RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 DHX57Q6P158 1386 aaKnown RBP22.19■■□□□ 1.14
SCFD2-201ENST00000388940 EFCAB5A4FU69 1503 aa22.19■■□□□ 1.14
SCFD2-201ENST00000388940 CTTNBP2Q8WZ74 1663 aa22.18■■□□□ 1.14
SCFD2-201ENST00000388940 CFAP43Q8NDM7 1665 aa22.17■■□□□ 1.14
SCFD2-201ENST00000388940 LRRC9Q6ZRR7 1453 aa22.16■■□□□ 1.14
SCFD2-201ENST00000388940 PDS5BQ9NTI5 1447 aa22.15■■□□□ 1.14
SCFD2-201ENST00000388940 ABCA5Q8WWZ7 1642 aa22.13■■□□□ 1.13
SCFD2-201ENST00000388940 PCF11O94913 1555 aaKnown RBP22.12■■□□□ 1.13
SCFD2-201ENST00000388940 AQRO60306 1485 aaKnown RBP eCLIP22.11■■□□□ 1.13
SCFD2-201ENST00000388940 FYCO1Q9BQS8 1478 aa22.08■■□□□ 1.13
SCFD2-201ENST00000388940 CASKIN1Q8WXD9 1431 aa22.06■■□□□ 1.12
SCFD2-201ENST00000388940 SCAF1Q9H7N4 1312 aaKnown RBP22.05■■□□□ 1.12
SCFD2-201ENST00000388940 KIF21AQ7Z4S6 1674 aa22.05■■□□□ 1.12
SCFD2-201ENST00000388940 FHOD3Q2V2M9 1422 aa22.04■■□□□ 1.12
SCFD2-201ENST00000388940 GAPVD1Q14C86 1478 aa22.03■■□□□ 1.12
SCFD2-201ENST00000388940 ACIN1Q9UKV3 1341 aaKnown RBP22.02■■□□□ 1.12
SCFD2-201ENST00000388940 PHLDB1Q86UU1 1377 aa22.01■■□□□ 1.11
SCFD2-201ENST00000388940 FMN1Q68DA7 1419 aa22■■□□□ 1.11
SCFD2-201ENST00000388940 P3H3Q8IVL6 736 aa21.99■■□□□ 1.11
SCFD2-201ENST00000388940 SAMD9Q5K651 1589 aa21.99■■□□□ 1.11
SCFD2-201ENST00000388940 TDRD9Q8NDG6 1382 aaKnown RBP21.99■■□□□ 1.11
SCFD2-201ENST00000388940 TARBP1Q13395 1621 aaKnown RBP21.98■■□□□ 1.11
SCFD2-201ENST00000388940 CENPBP07199 599 aaPredicted RBP21.96■■□□□ 1.11
SCFD2-201ENST00000388940 DNAJC5BQ9UF47 199 aa21.95■■□□□ 1.1
SCFD2-201ENST00000388940 RAB3GAP2Q9H2M9 1393 aa21.95■■□□□ 1.1
SCFD2-201ENST00000388940 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.95■■□□□ 1.1
SCFD2-201ENST00000388940 SNAPC4Q5SXM2 1469 aa21.94■■□□□ 1.1
SCFD2-201ENST00000388940 NEUROD1Q13562 356 aa21.93■■□□□ 1.1
SCFD2-201ENST00000388940 SETD5Q9C0A6 1442 aa21.93■■□□□ 1.1
SCFD2-201ENST00000388940 ITGAEP38570 1179 aa21.91■■□□□ 1.1
SCFD2-201ENST00000388940 THOC2Q8NI27 1593 aaKnown RBP21.87■■□□□ 1.09
SCFD2-201ENST00000388940 PBRM1Q86U86 1689 aa21.86■■□□□ 1.09
SCFD2-201ENST00000388940 ATP1B4Q9UN42 357 aaPredicted RBP21.86■■□□□ 1.09
SCFD2-201ENST00000388940 MAPKBP1O60336 1514 aa21.86■■□□□ 1.09
SCFD2-201ENST00000388940 MIER1Q8N108 512 aa21.84■■□□□ 1.09
SCFD2-201ENST00000388940 GRIN2BQ13224 1484 aa21.83■■□□□ 1.09
SCFD2-201ENST00000388940 LRRIQ1Q96JM4 1722 aa21.83■■□□□ 1.09
SCFD2-201ENST00000388940 FAM50AQ14320 339 aaKnown RBP21.83■■□□□ 1.08
SCFD2-201ENST00000388940 MRC2Q9UBG0 1479 aa21.82■■□□□ 1.08
SCFD2-201ENST00000388940 FGD6Q6ZV73 1430 aa21.79■■□□□ 1.08
SCFD2-201ENST00000388940 ADAMTS12P58397 1594 aa21.77■■□□□ 1.08
SCFD2-201ENST00000388940 MTUS2Q5JR59 1369 aa21.76■■□□□ 1.07
SCFD2-201ENST00000388940 SUPT6HQ7KZ85 1726 aaKnown RBP21.73■■□□□ 1.07
SCFD2-201ENST00000388940 EHBP1L1Q8N3D4 1523 aa21.73■■□□□ 1.07
SCFD2-201ENST00000388940 IQGAP2Q13576 1575 aa21.72■■□□□ 1.07
SCFD2-201ENST00000388940 CCDC18Q5T9S5 1454 aa21.71■■□□□ 1.07
SCFD2-201ENST00000388940 NCOA2Q15596 1464 aa21.7■■□□□ 1.06
SCFD2-201ENST00000388940 TIMELESSQ9UNS1 1208 aa21.7■■□□□ 1.06
SCFD2-201ENST00000388940 IFT140Q96RY7 1462 aa21.69■■□□□ 1.06
SCFD2-201ENST00000388940 MYOM3Q5VTT5 1437 aa21.69■■□□□ 1.06
SCFD2-201ENST00000388940 ARHGEF11O15085 1522 aa21.68■■□□□ 1.06
SCFD2-201ENST00000388940 WDR62O43379 1518 aa21.68■■□□□ 1.06
SCFD2-201ENST00000388940 HECW1Q76N89 1606 aa21.67■■□□□ 1.06
SCFD2-201ENST00000388940 GTF3C3Q9Y5Q9 886 aa21.67■■□□□ 1.06
SCFD2-201ENST00000388940 UGGT2Q9NYU1 1516 aa21.66■■□□□ 1.06
SCFD2-201ENST00000388940 HFM1A2PYH4 1435 aa21.64■■□□□ 1.05
SCFD2-201ENST00000388940 MAGI3Q5TCQ9 1506 aa21.61■■□□□ 1.05
SCFD2-201ENST00000388940 PTPRKQ15262 1439 aa21.61■■□□□ 1.05
SCFD2-201ENST00000388940 PTPN23Q9H3S7 1636 aa21.6■■□□□ 1.05
SCFD2-201ENST00000388940 YTHDC1Q96MU7 727 aaKnown RBP21.6■■□□□ 1.05
SCFD2-201ENST00000388940 EPRSP07814 1512 aaKnown RBP21.58■■□□□ 1.04
SCFD2-201ENST00000388940 TCOF1Q13428 1488 aaKnown RBP21.58■■□□□ 1.04
SCFD2-201ENST00000388940 SIN3AQ96ST3 1273 aa21.57■■□□□ 1.04
SCFD2-201ENST00000388940 ZNF608Q9ULD9 1512 aaPredicted RBP21.57■■□□□ 1.04
SCFD2-201ENST00000388940 UACAQ9BZF9 1416 aa21.56■■□□□ 1.04
SCFD2-201ENST00000388940 KIAA0586Q9BVV6 1533 aa21.55■■□□□ 1.04
SCFD2-201ENST00000388940 NAIPQ13075 1403 aa21.54■■□□□ 1.04
SCFD2-201ENST00000388940 MIA2Q96PC5 1412 aa21.5■■□□□ 1.03
SCFD2-201ENST00000388940 EIF4G3O43432 1585 aaKnown RBP21.5■■□□□ 1.03
SCFD2-201ENST00000388940 KIAA0556O60303 1618 aa21.5■■□□□ 1.03
SCFD2-201ENST00000388940 PPP1R15AO75807 674 aaPredicted RBP21.48■■□□□ 1.03
SCFD2-201ENST00000388940 GCC2Q8IWJ2 1684 aa21.48■■□□□ 1.03
SCFD2-201ENST00000388940 DISP1Q96F81 1524 aa21.48■■□□□ 1.03
SCFD2-201ENST00000388940 AKNAQ7Z591 1439 aa21.48■■□□□ 1.03
SCFD2-201ENST00000388940 GRIN2AQ12879 1464 aa21.47■■□□□ 1.03
SCFD2-201ENST00000388940 CDK13Q14004 1512 aaKnown RBP21.47■■□□□ 1.03
SCFD2-201ENST00000388940 MAGI1Q96QZ7 1491 aaPredicted RBP21.43■■□□□ 1.02
SCFD2-201ENST00000388940 RAPGEF6Q8TEU7 1601 aa21.4■■□□□ 1.02
SCFD2-201ENST00000388940 ERCC6Q03468 1493 aa21.39■■□□□ 1.02
SCFD2-201ENST00000388940 TONSLQ96HA7 1378 aa21.38■■□□□ 1.01
SCFD2-201ENST00000388940 NUP153P49790 1475 aaKnown RBP21.37■■□□□ 1.01
SCFD2-201ENST00000388940 SYNJ2O15056 1496 aa21.36■■□□□ 1.01
SCFD2-201ENST00000388940 CEP170Q5SW79 1584 aa21.32■■□□□ 1
SCFD2-201ENST00000388940 RRP7BPQ9NSQ0 103 aa21.31■■□□□ 1
SCFD2-201ENST00000388940 ROCK1Q13464 1354 aa21.31■■□□□ 1
SCFD2-201ENST00000388940 CDK11AQ9UQ88 783 aaPredicted RBP21.3■■□□□ 1
SCFD2-201ENST00000388940 DNMT1P26358 1616 aaKnown RBP21.3■■□□□ 1
SCFD2-201ENST00000388940 KDM5BQ9UGL1 1544 aa21.3■■□□□ 1
SCFD2-201ENST00000388940 DENND4BO75064 1496 aaPredicted RBP21.29■■□□□ 1
SCFD2-201ENST00000388940 KDM6BO15054 1643 aa21.29■■□□□ 1
SCFD2-201ENST00000388940 CHIC2Q9UKJ5 165 aa21.28■■□□□ 1
SCFD2-201ENST00000388940 DAPK1P53355 1430 aa21.27■■□□□ 1
SCFD2-201ENST00000388940 NUP160Q12769 1436 aa21.27■■□□□ 1
SCFD2-201ENST00000388940 CHMP7Q8WUX9 453 aaPredicted RBP21.27■■□□□ 1
SCFD2-201ENST00000388940 DDX10Q13206 875 aaKnown RBP21.27■□□□□ 0.99
SCFD2-201ENST00000388940 ARID3CA6NKF2 412 aa21.24■□□□□ 0.99
SCFD2-201ENST00000388940 TROQ12816 1431 aaPredicted RBP21.24■□□□□ 0.99
SCFD2-201ENST00000388940 ABCC5O15440 1437 aa21.24■□□□□ 0.99
SCFD2-201ENST00000388940 ADCY10Q96PN6 1610 aa21.24■□□□□ 0.99
SCFD2-201ENST00000388940 CARMIL2Q6F5E8 1435 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms