RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 JPH4Q96JJ6 628 aa25.34■■□□□ 1.65
PDGFB-202ENST00000381551 EHMT2Q96KQ7 1210 aa25.34■■□□□ 1.65
PDGFB-202ENST00000381551 GOLGA3Q08378 1498 aa25.31■■□□□ 1.64
PDGFB-202ENST00000381551 UBTFP17480 764 aaKnown RBP25.29■■□□□ 1.64
PDGFB-202ENST00000381551 SHROOM2Q13796 1616 aa25.24■■□□□ 1.63
PDGFB-202ENST00000381551 IQGAP2Q13576 1575 aa25.24■■□□□ 1.63
PDGFB-202ENST00000381551 CTTNBP2Q8WZ74 1663 aa25.22■■□□□ 1.63
PDGFB-202ENST00000381551 LOC105371045A0A1W2PR82 267 aa25.2■■□□□ 1.62
PDGFB-202ENST00000381551 PRG4Q92954 1404 aaPredicted RBP25.2■■□□□ 1.62
PDGFB-202ENST00000381551 ARHGEF11O15085 1522 aa25.17■■□□□ 1.62
PDGFB-202ENST00000381551 UGGT2Q9NYU1 1516 aa25.15■■□□□ 1.62
PDGFB-202ENST00000381551 ERCC6L2Q5T890 1561 aa25.14■■□□□ 1.61
PDGFB-202ENST00000381551 RIMBP3CA6NJZ7 1639 aa25.12■■□□□ 1.61
PDGFB-202ENST00000381551 RIMBP3BA6NNM3 1639 aa25.12■■□□□ 1.61
PDGFB-202ENST00000381551 RIMBP3Q9UFD9 1639 aa25.12■■□□□ 1.61
PDGFB-202ENST00000381551 TNIKQ9UKE5 1360 aa25.11■■□□□ 1.61
PDGFB-202ENST00000381551 RANGAP1P46060 587 aaPredicted RBP25.09■■□□□ 1.61
PDGFB-202ENST00000381551 CARMIL2Q6F5E8 1435 aa25.09■■□□□ 1.61
PDGFB-202ENST00000381551 DISP1Q96F81 1524 aa25.08■■□□□ 1.61
PDGFB-202ENST00000381551 CYB5RLQ6IPT4 315 aa25.02■■□□□ 1.6
PDGFB-202ENST00000381551 P3H3Q8IVL6 736 aa25.01■■□□□ 1.59
PDGFB-202ENST00000381551 ARAP1Q96P48 1450 aa25■■□□□ 1.59
PDGFB-202ENST00000381551 KIAA0556O60303 1618 aa24.99■■□□□ 1.59
PDGFB-202ENST00000381551 SAMD9Q5K651 1589 aa24.97■■□□□ 1.59
PDGFB-202ENST00000381551 PTPRGP23470 1445 aa24.96■■□□□ 1.59
PDGFB-202ENST00000381551 TTBK1Q5TCY1 1321 aaPredicted RBP24.94■■□□□ 1.58
PDGFB-202ENST00000381551 EFCAB5A4FU69 1503 aa24.92■■□□□ 1.58
PDGFB-202ENST00000381551 ARHGAP35Q9NRY4 1499 aa24.91■■□□□ 1.58
PDGFB-202ENST00000381551 CLIP1P30622 1438 aa24.89■■□□□ 1.58
PDGFB-202ENST00000381551 FHOD3Q2V2M9 1422 aa24.87■■□□□ 1.57
PDGFB-202ENST00000381551 CEP162Q5TB80 1403 aa24.86■■□□□ 1.57
PDGFB-202ENST00000381551 UACAQ9BZF9 1416 aa24.78■■□□□ 1.56
PDGFB-202ENST00000381551 PLB1Q6P1J6 1458 aa24.76■■□□□ 1.55
PDGFB-202ENST00000381551 UHRF1BP1LA0JNW5 1464 aa24.74■■□□□ 1.55
PDGFB-202ENST00000381551 FMN1Q68DA7 1419 aa24.73■■□□□ 1.55
PDGFB-202ENST00000381551 ABCA8O94911 1581 aa24.72■■□□□ 1.55
PDGFB-202ENST00000381551 ADCY10Q96PN6 1610 aa24.71■■□□□ 1.55
PDGFB-202ENST00000381551 ABCC2Q92887 1545 aa24.7■■□□□ 1.54
PDGFB-202ENST00000381551 NPM1P06748 294 aaKnown RBP eCLIP24.68■■□□□ 1.54
PDGFB-202ENST00000381551 RAPGEF6Q8TEU7 1601 aa24.64■■□□□ 1.54
PDGFB-202ENST00000381551 KDM5BQ9UGL1 1544 aa24.61■■□□□ 1.53
PDGFB-202ENST00000381551 ATP1B4Q9UN42 357 aaPredicted RBP24.61■■□□□ 1.53
PDGFB-202ENST00000381551 NUP153P49790 1475 aaKnown RBP24.6■■□□□ 1.53
PDGFB-202ENST00000381551 CASKIN1Q8WXD9 1431 aa24.6■■□□□ 1.53
PDGFB-202ENST00000381551 ARID3CA6NKF2 412 aa24.59■■□□□ 1.53
PDGFB-202ENST00000381551 ATP10BO94823 1461 aa24.58■■□□□ 1.52
PDGFB-202ENST00000381551 VPS8Q8N3P4 1428 aa24.54■■□□□ 1.52
PDGFB-202ENST00000381551 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.52■■□□□ 1.52
PDGFB-202ENST00000381551 HNRNPUL2Q1KMD3 747 aaKnown RBP24.52■■□□□ 1.52
PDGFB-202ENST00000381551 ZCCHC11Q5TAX3 1644 aaKnown RBP24.52■■□□□ 1.52
PDGFB-202ENST00000381551 PCF11O94913 1555 aaKnown RBP24.51■■□□□ 1.51
PDGFB-202ENST00000381551 FYCO1Q9BQS8 1478 aa24.51■■□□□ 1.51
PDGFB-202ENST00000381551 HECW1Q76N89 1606 aa24.5■■□□□ 1.51
PDGFB-202ENST00000381551 EPRSP07814 1512 aaKnown RBP24.5■■□□□ 1.51
PDGFB-202ENST00000381551 MAPKBP1O60336 1514 aa24.48■■□□□ 1.51
PDGFB-202ENST00000381551 ASXL2Q76L83 1435 aa24.46■■□□□ 1.51
PDGFB-202ENST00000381551 PLEKHD1A6NEE1 506 aa24.44■■□□□ 1.5
PDGFB-202ENST00000381551 CDK13Q14004 1512 aaKnown RBP24.44■■□□□ 1.5
PDGFB-202ENST00000381551 LRRIQ1Q96JM4 1722 aa24.43■■□□□ 1.5
PDGFB-202ENST00000381551 CCDC18Q5T9S5 1454 aa24.41■■□□□ 1.5
PDGFB-202ENST00000381551 CDK11AQ9UQ88 783 aaPredicted RBP24.41■■□□□ 1.5
PDGFB-202ENST00000381551 KCNH8Q96L42 1107 aa24.38■■□□□ 1.49
PDGFB-202ENST00000381551 WDR7Q9Y4E6 1490 aa24.38■■□□□ 1.49
PDGFB-202ENST00000381551 TRHP20396 242 aaPredicted RBP24.36■■□□□ 1.49
PDGFB-202ENST00000381551 ABCC10Q5T3U5 1492 aa24.35■■□□□ 1.49
PDGFB-202ENST00000381551 FAM69CQ0P6D2 419 aa24.33■■□□□ 1.49
PDGFB-202ENST00000381551 APLP2Q06481 763 aa24.3■■□□□ 1.48
PDGFB-202ENST00000381551 MAP3K1Q13233 1512 aa24.29■■□□□ 1.48
PDGFB-202ENST00000381551 TROQ12816 1431 aaPredicted RBP24.28■■□□□ 1.48
PDGFB-202ENST00000381551 MAGI3Q5TCQ9 1506 aa24.27■■□□□ 1.48
PDGFB-202ENST00000381551 DIP2BQ9P265 1576 aa24.27■■□□□ 1.48
PDGFB-202ENST00000381551 TIAM1Q13009 1591 aa24.26■■□□□ 1.47
PDGFB-202ENST00000381551 GLI2P10070 1586 aa24.25■■□□□ 1.47
PDGFB-202ENST00000381551 KIF13AQ9H1H9 1805 aa24.24■■□□□ 1.47
PDGFB-202ENST00000381551 KANK4Q5T7N3 995 aaPredicted RBP24.24■■□□□ 1.47
PDGFB-202ENST00000381551 MTUS2Q5JR59 1369 aa24.23■■□□□ 1.47
PDGFB-202ENST00000381551 CFAP43Q8NDM7 1665 aa24.22■■□□□ 1.47
PDGFB-202ENST00000381551 LRRC9Q6ZRR7 1453 aa24.19■■□□□ 1.46
PDGFB-202ENST00000381551 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.16■■□□□ 1.46
PDGFB-202ENST00000381551 ABCA9Q8IUA7 1624 aa24.16■■□□□ 1.46
PDGFB-202ENST00000381551 CD109Q6YHK3 1445 aa24.16■■□□□ 1.46
PDGFB-202ENST00000381551 KIF14Q15058 1648 aa24.15■■□□□ 1.46
PDGFB-202ENST00000381551 EHBP1L1Q8N3D4 1523 aa24.15■■□□□ 1.46
PDGFB-202ENST00000381551 MAP3K4Q9Y6R4 1608 aa24.13■■□□□ 1.45
PDGFB-202ENST00000381551 AEBP2Q6ZN18 517 aaPredicted RBP24.1■■□□□ 1.45
PDGFB-202ENST00000381551 TTC37Q6PGP7 1564 aa24.09■■□□□ 1.45
PDGFB-202ENST00000381551 PLCH2O75038 1416 aa24.07■■□□□ 1.44
PDGFB-202ENST00000381551 TSPOAP1O95153 1857 aa24.06■■□□□ 1.44
PDGFB-202ENST00000381551 NCOA2Q15596 1464 aa24.06■■□□□ 1.44
PDGFB-202ENST00000381551 PPARGC1BQ86YN6 1023 aaKnown RBP24.05■■□□□ 1.44
PDGFB-202ENST00000381551 SUPT6HQ7KZ85 1726 aaKnown RBP24.04■■□□□ 1.44
PDGFB-202ENST00000381551 CCNB3Q8WWL7 1395 aa24.03■■□□□ 1.44
PDGFB-202ENST00000381551 PPRC1Q5VV67 1664 aaKnown RBP24.03■■□□□ 1.44
PDGFB-202ENST00000381551 GPATCH8Q9UKJ3 1502 aaKnown RBP24.03■■□□□ 1.44
PDGFB-202ENST00000381551 EFCAB2Q5VUJ9 269 aa24■■□□□ 1.43
PDGFB-202ENST00000381551 TEX14Q8IWB6 1497 aa24■■□□□ 1.43
PDGFB-202ENST00000381551 MYO5CQ9NQX4 1742 aa23.98■■□□□ 1.43
PDGFB-202ENST00000381551 ARAP3Q8WWN8 1544 aa23.98■■□□□ 1.43
PDGFB-202ENST00000381551 CFDP1Q9UEE9 299 aaPredicted RBP23.97■■□□□ 1.43
PDGFB-202ENST00000381551 CDC42BPAQ5VT25 1732 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms