RNA–Protein interactions for RNA: ENST00000381756.9

GGA1-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene GGA1, Length 2,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-204ENST00000381756 ARHGAP35Q9NRY4 1499 aa37.66■■■■□ 3.62
GGA1-204ENST00000381756 ANP32CO43423 234 aa37.59■■■■□ 3.61
GGA1-204ENST00000381756 KIF27Q86VH2 1401 aa37.59■■■■□ 3.61
GGA1-204ENST00000381756 MYT1LQ9UL68 1186 aa37.55■■■■□ 3.6
GGA1-204ENST00000381756 TIAM1Q13009 1591 aa37.55■■■■□ 3.6
GGA1-204ENST00000381756 MSH5O43196 834 aa37.51■■■■□ 3.59
GGA1-204ENST00000381756 ITGAEP38570 1179 aa37.46■■■■□ 3.59
GGA1-204ENST00000381756 TRIM52Q96A61 297 aa37.42■■■■□ 3.58
GGA1-204ENST00000381756 ERICH6BQ5W0A0 696 aa37.42■■■■□ 3.58
GGA1-204ENST00000381756 LRRC9Q6ZRR7 1453 aa37.38■■■■□ 3.58
GGA1-204ENST00000381756 CDK11AQ9UQ88 783 aaPredicted RBP37.38■■■■□ 3.57
GGA1-204ENST00000381756 SIN3AQ96ST3 1273 aa37.35■■■■□ 3.57
GGA1-204ENST00000381756 CUX1P39880 1505 aa37.35■■■■□ 3.57
GGA1-204ENST00000381756 PABPN1Q86U42 306 aaKnown RBP eCLIP37.32■■■■□ 3.562e-8■■□□□ 12.2
GGA1-204ENST00000381756 ERICH6Q7L0X2 663 aa37.3■■■■□ 3.56
GGA1-204ENST00000381756 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.28■■■■□ 3.56
GGA1-204ENST00000381756 PHLDB1Q86UU1 1377 aa37.25■■■■□ 3.55
GGA1-204ENST00000381756 CFAP43Q8NDM7 1665 aa37.22■■■■□ 3.55
GGA1-204ENST00000381756 FHAD1B1AJZ9 1412 aa37.19■■■■□ 3.54
GGA1-204ENST00000381756 TONSLQ96HA7 1378 aa37.08■■■■□ 3.53
GGA1-204ENST00000381756 FAM50AQ14320 339 aaKnown RBP37.06■■■■□ 3.52
GGA1-204ENST00000381756 PPP4R2Q9NY27 417 aa37.06■■■■□ 3.52
GGA1-204ENST00000381756 HMGXB3Q12766 1538 aa37.04■■■■□ 3.52
GGA1-204ENST00000381756 HNRNPUQ00839 825 aaKnown RBP eCLIP37.02■■■■□ 3.52
GGA1-204ENST00000381756 HIRIP3Q9BW71 556 aaPredicted RBP37.01■■■■□ 3.52
GGA1-204ENST00000381756 IGF1RP08069 1367 aa36.99■■■■□ 3.51
GGA1-204ENST00000381756 CFTRP13569 1480 aa36.95■■■■□ 3.51
GGA1-204ENST00000381756 PCF11O94913 1555 aaKnown RBP36.92■■■■□ 3.5
GGA1-204ENST00000381756 UACAQ9BZF9 1416 aa36.92■■■■□ 3.5
GGA1-204ENST00000381756 NCAPD3P42695 1498 aa36.9■■■■□ 3.5
GGA1-204ENST00000381756 FYCO1Q9BQS8 1478 aa36.88■■■■□ 3.49
GGA1-204ENST00000381756 AQRO60306 1485 aaKnown RBP eCLIP36.86■■■■□ 3.494e-7■■■■□ 26.1
GGA1-204ENST00000381756 CARMIL1Q5VZK9 1371 aa36.86■■■■□ 3.49
GGA1-204ENST00000381756 CCDC18Q5T9S5 1454 aa36.85■■■■□ 3.49
GGA1-204ENST00000381756 DEKP35659 375 aaKnown RBP36.85■■■■□ 3.49
GGA1-204ENST00000381756 HFM1A2PYH4 1435 aa36.84■■■■□ 3.49
GGA1-204ENST00000381756 KDM5BQ9UGL1 1544 aa36.79■■■■□ 3.48
GGA1-204ENST00000381756 NCOA2Q15596 1464 aa36.78■■■■□ 3.48
GGA1-204ENST00000381756 IRX6P78412 446 aaPredicted RBP36.78■■■■□ 3.48
GGA1-204ENST00000381756 PRDM2Q13029 1718 aa36.76■■■■□ 3.48
GGA1-204ENST00000381756 CASKIN1Q8WXD9 1431 aa36.76■■■■□ 3.48
GGA1-204ENST00000381756 FGD6Q6ZV73 1430 aa36.76■■■■□ 3.47
GGA1-204ENST00000381756 EFCAB5A4FU69 1503 aa36.76■■■■□ 3.47
GGA1-204ENST00000381756 FGD5Q6ZNL6 1462 aa36.75■■■■□ 3.47
GGA1-204ENST00000381756 PTPN23Q9H3S7 1636 aa36.73■■■■□ 3.47
GGA1-204ENST00000381756 NOP58Q9Y2X3 529 aaKnown RBP36.7■■■■□ 3.47
GGA1-204ENST00000381756 ZBED9Q6R2W3 1325 aa36.67■■■■□ 3.46
GGA1-204ENST00000381756 CNTLNQ9NXG0 1405 aa36.67■■■■□ 3.46
GGA1-204ENST00000381756 WASHC2AQ641Q2 1341 aa36.66■■■■□ 3.46
GGA1-204ENST00000381756 NAIPQ13075 1403 aa36.59■■■■□ 3.45
GGA1-204ENST00000381756 FMN1Q68DA7 1419 aa36.55■■■■□ 3.44
GGA1-204ENST00000381756 HSPA5P11021 654 aaKnown RBP36.55■■■■□ 3.44
GGA1-204ENST00000381756 PTPRKQ15262 1439 aa36.53■■■■□ 3.44
GGA1-204ENST00000381756 EIF4G2P78344 907 aaKnown RBP eCLIP36.52■■■■□ 3.44
GGA1-204ENST00000381756 B4GALNT3Q6L9W6 998 aa36.52■■■■□ 3.44
GGA1-204ENST00000381756 FHOD3Q2V2M9 1422 aa36.51■■■■□ 3.44
GGA1-204ENST00000381756 PRKRIP1Q9H875 184 aaPredicted RBP36.49■■■■□ 3.43
GGA1-204ENST00000381756 NCOA1Q15788 1441 aa36.46■■■■□ 3.43
GGA1-204ENST00000381756 PRKCSHP14314 528 aaPredicted RBP36.44■■■■□ 3.42
GGA1-204ENST00000381756 HECW1Q76N89 1606 aa36.42■■■■□ 3.42
GGA1-204ENST00000381756 ATP1B4Q9UN42 357 aaPredicted RBP36.41■■■■□ 3.42
GGA1-204ENST00000381756 MYOM3Q5VTT5 1437 aa36.4■■■■□ 3.42
GGA1-204ENST00000381756 SNAPC4Q5SXM2 1469 aa36.4■■■■□ 3.42
GGA1-204ENST00000381756 SMG6Q86US8 1419 aaKnown RBP36.39■■■■□ 3.42
GGA1-204ENST00000381756 CCDC7Q96M83 1385 aa36.39■■■■□ 3.42
GGA1-204ENST00000381756 ANP32AP39687 249 aaKnown RBP36.37■■■■□ 3.41
GGA1-204ENST00000381756 CCDC184Q52MB2 194 aa36.37■■■■□ 3.41
GGA1-204ENST00000381756 IPO9Q96P70 1041 aaKnown RBP36.37■■■■□ 3.41
GGA1-204ENST00000381756 MTUS2Q5JR59 1369 aa36.37■■■■□ 3.41
GGA1-204ENST00000381756 MRS2Q9HD23 443 aa36.37■■■■□ 3.41
GGA1-204ENST00000381756 P3H3Q8IVL6 736 aa36.35■■■■□ 3.41
GGA1-204ENST00000381756 AKNAQ7Z591 1439 aa36.35■■■■□ 3.41
GGA1-204ENST00000381756 PAK3O75914 559 aaPredicted RBP36.35■■■■□ 3.41
GGA1-204ENST00000381756 RNF123Q5XPI4 1314 aa36.34■■■■□ 3.41
GGA1-204ENST00000381756 ABCA5Q8WWZ7 1642 aa36.34■■■■□ 3.41
GGA1-204ENST00000381756 THOC2Q8NI27 1593 aaKnown RBP36.33■■■■□ 3.41
GGA1-204ENST00000381756 GCC2Q8IWJ2 1684 aa36.32■■■■□ 3.41
GGA1-204ENST00000381756 CTTNBP2Q8WZ74 1663 aa36.32■■■■□ 3.4
GGA1-204ENST00000381756 CC2D2AQ9P2K1 1620 aa36.32■■■■□ 3.4
GGA1-204ENST00000381756 FAM9BQ8IZU0 186 aa36.31■■■■□ 3.4
GGA1-204ENST00000381756 NBR1Q14596 966 aa36.3■■■■□ 3.4
GGA1-204ENST00000381756 RTL5Q5HYW3 569 aaPredicted RBP36.3■■■■□ 3.4
GGA1-204ENST00000381756 CUL7Q14999 1698 aa36.28■■■■□ 3.4
GGA1-204ENST00000381756 POLR1AO95602 1720 aaPredicted RBP36.28■■■■□ 3.4
GGA1-204ENST00000381756 SUPT6HQ7KZ85 1726 aaKnown RBP36.28■■■■□ 3.4
GGA1-204ENST00000381756 EHBP1L1Q8N3D4 1523 aa36.25■■■■□ 3.39
GGA1-204ENST00000381756 DENND4BO75064 1496 aaPredicted RBP36.24■■■■□ 3.39
GGA1-204ENST00000381756 CADPSQ9ULU8 1353 aa36.23■■■■□ 3.39
GGA1-204ENST00000381756 ZBTB47Q9UFB7 747 aaPredicted RBP36.22■■■■□ 3.39
GGA1-204ENST00000381756 TCOF1Q13428 1488 aaKnown RBP36.2■■■■□ 3.39
GGA1-204ENST00000381756 ARHGEF11O15085 1522 aa36.19■■■■□ 3.38
GGA1-204ENST00000381756 NUDCQ9Y266 331 aa36.19■■■■□ 3.38
GGA1-204ENST00000381756 ABCA10Q8WWZ4 1543 aa36.18■■■■□ 3.38
GGA1-204ENST00000381756 UGGT2Q9NYU1 1516 aa36.16■■■■□ 3.38
GGA1-204ENST00000381756 CCDC136Q96JN2 1154 aa36.16■■■■□ 3.38
GGA1-204ENST00000381756 GRIN2BQ13224 1484 aa36.14■■■■□ 3.38
GGA1-204ENST00000381756 C11orf95C9JLR9 678 aaPredicted RBP36.14■■■■□ 3.38
GGA1-204ENST00000381756 SAMD9Q5K651 1589 aa36.14■■■■□ 3.38
GGA1-204ENST00000381756 SPATA31E1Q6ZUB1 1445 aa36.12■■■■□ 3.37
GGA1-204ENST00000381756 LRRIQ1Q96JM4 1722 aa36.09■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms