RNA–Protein interactions for RNA: ENST00000382043.8

NIN-204, Transcript of ninein, humanhuman

TSL 1 (best) BASIC

Gene NIN, Length 4,216 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-204ENST00000382043 RUSC2Q8N2Y8 1516 aa9.71□□□□□ -0.85
NIN-204ENST00000382043 KANK4Q5T7N3 995 aaPredicted RBP9.71□□□□□ -0.85
NIN-204ENST00000382043 EIF4G1Q04637 1599 aaKnown RBP9.7□□□□□ -0.86
NIN-204ENST00000382043 ERICH6Q7L0X2 663 aa9.7□□□□□ -0.86
NIN-204ENST00000382043 STAG3Q9UJ98 1225 aa9.68□□□□□ -0.86
NIN-204ENST00000382043 RGL3Q3MIN7 710 aa9.66□□□□□ -0.86
NIN-204ENST00000382043 SIN3AQ96ST3 1273 aa9.64□□□□□ -0.87
NIN-204ENST00000382043 RAPGEF2Q9Y4G8 1499 aa9.64□□□□□ -0.87
NIN-204ENST00000382043 GTF3C3Q9Y5Q9 886 aa9.64□□□□□ -0.87
NIN-204ENST00000382043 FANCD2Q9BXW9 1451 aa9.63□□□□□ -0.87
NIN-204ENST00000382043 DNAJC5BQ9UF47 199 aa9.63□□□□□ -0.87
NIN-204ENST00000382043 VPS8Q8N3P4 1428 aa9.62□□□□□ -0.87
NIN-204ENST00000382043 FHAD1B1AJZ9 1412 aa9.61□□□□□ -0.87
NIN-204ENST00000382043 CCNB3Q8WWL7 1395 aa9.6□□□□□ -0.87
NIN-204ENST00000382043 NCAPD3P42695 1498 aa9.59□□□□□ -0.87
NIN-204ENST00000382043 SALL2Q9Y467 1007 aaPredicted RBP9.58□□□□□ -0.88
NIN-204ENST00000382043 FHOD3Q2V2M9 1422 aa9.58□□□□□ -0.88
NIN-204ENST00000382043 FAM9BQ8IZU0 186 aa9.58□□□□□ -0.88
NIN-204ENST00000382043 JPH4Q96JJ6 628 aa9.58□□□□□ -0.88
NIN-204ENST00000382043 MIER1Q8N108 512 aa9.57□□□□□ -0.88
NIN-204ENST00000382043 RAD54L2Q9Y4B4 1467 aa9.57□□□□□ -0.88
NIN-204ENST00000382043 SLC24A1O60721 1099 aa9.55□□□□□ -0.88
NIN-204ENST00000382043 FOXD1Q16676 465 aa9.55□□□□□ -0.88
NIN-204ENST00000382043 NESP48681 1621 aa9.54□□□□□ -0.88
NIN-204ENST00000382043 ARID4BQ4LE39 1312 aaPredicted RBP9.54□□□□□ -0.88
NIN-204ENST00000382043 SENP3-EIF4A1A0A087X0R7 540 aa9.54□□□□□ -0.88
NIN-204ENST00000382043 IGF1RP08069 1367 aa9.54□□□□□ -0.88
NIN-204ENST00000382043 EIF4G2P78344 907 aaKnown RBP eCLIP9.54□□□□□ -0.88
NIN-204ENST00000382043 HNRNPUQ00839 825 aaKnown RBP eCLIP9.54□□□□□ -0.88
NIN-204ENST00000382043 BCL11AQ9H165 835 aa9.53□□□□□ -0.88
NIN-204ENST00000382043 FGD5Q6ZNL6 1462 aa9.53□□□□□ -0.88
NIN-204ENST00000382043 CLSPNQ9HAW4 1339 aa9.52□□□□□ -0.89
NIN-204ENST00000382043 ACIN1Q9UKV3 1341 aaKnown RBP9.52□□□□□ -0.89
NIN-204ENST00000382043 CARMIL2Q6F5E8 1435 aa9.52□□□□□ -0.89
NIN-204ENST00000382043 TRHP20396 242 aaPredicted RBP9.51□□□□□ -0.89
NIN-204ENST00000382043 MLECQ14165 292 aa9.5□□□□□ -0.89
NIN-204ENST00000382043 FMN1Q68DA7 1419 aa9.5□□□□□ -0.89
NIN-204ENST00000382043 AQRO60306 1485 aaKnown RBP eCLIP9.5□□□□□ -0.89
NIN-204ENST00000382043 PLEKHG5O94827 1062 aa9.49□□□□□ -0.89
NIN-204ENST00000382043 TMC1Q8TDI8 760 aa9.49□□□□□ -0.89
NIN-204ENST00000382043 MRS2Q9HD23 443 aa9.48□□□□□ -0.89
NIN-204ENST00000382043 GGT6Q6P531 493 aa9.48□□□□□ -0.89
NIN-204ENST00000382043 ARHGAP35Q9NRY4 1499 aa9.48□□□□□ -0.89
NIN-204ENST00000382043 BICRAQ9NZM4 1560 aa9.48□□□□□ -0.89
NIN-204ENST00000382043 PPP1R15AO75807 674 aaPredicted RBP9.48□□□□□ -0.89
NIN-204ENST00000382043 HNRNPMP52272 730 aaKnown RBP eCLIP9.47□□□□□ -0.89
NIN-204ENST00000382043 CARD11Q9BXL7 1154 aa9.47□□□□□ -0.89
NIN-204ENST00000382043 DAXXQ9UER7 740 aaPredicted RBP9.47□□□□□ -0.89
NIN-204ENST00000382043 GAPVD1Q14C86 1478 aa9.47□□□□□ -0.89
NIN-204ENST00000382043 CC2D2AQ9P2K1 1620 aa9.47□□□□□ -0.89
NIN-204ENST00000382043 NEFMP07197 916 aa9.46□□□□□ -0.89
NIN-204ENST00000382043 CFTRP13569 1480 aa9.46□□□□□ -0.9
NIN-204ENST00000382043 DCAF11Q8TEB1 546 aa9.45□□□□□ -0.9
NIN-204ENST00000382043 CANXP27824 592 aaKnown RBP9.45□□□□□ -0.9
NIN-204ENST00000382043 PKD2Q13563 968 aa9.45□□□□□ -0.9
NIN-204ENST00000382043 CYB5RLQ6IPT4 315 aa9.45□□□□□ -0.9
NIN-204ENST00000382043 RAB3GAP2Q9H2M9 1393 aa9.44□□□□□ -0.9
NIN-204ENST00000382043 SETD5Q9C0A6 1442 aa9.44□□□□□ -0.9
NIN-204ENST00000382043 EFCAB2Q5VUJ9 269 aa9.43□□□□□ -0.9
NIN-204ENST00000382043 FKBP8Q14318 412 aa9.43□□□□□ -0.9
NIN-204ENST00000382043 SYNJ1O43426 1573 aa9.42□□□□□ -0.9
NIN-204ENST00000382043 MPHOSPH9Q99550 1183 aa9.41□□□□□ -0.9
NIN-204ENST00000382043 PTPRGP23470 1445 aa9.4□□□□□ -0.9
NIN-204ENST00000382043 NUP155O75694 1391 aa9.4□□□□□ -0.91
NIN-204ENST00000382043 IRX6P78412 446 aaPredicted RBP9.39□□□□□ -0.91
NIN-204ENST00000382043 KIF3BO15066 747 aa9.39□□□□□ -0.91
NIN-204ENST00000382043 OSCARQ8IYS5 282 aa9.39□□□□□ -0.91
NIN-204ENST00000382043 SCAF1Q9H7N4 1312 aaKnown RBP9.39□□□□□ -0.91
NIN-204ENST00000382043 SAFB2Q14151 953 aaKnown RBP eCLIP9.38□□□□□ -0.91
NIN-204ENST00000382043 WDR43Q15061 677 aaKnown RBP eCLIP9.38□□□□□ -0.91
NIN-204ENST00000382043 C14orf37Q86TY3 774 aa9.38□□□□□ -0.91
NIN-204ENST00000382043 ZNF644Q9H582 1327 aaPredicted RBP9.37□□□□□ -0.91
NIN-204ENST00000382043 TNNT2P45379 298 aaPredicted RBP9.36□□□□□ -0.91
NIN-204ENST00000382043 CUX1P39880 1505 aa9.36□□□□□ -0.91
NIN-204ENST00000382043 ZBTB7CA1YPR0 619 aa9.36□□□□□ -0.91
NIN-204ENST00000382043 PPM1GO15355 546 aaPredicted RBP9.36□□□□□ -0.91
NIN-204ENST00000382043 HMGXB3Q12766 1538 aa9.35□□□□□ -0.91
NIN-204ENST00000382043 POLA1P09884 1462 aaPredicted RBP9.34□□□□□ -0.91
NIN-204ENST00000382043 POGKQ9P215 609 aa9.34□□□□□ -0.91
NIN-204ENST00000382043 SPAG9O60271 1321 aaKnown RBP9.34□□□□□ -0.91
NIN-204ENST00000382043 ANKRD30AQ9BXX3 1397 aa9.34□□□□□ -0.91
NIN-204ENST00000382043 TOPBP1Q92547 1522 aa9.34□□□□□ -0.91
NIN-204ENST00000382043 L3MBTL2Q969R5 705 aa9.34□□□□□ -0.91
NIN-204ENST00000382043 KNSTRNQ9Y448 316 aa9.34□□□□□ -0.91
NIN-204ENST00000382043 CCDC18Q5T9S5 1454 aa9.34□□□□□ -0.91
NIN-204ENST00000382043 HSPA5P11021 654 aaKnown RBP9.33□□□□□ -0.92
NIN-204ENST00000382043 CC2D1BQ5T0F9 858 aaKnown RBP9.33□□□□□ -0.92
NIN-204ENST00000382043 NUTM2DQ5VT03 806 aaPredicted RBP9.33□□□□□ -0.92
NIN-204ENST00000382043 STK26Q9P289 416 aa9.33□□□□□ -0.92
NIN-204ENST00000382043 ZBTB47Q9UFB7 747 aaPredicted RBP9.32□□□□□ -0.92
NIN-204ENST00000382043 KANK1Q14678 1352 aa9.32□□□□□ -0.92
NIN-204ENST00000382043 ARAP1Q96P48 1450 aa9.32□□□□□ -0.92
NIN-204ENST00000382043 KIF21BO75037 1637 aa9.31□□□□□ -0.92
NIN-204ENST00000382043 NEUROD2Q15784 382 aa9.31□□□□□ -0.92
NIN-204ENST00000382043 PHLDB1Q86UU1 1377 aa9.3□□□□□ -0.92
NIN-204ENST00000382043 GRIN2BQ13224 1484 aa9.3□□□□□ -0.92
NIN-204ENST00000382043 TIMELESSQ9UNS1 1208 aa9.3□□□□□ -0.92
NIN-204ENST00000382043 CDCA8Q53HL2 280 aa9.29□□□□□ -0.92
NIN-204ENST00000382043 LMOD2Q6P5Q4 547 aa9.29□□□□□ -0.92
NIN-204ENST00000382043 PRXQ9BXM0 1461 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms