RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 ADAMTS12P58397 1594 aa20.98■□□□□ 0.95
NEK4-202ENST00000383721 FBLN2P98095 1184 aa20.98■□□□□ 0.95
NEK4-202ENST00000383721 FHAD1B1AJZ9 1412 aa20.95■□□□□ 0.94
NEK4-202ENST00000383721 PRXQ9BXM0 1461 aa20.95■□□□□ 0.94
NEK4-202ENST00000383721 VPS8Q8N3P4 1428 aa20.94■□□□□ 0.94
NEK4-202ENST00000383721 CUL7Q14999 1698 aa20.94■□□□□ 0.94
NEK4-202ENST00000383721 CHMP7Q8WUX9 453 aaPredicted RBP20.92■□□□□ 0.94
NEK4-202ENST00000383721 SYNJ2O15056 1496 aa20.92■□□□□ 0.94
NEK4-202ENST00000383721 SCAF1Q9H7N4 1312 aaKnown RBP20.92■□□□□ 0.94
NEK4-202ENST00000383721 CHD1O14646 1710 aa20.88■□□□□ 0.93
NEK4-202ENST00000383721 GRIN2AQ12879 1464 aa20.87■□□□□ 0.93
NEK4-202ENST00000383721 DIEXFQ68CQ4 756 aaKnown RBP20.87■□□□□ 0.93
NEK4-202ENST00000383721 HNRNPUL2Q1KMD3 747 aaKnown RBP20.82■□□□□ 0.92
NEK4-202ENST00000383721 RANGAP1P46060 587 aaPredicted RBP20.81■□□□□ 0.92
NEK4-202ENST00000383721 APLP2Q06481 763 aa20.79■□□□□ 0.92
NEK4-202ENST00000383721 CEP170Q5SW79 1584 aa20.77■□□□□ 0.92
NEK4-202ENST00000383721 NUP160Q12769 1436 aa20.73■□□□□ 0.91
NEK4-202ENST00000383721 ZNF316A6NFI3 1004 aaPredicted RBP20.72■□□□□ 0.91
NEK4-202ENST00000383721 ACIN1Q9UKV3 1341 aaKnown RBP20.72■□□□□ 0.91
NEK4-202ENST00000383721 OSCARQ8IYS5 282 aa20.71■□□□□ 0.91
NEK4-202ENST00000383721 ARAP1Q96P48 1450 aa20.69■□□□□ 0.9
NEK4-202ENST00000383721 NEUROD1Q13562 356 aa20.69■□□□□ 0.9
NEK4-202ENST00000383721 KIAA0586Q9BVV6 1533 aa20.64■□□□□ 0.9
NEK4-202ENST00000383721 CTTNBP2Q8WZ74 1663 aa20.64■□□□□ 0.9
NEK4-202ENST00000383721 CLASP1Q7Z460 1538 aa20.63■□□□□ 0.89
NEK4-202ENST00000383721 IQGAP2Q13576 1575 aa20.61■□□□□ 0.89
NEK4-202ENST00000383721 KANK4Q5T7N3 995 aaPredicted RBP20.58■□□□□ 0.89
NEK4-202ENST00000383721 JPH4Q96JJ6 628 aa20.57■□□□□ 0.88
NEK4-202ENST00000383721 CENPBP07199 599 aaPredicted RBP20.57■□□□□ 0.88
NEK4-202ENST00000383721 ARHGAP35Q9NRY4 1499 aa20.51■□□□□ 0.87
NEK4-202ENST00000383721 P3H3Q8IVL6 736 aa20.51■□□□□ 0.87
NEK4-202ENST00000383721 SHROOM2Q13796 1616 aa20.51■□□□□ 0.87
NEK4-202ENST00000383721 ERCC6L2Q5T890 1561 aa20.5■□□□□ 0.87
NEK4-202ENST00000383721 PRG4Q92954 1404 aaPredicted RBP20.5■□□□□ 0.87
NEK4-202ENST00000383721 UGGT2Q9NYU1 1516 aa20.49■□□□□ 0.87
NEK4-202ENST00000383721 RRBP1Q9P2E9 1410 aaKnown RBP20.47■□□□□ 0.87
NEK4-202ENST00000383721 DISP1Q96F81 1524 aa20.47■□□□□ 0.87
NEK4-202ENST00000383721 PELP1Q8IZL8 1130 aaKnown RBP20.46■□□□□ 0.87
NEK4-202ENST00000383721 DHX57Q6P158 1386 aaKnown RBP20.46■□□□□ 0.87
NEK4-202ENST00000383721 GTF3C3Q9Y5Q9 886 aa20.46■□□□□ 0.87
NEK4-202ENST00000383721 CLSPNQ9HAW4 1339 aa20.45■□□□□ 0.86
NEK4-202ENST00000383721 MIER1Q8N108 512 aa20.43■□□□□ 0.86
NEK4-202ENST00000383721 SAMD9Q5K651 1589 aa20.42■□□□□ 0.86
NEK4-202ENST00000383721 KIAA0556O60303 1618 aa20.42■□□□□ 0.86
NEK4-202ENST00000383721 FHOD3Q2V2M9 1422 aa20.41■□□□□ 0.86
NEK4-202ENST00000383721 ARHGEF11O15085 1522 aa20.39■□□□□ 0.85
NEK4-202ENST00000383721 CARMIL2Q6F5E8 1435 aa20.39■□□□□ 0.85
NEK4-202ENST00000383721 EFCAB5A4FU69 1503 aa20.38■□□□□ 0.85
NEK4-202ENST00000383721 CCNB3Q8WWL7 1395 aa20.37■□□□□ 0.85
NEK4-202ENST00000383721 YTHDC1Q96MU7 727 aaKnown RBP20.34■□□□□ 0.85
NEK4-202ENST00000383721 RIMBP3CA6NJZ7 1639 aa20.33■□□□□ 0.85
NEK4-202ENST00000383721 RIMBP3BA6NNM3 1639 aa20.33■□□□□ 0.85
NEK4-202ENST00000383721 RIMBP3Q9UFD9 1639 aa20.33■□□□□ 0.85
NEK4-202ENST00000383721 DNAJC5Q9H3Z4 198 aa20.32■□□□□ 0.84
NEK4-202ENST00000383721 PTPRGP23470 1445 aa20.29■□□□□ 0.84
NEK4-202ENST00000383721 MAP3K1Q13233 1512 aa20.28■□□□□ 0.84
NEK4-202ENST00000383721 TIAM1Q13009 1591 aa20.27■□□□□ 0.84
NEK4-202ENST00000383721 ITGAEP38570 1179 aa20.25■□□□□ 0.83
NEK4-202ENST00000383721 CYB5RLQ6IPT4 315 aa20.24■□□□□ 0.83
NEK4-202ENST00000383721 PLB1Q6P1J6 1458 aa20.24■□□□□ 0.83
NEK4-202ENST00000383721 LRRC9Q6ZRR7 1453 aa20.21■□□□□ 0.83
NEK4-202ENST00000383721 FMN1Q68DA7 1419 aa20.2■□□□□ 0.82
NEK4-202ENST00000383721 ARID3CA6NKF2 412 aa20.2■□□□□ 0.82
NEK4-202ENST00000383721 ATP1B4Q9UN42 357 aaPredicted RBP20.19■□□□□ 0.82
NEK4-202ENST00000383721 RAB3GAP2Q9H2M9 1393 aa20.18■□□□□ 0.82
NEK4-202ENST00000383721 PCF11O94913 1555 aaKnown RBP20.17■□□□□ 0.82
NEK4-202ENST00000383721 PHLDB1Q86UU1 1377 aa20.17■□□□□ 0.82
NEK4-202ENST00000383721 ABCA8O94911 1581 aa20.16■□□□□ 0.82
NEK4-202ENST00000383721 UACAQ9BZF9 1416 aa20.16■□□□□ 0.82
NEK4-202ENST00000383721 RAPGEF6Q8TEU7 1601 aa20.14■□□□□ 0.81
NEK4-202ENST00000383721 CASKIN1Q8WXD9 1431 aa20.12■□□□□ 0.81
NEK4-202ENST00000383721 ADCY10Q96PN6 1610 aa20.12■□□□□ 0.81
NEK4-202ENST00000383721 MAPKBP1O60336 1514 aa20.12■□□□□ 0.81
NEK4-202ENST00000383721 NUP153P49790 1475 aaKnown RBP20.11■□□□□ 0.81
NEK4-202ENST00000383721 SETD5Q9C0A6 1442 aa20.1■□□□□ 0.81
NEK4-202ENST00000383721 ABCC2Q92887 1545 aa20.1■□□□□ 0.81
NEK4-202ENST00000383721 CFAP43Q8NDM7 1665 aa20.1■□□□□ 0.81
NEK4-202ENST00000383721 FYCO1Q9BQS8 1478 aa20.08■□□□□ 0.81
NEK4-202ENST00000383721 LRRIQ1Q96JM4 1722 aa20.07■□□□□ 0.8
NEK4-202ENST00000383721 CDK13Q14004 1512 aaKnown RBP20.06■□□□□ 0.8
NEK4-202ENST00000383721 UHRF1BP1LA0JNW5 1464 aa20.06■□□□□ 0.8
NEK4-202ENST00000383721 FAM50AQ14320 339 aaKnown RBP20.06■□□□□ 0.8
NEK4-202ENST00000383721 HECW1Q76N89 1606 aa20.05■□□□□ 0.8
NEK4-202ENST00000383721 EPRSP07814 1512 aaKnown RBP20.04■□□□□ 0.8
NEK4-202ENST00000383721 ATP10BO94823 1461 aa20.04■□□□□ 0.8
NEK4-202ENST00000383721 KDM5BQ9UGL1 1544 aa20■□□□□ 0.79
NEK4-202ENST00000383721 ZCCHC11Q5TAX3 1644 aaKnown RBP19.99■□□□□ 0.79
NEK4-202ENST00000383721 NPM1P06748 294 aaKnown RBP eCLIP19.95■□□□□ 0.78
NEK4-202ENST00000383721 CCDC18Q5T9S5 1454 aa19.95■□□□□ 0.78
NEK4-202ENST00000383721 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.95■□□□□ 0.78
NEK4-202ENST00000383721 SIN3AQ96ST3 1273 aa19.94■□□□□ 0.78
NEK4-202ENST00000383721 MAGI3Q5TCQ9 1506 aa19.93■□□□□ 0.78
NEK4-202ENST00000383721 ASXL2Q76L83 1435 aa19.89■□□□□ 0.77
NEK4-202ENST00000383721 FGD6Q6ZV73 1430 aa19.88■□□□□ 0.77
NEK4-202ENST00000383721 PLEKHD1A6NEE1 506 aa19.88■□□□□ 0.77
NEK4-202ENST00000383721 KCNH8Q96L42 1107 aa19.87■□□□□ 0.77
NEK4-202ENST00000383721 MTUS2Q5JR59 1369 aa19.86■□□□□ 0.77
NEK4-202ENST00000383721 TIMELESSQ9UNS1 1208 aa19.86■□□□□ 0.77
NEK4-202ENST00000383721 CDK11AQ9UQ88 783 aaPredicted RBP19.85■□□□□ 0.77
NEK4-202ENST00000383721 WDR7Q9Y4E6 1490 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms