RNA–Protein interactions for RNA: ENST00000390398.3

TRBV25-1-202, Transcript of T cell receptor beta variable 25-1, humanhuman

APPRIS P1 BASIC

Gene TRBV25-1, Length 381 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1-202ENST00000390398 CLIP1P30622 1438 aa11.62□□□□□ -0.55
TRBV25-1-202ENST00000390398 CEP170Q5SW79 1584 aa11.6□□□□□ -0.55
TRBV25-1-202ENST00000390398 RANGAP1P46060 587 aaPredicted RBP11.59□□□□□ -0.55
TRBV25-1-202ENST00000390398 ARHGAP35Q9NRY4 1499 aa11.58□□□□□ -0.56
TRBV25-1-202ENST00000390398 CHMP7Q8WUX9 453 aaPredicted RBP11.58□□□□□ -0.56
TRBV25-1-202ENST00000390398 IQGAP2Q13576 1575 aa11.58□□□□□ -0.56
TRBV25-1-202ENST00000390398 ARAP1Q96P48 1450 aa11.57□□□□□ -0.56
TRBV25-1-202ENST00000390398 NUP160Q12769 1436 aa11.57□□□□□ -0.56
TRBV25-1-202ENST00000390398 FBLN2P98095 1184 aa11.56□□□□□ -0.56
TRBV25-1-202ENST00000390398 KIAA0586Q9BVV6 1533 aa11.55□□□□□ -0.56
TRBV25-1-202ENST00000390398 SAMD9Q5K651 1589 aa11.55□□□□□ -0.56
TRBV25-1-202ENST00000390398 EFCAB5A4FU69 1503 aa11.55□□□□□ -0.56
TRBV25-1-202ENST00000390398 UGGT2Q9NYU1 1516 aa11.53□□□□□ -0.56
TRBV25-1-202ENST00000390398 VPS8Q8N3P4 1428 aa11.52□□□□□ -0.57
TRBV25-1-202ENST00000390398 FHOD3Q2V2M9 1422 aa11.49□□□□□ -0.57
TRBV25-1-202ENST00000390398 P3H3Q8IVL6 736 aa11.48□□□□□ -0.57
TRBV25-1-202ENST00000390398 DISP1Q96F81 1524 aa11.48□□□□□ -0.57
TRBV25-1-202ENST00000390398 KIAA0556O60303 1618 aa11.47□□□□□ -0.57
TRBV25-1-202ENST00000390398 CLASP1Q7Z460 1538 aa11.47□□□□□ -0.57
TRBV25-1-202ENST00000390398 SHROOM2Q13796 1616 aa11.46□□□□□ -0.57
TRBV25-1-202ENST00000390398 JPH4Q96JJ6 628 aa11.44□□□□□ -0.58
TRBV25-1-202ENST00000390398 PCF11O94913 1555 aaKnown RBP11.44□□□□□ -0.58
TRBV25-1-202ENST00000390398 LRRIQ1Q96JM4 1722 aa11.41□□□□□ -0.58
TRBV25-1-202ENST00000390398 FMN1Q68DA7 1419 aa11.41□□□□□ -0.58
TRBV25-1-202ENST00000390398 FYCO1Q9BQS8 1478 aa11.39□□□□□ -0.59
TRBV25-1-202ENST00000390398 CASKIN1Q8WXD9 1431 aa11.39□□□□□ -0.59
TRBV25-1-202ENST00000390398 PRG4Q92954 1404 aaPredicted RBP11.39□□□□□ -0.59
TRBV25-1-202ENST00000390398 ERCC6L2Q5T890 1561 aa11.38□□□□□ -0.59
TRBV25-1-202ENST00000390398 CARMIL2Q6F5E8 1435 aa11.38□□□□□ -0.59
TRBV25-1-202ENST00000390398 PPARGC1BQ86YN6 1023 aaKnown RBP11.38□□□□□ -0.59
TRBV25-1-202ENST00000390398 CFAP43Q8NDM7 1665 aa11.37□□□□□ -0.59
TRBV25-1-202ENST00000390398 TIAM1Q13009 1591 aa11.36□□□□□ -0.59
TRBV25-1-202ENST00000390398 MAP3K1Q13233 1512 aa11.35□□□□□ -0.59
TRBV25-1-202ENST00000390398 OSCARQ8IYS5 282 aa11.35□□□□□ -0.59
TRBV25-1-202ENST00000390398 RAPGEF6Q8TEU7 1601 aa11.35□□□□□ -0.59
TRBV25-1-202ENST00000390398 HECW1Q76N89 1606 aa11.34□□□□□ -0.59
TRBV25-1-202ENST00000390398 APLP2Q06481 763 aa11.33□□□□□ -0.6
TRBV25-1-202ENST00000390398 ABCA8O94911 1581 aa11.32□□□□□ -0.6
TRBV25-1-202ENST00000390398 TTBK1Q5TCY1 1321 aaPredicted RBP11.32□□□□□ -0.6
TRBV25-1-202ENST00000390398 PLB1Q6P1J6 1458 aa11.32□□□□□ -0.6
TRBV25-1-202ENST00000390398 KANK4Q5T7N3 995 aaPredicted RBP11.31□□□□□ -0.6
TRBV25-1-202ENST00000390398 ATP1B4Q9UN42 357 aaPredicted RBP11.31□□□□□ -0.6
TRBV25-1-202ENST00000390398 NUP153P49790 1475 aaKnown RBP11.3□□□□□ -0.6
TRBV25-1-202ENST00000390398 PTPRGP23470 1445 aa11.29□□□□□ -0.6
TRBV25-1-202ENST00000390398 LRRC9Q6ZRR7 1453 aa11.29□□□□□ -0.6
TRBV25-1-202ENST00000390398 EPRSP07814 1512 aaKnown RBP11.29□□□□□ -0.6
TRBV25-1-202ENST00000390398 CCDC18Q5T9S5 1454 aa11.28□□□□□ -0.6
TRBV25-1-202ENST00000390398 CDK13Q14004 1512 aaKnown RBP11.28□□□□□ -0.6
TRBV25-1-202ENST00000390398 MAGI3Q5TCQ9 1506 aa11.26□□□□□ -0.61
TRBV25-1-202ENST00000390398 TRIM26Q12899 539 aaPredicted RBP11.26□□□□□ -0.61
TRBV25-1-202ENST00000390398 UACAQ9BZF9 1416 aa11.25□□□□□ -0.61
TRBV25-1-202ENST00000390398 ARID3CA6NKF2 412 aa11.23□□□□□ -0.61
TRBV25-1-202ENST00000390398 EHBP1L1Q8N3D4 1523 aa11.23□□□□□ -0.61
TRBV25-1-202ENST00000390398 ABCC2Q92887 1545 aa11.23□□□□□ -0.61
TRBV25-1-202ENST00000390398 ATP10BO94823 1461 aa11.22□□□□□ -0.61
TRBV25-1-202ENST00000390398 PCGF6Q9BYE7 350 aa11.22□□□□□ -0.61
TRBV25-1-202ENST00000390398 SUPT6HQ7KZ85 1726 aaKnown RBP11.21□□□□□ -0.61
TRBV25-1-202ENST00000390398 UHRF1BP1LA0JNW5 1464 aa11.21□□□□□ -0.61
TRBV25-1-202ENST00000390398 ADCY10Q96PN6 1610 aa11.2□□□□□ -0.62
TRBV25-1-202ENST00000390398 ARHGEF11O15085 1522 aa11.2□□□□□ -0.62
TRBV25-1-202ENST00000390398 MTUS2Q5JR59 1369 aa11.2□□□□□ -0.62
TRBV25-1-202ENST00000390398 RIMBP3CA6NJZ7 1639 aa11.19□□□□□ -0.62
TRBV25-1-202ENST00000390398 RIMBP3BA6NNM3 1639 aa11.19□□□□□ -0.62
TRBV25-1-202ENST00000390398 ZCCHC11Q5TAX3 1644 aaKnown RBP11.19□□□□□ -0.62
TRBV25-1-202ENST00000390398 RIMBP3Q9UFD9 1639 aa11.19□□□□□ -0.62
TRBV25-1-202ENST00000390398 NCOA2Q15596 1464 aa11.18□□□□□ -0.62
TRBV25-1-202ENST00000390398 PHLDB1Q86UU1 1377 aa11.17□□□□□ -0.62
TRBV25-1-202ENST00000390398 RRBP1Q9P2E9 1410 aaKnown RBP11.17□□□□□ -0.62
TRBV25-1-202ENST00000390398 KDM5BQ9UGL1 1544 aa11.16□□□□□ -0.62
TRBV25-1-202ENST00000390398 TROQ12816 1431 aaPredicted RBP11.16□□□□□ -0.62
TRBV25-1-202ENST00000390398 KIF14Q15058 1648 aa11.16□□□□□ -0.62
TRBV25-1-202ENST00000390398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.15□□□□□ -0.62
TRBV25-1-202ENST00000390398 HNRNPUL2Q1KMD3 747 aaKnown RBP11.15□□□□□ -0.62
TRBV25-1-202ENST00000390398 PHF23Q9BUL5 403 aaPredicted RBP11.14□□□□□ -0.63
TRBV25-1-202ENST00000390398 CDK11AQ9UQ88 783 aaPredicted RBP11.14□□□□□ -0.63
TRBV25-1-202ENST00000390398 SENP3Q9H4L4 574 aaPredicted RBP11.12□□□□□ -0.63
TRBV25-1-202ENST00000390398 PLEKHD1A6NEE1 506 aa11.11□□□□□ -0.63
TRBV25-1-202ENST00000390398 CCNB3Q8WWL7 1395 aa11.11□□□□□ -0.63
TRBV25-1-202ENST00000390398 MYOM3Q5VTT5 1437 aa11.1□□□□□ -0.63
TRBV25-1-202ENST00000390398 CDC42BPAQ5VT25 1732 aa11.1□□□□□ -0.63
TRBV25-1-202ENST00000390398 ABCC10Q5T3U5 1492 aa11.1□□□□□ -0.63
TRBV25-1-202ENST00000390398 FGD6Q6ZV73 1430 aa11.09□□□□□ -0.63
TRBV25-1-202ENST00000390398 ITSN2Q9NZM3 1697 aa11.09□□□□□ -0.63
TRBV25-1-202ENST00000390398 PTPN23Q9H3S7 1636 aa11.09□□□□□ -0.63
TRBV25-1-202ENST00000390398 GPATCH8Q9UKJ3 1502 aaKnown RBP11.07□□□□□ -0.64
TRBV25-1-202ENST00000390398 TTC37Q6PGP7 1564 aa11.07□□□□□ -0.64
TRBV25-1-202ENST00000390398 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.06□□□□□ -0.64
TRBV25-1-202ENST00000390398 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.06□□□□□ -0.64
TRBV25-1-202ENST00000390398 CYB5RLQ6IPT4 315 aa11.06□□□□□ -0.64
TRBV25-1-202ENST00000390398 MIA2Q96PC5 1412 aa11.06□□□□□ -0.64
TRBV25-1-202ENST00000390398 CDC42BPBQ9Y5S2 1711 aa11.06□□□□□ -0.64
TRBV25-1-202ENST00000390398 TCOF1Q13428 1488 aaKnown RBP11.06□□□□□ -0.64
TRBV25-1-202ENST00000390398 PREX2Q70Z35 1606 aa11.05□□□□□ -0.64
TRBV25-1-202ENST00000390398 WDR7Q9Y4E6 1490 aa11.05□□□□□ -0.64
TRBV25-1-202ENST00000390398 MYO5CQ9NQX4 1742 aa11.04□□□□□ -0.64
TRBV25-1-202ENST00000390398 ASXL2Q76L83 1435 aa11.04□□□□□ -0.64
TRBV25-1-202ENST00000390398 FAM50AQ14320 339 aaKnown RBP11.03□□□□□ -0.64
TRBV25-1-202ENST00000390398 ABCA9Q8IUA7 1624 aa11.02□□□□□ -0.65
TRBV25-1-202ENST00000390398 MAPKBP1O60336 1514 aa11.01□□□□□ -0.65
TRBV25-1-202ENST00000390398 NPM1P06748 294 aaKnown RBP eCLIP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms