RNA–Protein interactions for RNA: ENST00000381736.7

NUP58-202, Transcript of nucleoporin 58, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUP58, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-202ENST00000381736 IFT140Q96RY7 1462 aa16.46■□□□□ 0.23
NUP58-202ENST00000381736 TRIM52Q96A61 297 aa16.46■□□□□ 0.22
NUP58-202ENST00000381736 BIVM-ERCC5R4GMW8 1640 aa16.44■□□□□ 0.22
NUP58-202ENST00000381736 GRIN2BQ13224 1484 aa16.44■□□□□ 0.22
NUP58-202ENST00000381736 KIF21BO75037 1637 aa16.44■□□□□ 0.22
NUP58-202ENST00000381736 PRXQ9BXM0 1461 aa16.44■□□□□ 0.22
NUP58-202ENST00000381736 FHOD3Q2V2M9 1422 aa16.43■□□□□ 0.22
NUP58-202ENST00000381736 ABCA10Q8WWZ4 1543 aa16.43■□□□□ 0.22
NUP58-202ENST00000381736 PLEKHD1A6NEE1 506 aa16.43■□□□□ 0.22
NUP58-202ENST00000381736 JPH4Q96JJ6 628 aa16.41■□□□□ 0.22
NUP58-202ENST00000381736 CARMIL2Q6F5E8 1435 aa16.41■□□□□ 0.22
NUP58-202ENST00000381736 ERICH3Q5RHP9 1530 aa16.4■□□□□ 0.22
NUP58-202ENST00000381736 FMN1Q68DA7 1419 aa16.4■□□□□ 0.22
NUP58-202ENST00000381736 KANK4Q5T7N3 995 aaPredicted RBP16.39■□□□□ 0.21
NUP58-202ENST00000381736 KCNH8Q96L42 1107 aa16.37■□□□□ 0.21
NUP58-202ENST00000381736 CHIC2Q9UKJ5 165 aa16.36■□□□□ 0.21
NUP58-202ENST00000381736 NEUROD1Q13562 356 aa16.32■□□□□ 0.2
NUP58-202ENST00000381736 SNAPC4Q5SXM2 1469 aa16.3■□□□□ 0.2
NUP58-202ENST00000381736 KIF21AQ7Z4S6 1674 aa16.29■□□□□ 0.2
NUP58-202ENST00000381736 ZNF608Q9ULD9 1512 aaPredicted RBP16.28■□□□□ 0.2
NUP58-202ENST00000381736 CFDP1Q9UEE9 299 aaPredicted RBP16.28■□□□□ 0.2
NUP58-202ENST00000381736 PRDM2Q13029 1718 aa16.26■□□□□ 0.19
NUP58-202ENST00000381736 CENPBP07199 599 aaPredicted RBP16.25■□□□□ 0.19
NUP58-202ENST00000381736 TSPY4P0CV99 314 aa16.25■□□□□ 0.19
NUP58-202ENST00000381736 TSPY10P0CW01 314 aa16.25■□□□□ 0.19
NUP58-202ENST00000381736 CCNB3Q8WWL7 1395 aa16.24■□□□□ 0.19
NUP58-202ENST00000381736 ARHGAP35Q9NRY4 1499 aa16.23■□□□□ 0.19
NUP58-202ENST00000381736 ARAP1Q96P48 1450 aa16.23■□□□□ 0.19
NUP58-202ENST00000381736 OSCARQ8IYS5 282 aa16.22■□□□□ 0.19
NUP58-202ENST00000381736 RRP7BPQ9NSQ0 103 aa16.21■□□□□ 0.19
NUP58-202ENST00000381736 CUL7Q14999 1698 aa16.19■□□□□ 0.18
NUP58-202ENST00000381736 PTPRGP23470 1445 aa16.19■□□□□ 0.18
NUP58-202ENST00000381736 MYT1Q01538 1121 aa16.17■□□□□ 0.18
NUP58-202ENST00000381736 MAGI1Q96QZ7 1491 aaPredicted RBP16.14■□□□□ 0.17
NUP58-202ENST00000381736 SYNJ2O15056 1496 aa16.13■□□□□ 0.17
NUP58-202ENST00000381736 WDR62O43379 1518 aa16.12■□□□□ 0.17
NUP58-202ENST00000381736 KIAA0586Q9BVV6 1533 aa16.11■□□□□ 0.17
NUP58-202ENST00000381736 EFCAB5A4FU69 1503 aa16.11■□□□□ 0.17
NUP58-202ENST00000381736 GRIN2AQ12879 1464 aa16.11■□□□□ 0.17
NUP58-202ENST00000381736 PRG4Q92954 1404 aaPredicted RBP16.09■□□□□ 0.17
NUP58-202ENST00000381736 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.09■□□□□ 0.172e-6■■□□□ 12.4
NUP58-202ENST00000381736 CASKIN1Q8WXD9 1431 aa16.09■□□□□ 0.17
NUP58-202ENST00000381736 ZNF326Q5BKZ1 582 aaKnown RBP16.08■□□□□ 0.16
NUP58-202ENST00000381736 CCDC18Q5T9S5 1454 aa16.08■□□□□ 0.16
NUP58-202ENST00000381736 IQGAP2Q13576 1575 aa16.07■□□□□ 0.16
NUP58-202ENST00000381736 POLR3GLQ9BT43 218 aa16.06■□□□□ 0.16
NUP58-202ENST00000381736 FYCO1Q9BQS8 1478 aa16.03■□□□□ 0.16
NUP58-202ENST00000381736 SLC4A1APQ9BWU0 796 aaKnown RBP16.02■□□□□ 0.15
NUP58-202ENST00000381736 LRRC9Q6ZRR7 1453 aa16.02■□□□□ 0.15
NUP58-202ENST00000381736 TONSLQ96HA7 1378 aa16.01■□□□□ 0.15
NUP58-202ENST00000381736 CYB5RLQ6IPT4 315 aa16.01■□□□□ 0.15
NUP58-202ENST00000381736 EIF4G3O43432 1585 aaKnown RBP15.99■□□□□ 0.15
NUP58-202ENST00000381736 EFCAB2Q5VUJ9 269 aa15.97■□□□□ 0.15
NUP58-202ENST00000381736 DIEXFQ68CQ4 756 aaKnown RBP15.97■□□□□ 0.15
NUP58-202ENST00000381736 ABCA5Q8WWZ7 1642 aa15.96■□□□□ 0.15
NUP58-202ENST00000381736 SETD5Q9C0A6 1442 aa15.96■□□□□ 0.15
NUP58-202ENST00000381736 TARBP1Q13395 1621 aaKnown RBP15.96■□□□□ 0.15
NUP58-202ENST00000381736 PHLDB1Q86UU1 1377 aa15.96■□□□□ 0.15
NUP58-202ENST00000381736 ADAMTS12P58397 1594 aa15.95■□□□□ 0.14
NUP58-202ENST00000381736 ZNF316A6NFI3 1004 aaPredicted RBP15.95■□□□□ 0.14
NUP58-202ENST00000381736 HNRNPMP52272 730 aaKnown RBP eCLIP15.93■□□□□ 0.14
NUP58-202ENST00000381736 YTHDC1Q96MU7 727 aaKnown RBP15.93■□□□□ 0.14
NUP58-202ENST00000381736 ACIN1Q9UKV3 1341 aaKnown RBP15.92■□□□□ 0.14
NUP58-202ENST00000381736 ESF1Q9H501 851 aaKnown RBP15.92■□□□□ 0.14
NUP58-202ENST00000381736 RAB3GAP2Q9H2M9 1393 aa15.92■□□□□ 0.14
NUP58-202ENST00000381736 TIAM1Q13009 1591 aa15.91■□□□□ 0.14
NUP58-202ENST00000381736 NCOA2Q15596 1464 aa15.9■□□□□ 0.14
NUP58-202ENST00000381736 PCF11O94913 1555 aaKnown RBP15.9■□□□□ 0.14
NUP58-202ENST00000381736 MYOM3Q5VTT5 1437 aa15.89■□□□□ 0.14
NUP58-202ENST00000381736 FGD6Q6ZV73 1430 aa15.89■□□□□ 0.14
NUP58-202ENST00000381736 PBRM1Q86U86 1689 aa15.89■□□□□ 0.13
NUP58-202ENST00000381736 CNGB1Q14028 1251 aaPredicted RBP15.88■□□□□ 0.13
NUP58-202ENST00000381736 HECW1Q76N89 1606 aa15.88■□□□□ 0.13
NUP58-202ENST00000381736 CHGAP10645 457 aaKnown RBP15.88■□□□□ 0.13
NUP58-202ENST00000381736 SIN3AQ96ST3 1273 aa15.87■□□□□ 0.13
NUP58-202ENST00000381736 PLB1Q6P1J6 1458 aa15.87■□□□□ 0.13
NUP58-202ENST00000381736 ZNF644Q9H582 1327 aaPredicted RBP15.87■□□□□ 0.13
NUP58-202ENST00000381736 EPRSP07814 1512 aaKnown RBP15.87■□□□□ 0.13
NUP58-202ENST00000381736 CTTNBP2Q8WZ74 1663 aa15.86■□□□□ 0.13
NUP58-202ENST00000381736 THOC2Q8NI27 1593 aaKnown RBP15.86■□□□□ 0.13
NUP58-202ENST00000381736 CDK13Q14004 1512 aaKnown RBP15.86■□□□□ 0.13
NUP58-202ENST00000381736 CLSPNQ9HAW4 1339 aa15.86■□□□□ 0.13
NUP58-202ENST00000381736 ANKRD30AQ9BXX3 1397 aa15.85■□□□□ 0.13
NUP58-202ENST00000381736 TRHP20396 242 aaPredicted RBP15.84■□□□□ 0.13
NUP58-202ENST00000381736 RSPH4AQ5TD94 716 aa15.84■□□□□ 0.13
NUP58-202ENST00000381736 UACAQ9BZF9 1416 aa15.83■□□□□ 0.13
NUP58-202ENST00000381736 WDR97A6NE52 1622 aa15.82■□□□□ 0.12
NUP58-202ENST00000381736 EHBP1L1Q8N3D4 1523 aa15.82■□□□□ 0.12
NUP58-202ENST00000381736 TROQ12816 1431 aaPredicted RBP15.82■□□□□ 0.12
NUP58-202ENST00000381736 KDM2AQ9Y2K7 1162 aa15.82■□□□□ 0.12
NUP58-202ENST00000381736 RRBP1Q9P2E9 1410 aaKnown RBP15.81■□□□□ 0.12
NUP58-202ENST00000381736 PLPPR3Q6T4P5 718 aa15.8■□□□□ 0.12
NUP58-202ENST00000381736 NUP160Q12769 1436 aa15.79■□□□□ 0.12
NUP58-202ENST00000381736 SPAG9O60271 1321 aaKnown RBP15.79■□□□□ 0.12
NUP58-202ENST00000381736 UGGT2Q9NYU1 1516 aa15.79■□□□□ 0.12
NUP58-202ENST00000381736 STAG3Q9UJ98 1225 aa15.79■□□□□ 0.12
NUP58-202ENST00000381736 ERICH6Q7L0X2 663 aa15.78■□□□□ 0.12
NUP58-202ENST00000381736 FOXD1Q16676 465 aa15.77■□□□□ 0.12
NUP58-202ENST00000381736 MAP3K1Q13233 1512 aa15.77■□□□□ 0.12
NUP58-202ENST00000381736 RGL3Q3MIN7 710 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms