RNA–Protein interactions for RNA: ENST00000392114.6

VIL1-202, Transcript of villin 1, humanhuman

TSL 2 BASIC

Gene VIL1, Length 1,968 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-202ENST00000392114 CHMP7Q8WUX9 453 aaPredicted RBP18.9■□□□□ 0.62
VIL1-202ENST00000392114 EFCAB5A4FU69 1503 aa18.9■□□□□ 0.62
VIL1-202ENST00000392114 GRIN2AQ12879 1464 aa18.89■□□□□ 0.61
VIL1-202ENST00000392114 ARHGAP35Q9NRY4 1499 aa18.88■□□□□ 0.61
VIL1-202ENST00000392114 APLP2Q06481 763 aa18.86■□□□□ 0.61
VIL1-202ENST00000392114 ARAP1Q96P48 1450 aa18.85■□□□□ 0.61
VIL1-202ENST00000392114 IQGAP2Q13576 1575 aa18.83■□□□□ 0.61
VIL1-202ENST00000392114 KIAA0586Q9BVV6 1533 aa18.83■□□□□ 0.6
VIL1-202ENST00000392114 FBLN2P98095 1184 aa18.82■□□□□ 0.6
VIL1-202ENST00000392114 TRIM26Q12899 539 aaPredicted RBP18.79■□□□□ 0.6
VIL1-202ENST00000392114 SAMD9Q5K651 1589 aa18.77■□□□□ 0.6
VIL1-202ENST00000392114 NUP160Q12769 1436 aa18.75■□□□□ 0.59
VIL1-202ENST00000392114 FMN1Q68DA7 1419 aa18.75■□□□□ 0.59
VIL1-202ENST00000392114 UGGT2Q9NYU1 1516 aa18.75■□□□□ 0.59
VIL1-202ENST00000392114 CEP170Q5SW79 1584 aa18.72■□□□□ 0.59
VIL1-202ENST00000392114 P3H3Q8IVL6 736 aa18.72■□□□□ 0.59
VIL1-202ENST00000392114 CHD1O14646 1710 aa18.7■□□□□ 0.58
VIL1-202ENST00000392114 FHOD3Q2V2M9 1422 aa18.7■□□□□ 0.58
VIL1-202ENST00000392114 PCGF6Q9BYE7 350 aa18.67■□□□□ 0.58
VIL1-202ENST00000392114 MAP3K1Q13233 1512 aa18.67■□□□□ 0.58
VIL1-202ENST00000392114 CASKIN1Q8WXD9 1431 aa18.65■□□□□ 0.58
VIL1-202ENST00000392114 FYCO1Q9BQS8 1478 aa18.65■□□□□ 0.58
VIL1-202ENST00000392114 CARMIL2Q6F5E8 1435 aa18.65■□□□□ 0.58
VIL1-202ENST00000392114 PPARGC1BQ86YN6 1023 aaKnown RBP18.64■□□□□ 0.58
VIL1-202ENST00000392114 JPH4Q96JJ6 628 aa18.64■□□□□ 0.58
VIL1-202ENST00000392114 KIAA0556O60303 1618 aa18.62■□□□□ 0.57
VIL1-202ENST00000392114 PCF11O94913 1555 aaKnown RBP18.6■□□□□ 0.57
VIL1-202ENST00000392114 DISP1Q96F81 1524 aa18.59■□□□□ 0.57
VIL1-202ENST00000392114 ATP1B4Q9UN42 357 aaPredicted RBP18.58■□□□□ 0.56
VIL1-202ENST00000392114 TIAM1Q13009 1591 aa18.57■□□□□ 0.56
VIL1-202ENST00000392114 CFAP43Q8NDM7 1665 aa18.54■□□□□ 0.56
VIL1-202ENST00000392114 TTBK1Q5TCY1 1321 aaPredicted RBP18.52■□□□□ 0.56
VIL1-202ENST00000392114 HECW1Q76N89 1606 aa18.52■□□□□ 0.56
VIL1-202ENST00000392114 CCDC18Q5T9S5 1454 aa18.52■□□□□ 0.55
VIL1-202ENST00000392114 SHROOM2Q13796 1616 aa18.51■□□□□ 0.55
VIL1-202ENST00000392114 PRG4Q92954 1404 aaPredicted RBP18.49■□□□□ 0.55
VIL1-202ENST00000392114 KANK4Q5T7N3 995 aaPredicted RBP18.49■□□□□ 0.55
VIL1-202ENST00000392114 LRRC9Q6ZRR7 1453 aa18.49■□□□□ 0.55
VIL1-202ENST00000392114 CLASP1Q7Z460 1538 aa18.47■□□□□ 0.55
VIL1-202ENST00000392114 RAPGEF6Q8TEU7 1601 aa18.46■□□□□ 0.55
VIL1-202ENST00000392114 LRRIQ1Q96JM4 1722 aa18.42■□□□□ 0.54
VIL1-202ENST00000392114 OSCARQ8IYS5 282 aa18.42■□□□□ 0.54
VIL1-202ENST00000392114 EPRSP07814 1512 aaKnown RBP18.42■□□□□ 0.54
VIL1-202ENST00000392114 MTUS2Q5JR59 1369 aa18.41■□□□□ 0.54
VIL1-202ENST00000392114 PTPRGP23470 1445 aa18.41■□□□□ 0.54
VIL1-202ENST00000392114 CDK11AQ9UQ88 783 aaPredicted RBP18.41■□□□□ 0.54
VIL1-202ENST00000392114 EHBP1L1Q8N3D4 1523 aa18.37■□□□□ 0.53
VIL1-202ENST00000392114 ABCA8O94911 1581 aa18.35■□□□□ 0.53
VIL1-202ENST00000392114 NUP153P49790 1475 aaKnown RBP18.35■□□□□ 0.53
VIL1-202ENST00000392114 SUPT6HQ7KZ85 1726 aaKnown RBP18.35■□□□□ 0.53
VIL1-202ENST00000392114 PLB1Q6P1J6 1458 aa18.35■□□□□ 0.53
VIL1-202ENST00000392114 RRBP1Q9P2E9 1410 aaKnown RBP18.34■□□□□ 0.53
VIL1-202ENST00000392114 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.33■□□□□ 0.52
VIL1-202ENST00000392114 HNRNPUL2Q1KMD3 747 aaKnown RBP18.33■□□□□ 0.52
VIL1-202ENST00000392114 CDK13Q14004 1512 aaKnown RBP18.3■□□□□ 0.52
VIL1-202ENST00000392114 CCNB3Q8WWL7 1395 aa18.3■□□□□ 0.52
VIL1-202ENST00000392114 UACAQ9BZF9 1416 aa18.3■□□□□ 0.52
VIL1-202ENST00000392114 ERCC6L2Q5T890 1561 aa18.27■□□□□ 0.51
VIL1-202ENST00000392114 NCOA2Q15596 1464 aa18.26■□□□□ 0.51
VIL1-202ENST00000392114 PHLDB1Q86UU1 1377 aa18.26■□□□□ 0.51
VIL1-202ENST00000392114 PLEKHD1A6NEE1 506 aa18.25■□□□□ 0.51
VIL1-202ENST00000392114 ARID3CA6NKF2 412 aa18.24■□□□□ 0.51
VIL1-202ENST00000392114 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.24■□□□□ 0.51
VIL1-202ENST00000392114 MAGI3Q5TCQ9 1506 aa18.24■□□□□ 0.51
VIL1-202ENST00000392114 ATP10BO94823 1461 aa18.23■□□□□ 0.51
VIL1-202ENST00000392114 TROQ12816 1431 aaPredicted RBP18.23■□□□□ 0.51
VIL1-202ENST00000392114 ABCC2Q92887 1545 aa18.23■□□□□ 0.51
VIL1-202ENST00000392114 ARHGEF11O15085 1522 aa18.22■□□□□ 0.51
VIL1-202ENST00000392114 UHRF1BP1LA0JNW5 1464 aa18.22■□□□□ 0.51
VIL1-202ENST00000392114 MYOM3Q5VTT5 1437 aa18.21■□□□□ 0.51
VIL1-202ENST00000392114 FGD6Q6ZV73 1430 aa18.19■□□□□ 0.5
VIL1-202ENST00000392114 ADCY10Q96PN6 1610 aa18.18■□□□□ 0.5
VIL1-202ENST00000392114 MIA2Q96PC5 1412 aa18.17■□□□□ 0.5
VIL1-202ENST00000392114 FAM50AQ14320 339 aaKnown RBP18.17■□□□□ 0.5
VIL1-202ENST00000392114 KIF14Q15058 1648 aa18.14■□□□□ 0.49
VIL1-202ENST00000392114 ITSN2Q9NZM3 1697 aa18.13■□□□□ 0.49
VIL1-202ENST00000392114 KDM5BQ9UGL1 1544 aa18.12■□□□□ 0.49
VIL1-202ENST00000392114 PTPN23Q9H3S7 1636 aa18.11■□□□□ 0.49
VIL1-202ENST00000392114 ZEB1P37275 1124 aaPredicted RBP18.1■□□□□ 0.49
VIL1-202ENST00000392114 HRCP23327 699 aa18.09■□□□□ 0.49
VIL1-202ENST00000392114 ZCCHC11Q5TAX3 1644 aaKnown RBP18.09■□□□□ 0.49
VIL1-202ENST00000392114 TCOF1Q13428 1488 aaKnown RBP18.09■□□□□ 0.49
VIL1-202ENST00000392114 ITGAEP38570 1179 aa18.08■□□□□ 0.48
VIL1-202ENST00000392114 NPM1P06748 294 aaKnown RBP eCLIP18.06■□□□□ 0.48
VIL1-202ENST00000392114 CCER1Q8TC90 406 aaPredicted RBP18.04■□□□□ 0.48
VIL1-202ENST00000392114 CFDP1Q9UEE9 299 aaPredicted RBP18.04■□□□□ 0.48
VIL1-202ENST00000392114 GPATCH8Q9UKJ3 1502 aaKnown RBP18.03■□□□□ 0.48
VIL1-202ENST00000392114 ABCC10Q5T3U5 1492 aa18.02■□□□□ 0.48
VIL1-202ENST00000392114 CDC42BPAQ5VT25 1732 aa18.01■□□□□ 0.47
VIL1-202ENST00000392114 SETD5Q9C0A6 1442 aa17.98■□□□□ 0.47
VIL1-202ENST00000392114 KCNH8Q96L42 1107 aa17.96■□□□□ 0.47
VIL1-202ENST00000392114 WDR7Q9Y4E6 1490 aa17.95■□□□□ 0.46
VIL1-202ENST00000392114 PREX2Q70Z35 1606 aa17.95■□□□□ 0.46
VIL1-202ENST00000392114 MYO5CQ9NQX4 1742 aa17.95■□□□□ 0.46
VIL1-202ENST00000392114 ACIN1Q9UKV3 1341 aaKnown RBP17.95■□□□□ 0.46
VIL1-202ENST00000392114 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.95■□□□□ 0.46
VIL1-202ENST00000392114 CAMSAP2Q08AD1 1489 aa17.94■□□□□ 0.46
VIL1-202ENST00000392114 RIMBP3CA6NJZ7 1639 aa17.94■□□□□ 0.46
VIL1-202ENST00000392114 RIMBP3BA6NNM3 1639 aa17.94■□□□□ 0.46
VIL1-202ENST00000392114 DNMT1P26358 1616 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms