-203ENST00000392334 ITGAEP38570 1179 aa29.59■■■□□ 2.33
CSNK1D-203ENST00000392334 UHRF1BP1LA0JNW5 1464 aa29.58■■■□□ 2.33
CSNK1D-203ENST00000392334 CYB5RLQ6IPT4 315 aa29.57■■■□□ 2.32
CSNK1D-203ENST00000392334 DIEXFQ68CQ4 756 aaKnown RBP29.56■■■□□ 2.32
CSNK1D-203ENST00000392334 FAM50AQ14320 339 aaKnown RBP29.54■■■□□ 2.32
CSNK1D-203ENST00000392334 EHBP1L1Q8N3D4 1523 aa29.53■■■□□ 2.32
CSNK1D-203ENST00000392334 ACIN1Q9UKV3 1341 aaKnown RBP29.52■■■□□ 2.32
CSNK1D-203ENST00000392334 CDK11AQ9UQ88 783 aaPredicted RBP29.52■■■□□ 2.32
CSNK1D-203ENST00000392334 ZCCHC11Q5TAX3 1644 aaKnown RBP29.51■■■□□ 2.32
CSNK1D-203ENST00000392334 KDM5BQ9UGL1 1544 aa29.51■■■□□ 2.31
CSNK1D-203ENST00000392334 NCOA2Q15596 1464 aa29.5■■■□□ 2.31
CSNK1D-203ENST00000392334 PLEKHD1A6NEE1 506 aa29.49■■■□□ 2.31
CSNK1D-203ENST00000392334 SUPT6HQ7KZ85 1726 aaKnown RBP29.45■■■□□ 2.31
CSNK1D-203ENST00000392334 TROQ12816 1431 aaPredicted RBP29.45■■■□□ 2.31
CSNK1D-203ENST00000392334 KIF14Q15058 1648 aa29.4■■■□□ 2.3
CSNK1D-203ENST00000392334 FGD6Q6ZV73 1430 aa29.38■■■□□ 2.29
CSNK1D-203ENST00000392334 MYOM3Q5VTT5 1437 aa29.36■■■□□ 2.29
CSNK1D-203ENST00000392334 ZNF316A6NFI3 1004 aaPredicted RBP29.36■■■□□ 2.29
CSNK1D-203ENST00000392334 NEUROD1Q13562 356 aa29.36■■■□□ 2.29
CSNK1D-203ENST00000392334 NPM1P06748 294 aaKnown RBP eCLIP29.35■■■□□ 2.29
CSNK1D-203ENST00000392334 CENPBP07199 599 aaPredicted RBP29.35■■■□□ 2.29
CSNK1D-203ENST00000392334 KCNH8Q96L42 1107 aa29.34■■■□□ 2.29
CSNK1D-203ENST00000392334 ASXL2Q76L83 1435 aa29.28■■■□□ 2.28
CSNK1D-203ENST00000392334 WDR7Q9Y4E6 1490 aa29.25■■■□□ 2.27
CSNK1D-203ENST00000392334 ABCC10Q5T3U5 1492 aa29.24■■■□□ 2.27
CSNK1D-203ENST00000392334 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.21■■■□□ 2.271e-15■□□□□ 9.2
CSNK1D-203ENST00000392334 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.2■■■□□ 2.262e-11■■■■■ 30.8
CSNK1D-203ENST00000392334 DNAJC5Q9H3Z4 198 aa29.2■■■□□ 2.26
CSNK1D-203ENST00000392334 TTC37Q6PGP7 1564 aa29.2■■■□□ 2.26
CSNK1D-203ENST00000392334 GPATCH8Q9UKJ3 1502 aaKnown RBP29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms