RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 CFAP44Q96MT7 982 aa6.52□□□□□ -1.37
PTPRD-203ENST00000381196 KIF21AQ7Z4S6 1674 aa6.5□□□□□ -1.37
PTPRD-203ENST00000381196 CCER2I3L3R5 266 aa6.5□□□□□ -1.37
PTPRD-203ENST00000381196 CHGAP10645 457 aaKnown RBP6.5□□□□□ -1.37
PTPRD-203ENST00000381196 LAS1LQ9Y4W2 734 aaKnown RBP6.5□□□□□ -1.37
PTPRD-203ENST00000381196 SCAF1Q9H7N4 1312 aaKnown RBP6.49□□□□□ -1.37
PTPRD-203ENST00000381196 A0A0G2JS52 829 aa6.49□□□□□ -1.37
PTPRD-203ENST00000381196 UPF2Q9HAU5 1272 aaKnown RBP6.49□□□□□ -1.37
PTPRD-203ENST00000381196 RSPH6AQ9H0K4 717 aa6.49□□□□□ -1.37
PTPRD-203ENST00000381196 MROH2BQ7Z745 1585 aa6.49□□□□□ -1.37
PTPRD-203ENST00000381196 VPS8Q8N3P4 1428 aa6.49□□□□□ -1.37
PTPRD-203ENST00000381196 C14orf37Q86TY3 774 aa6.48□□□□□ -1.37
PTPRD-203ENST00000381196 L1TD1Q5T7N2 865 aaKnown RBP6.48□□□□□ -1.37
PTPRD-203ENST00000381196 CHMP7Q8WUX9 453 aaPredicted RBP6.48□□□□□ -1.37
PTPRD-203ENST00000381196 TRHP20396 242 aaPredicted RBP6.47□□□□□ -1.37
PTPRD-203ENST00000381196 BECN1Q14457 450 aa6.47□□□□□ -1.37
PTPRD-203ENST00000381196 FHAD1B1AJZ9 1412 aa6.47□□□□□ -1.37
PTPRD-203ENST00000381196 LOC105371045A0A1W2PR82 267 aa6.47□□□□□ -1.37
PTPRD-203ENST00000381196 P3H3Q8IVL6 736 aa6.47□□□□□ -1.37
PTPRD-203ENST00000381196 MTERF4Q7Z6M4 381 aaKnown RBP6.46□□□□□ -1.38
PTPRD-203ENST00000381196 TOP2BQ02880 1626 aa6.46□□□□□ -1.38
PTPRD-203ENST00000381196 PHLDB1Q86UU1 1377 aa6.46□□□□□ -1.38
PTPRD-203ENST00000381196 BIVM-ERCC5R4GMW8 1640 aa6.45□□□□□ -1.38
PTPRD-203ENST00000381196 FANCIQ9NVI1 1328 aa6.45□□□□□ -1.38
PTPRD-203ENST00000381196 HMGXB3Q12766 1538 aa6.45□□□□□ -1.38
PTPRD-203ENST00000381196 NPM2Q86SE8 214 aaKnown RBP6.45□□□□□ -1.38
PTPRD-203ENST00000381196 PPP1R15AO75807 674 aaPredicted RBP6.45□□□□□ -1.38
PTPRD-203ENST00000381196 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.44□□□□□ -1.38
PTPRD-203ENST00000381196 HAP1P54257 671 aaPredicted RBP6.44□□□□□ -1.38
PTPRD-203ENST00000381196 KTN1Q86UP2 1357 aaKnown RBP6.44□□□□□ -1.38
PTPRD-203ENST00000381196 CANXP27824 592 aaKnown RBP6.43□□□□□ -1.38
PTPRD-203ENST00000381196 CHMP4BQ9H444 224 aaKnown RBP6.42□□□□□ -1.38
PTPRD-203ENST00000381196 CCDC88BA6NC98 1476 aa6.42□□□□□ -1.38
PTPRD-203ENST00000381196 CSRNP3Q8WYN3 585 aa6.42□□□□□ -1.38
PTPRD-203ENST00000381196 ERCC6Q03468 1493 aa6.42□□□□□ -1.38
PTPRD-203ENST00000381196 ROCK2O75116 1388 aaKnown RBP6.42□□□□□ -1.38
PTPRD-203ENST00000381196 ISY1Q9ULR0 285 aaKnown RBP6.42□□□□□ -1.38
PTPRD-203ENST00000381196 KIF27Q86VH2 1401 aa6.41□□□□□ -1.38
PTPRD-203ENST00000381196 CDK11BP21127 795 aaKnown RBP6.41□□□□□ -1.38
PTPRD-203ENST00000381196 BCL11AQ9H165 835 aa6.41□□□□□ -1.38
PTPRD-203ENST00000381196 CUX1P39880 1505 aa6.41□□□□□ -1.38
PTPRD-203ENST00000381196 MAP3K1Q13233 1512 aa6.41□□□□□ -1.38
PTPRD-203ENST00000381196 AAMPQ13685 434 aa6.41□□□□□ -1.38
PTPRD-203ENST00000381196 MAP7D2Q96T17 732 aa6.4□□□□□ -1.38
PTPRD-203ENST00000381196 CFAP43Q8NDM7 1665 aa6.4□□□□□ -1.38
PTPRD-203ENST00000381196 TONSLQ96HA7 1378 aa6.4□□□□□ -1.39
PTPRD-203ENST00000381196 EFCAB5A4FU69 1503 aa6.4□□□□□ -1.39
PTPRD-203ENST00000381196 IL27Q8NEV9 243 aa6.39□□□□□ -1.39
PTPRD-203ENST00000381196 GOLGA6L22H0YM25 854 aa6.39□□□□□ -1.39
PTPRD-203ENST00000381196 ABCC8Q09428 1581 aa6.39□□□□□ -1.39
PTPRD-203ENST00000381196 CUL7Q14999 1698 aa6.38□□□□□ -1.39
PTPRD-203ENST00000381196 TAF3Q5VWG9 929 aa6.38□□□□□ -1.39
PTPRD-203ENST00000381196 PPP4R2Q9NY27 417 aa6.38□□□□□ -1.39
PTPRD-203ENST00000381196 CCDC18Q5T9S5 1454 aa6.37□□□□□ -1.39
PTPRD-203ENST00000381196 ZBTB7CA1YPR0 619 aa6.37□□□□□ -1.39
PTPRD-203ENST00000381196 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.37□□□□□ -1.39
PTPRD-203ENST00000381196 NGEFQ8N5V2 710 aa6.37□□□□□ -1.39
PTPRD-203ENST00000381196 CECR2Q9BXF3 1484 aa6.37□□□□□ -1.39
PTPRD-203ENST00000381196 THOC2Q8NI27 1593 aaKnown RBP6.37□□□□□ -1.39
PTPRD-203ENST00000381196 NOP58Q9Y2X3 529 aaKnown RBP6.36□□□□□ -1.39
PTPRD-203ENST00000381196 CCDC144AA2RUR9 1427 aa6.36□□□□□ -1.39
PTPRD-203ENST00000381196 MS4A1P11836 297 aa6.36□□□□□ -1.39
PTPRD-203ENST00000381196 KCNH8Q96L42 1107 aa6.36□□□□□ -1.39
PTPRD-203ENST00000381196 CC2D2AQ9P2K1 1620 aa6.35□□□□□ -1.39
PTPRD-203ENST00000381196 EIF3AQ14152 1382 aaKnown RBP6.35□□□□□ -1.39
PTPRD-203ENST00000381196 SCAPERQ9BY12 1400 aa6.35□□□□□ -1.39
PTPRD-203ENST00000381196 PLEKHG5O94827 1062 aa6.35□□□□□ -1.39
PTPRD-203ENST00000381196 TSPY4P0CV99 314 aa6.35□□□□□ -1.39
PTPRD-203ENST00000381196 TSPY10P0CW01 314 aa6.35□□□□□ -1.39
PTPRD-203ENST00000381196 AEBP2Q6ZN18 517 aaPredicted RBP6.34□□□□□ -1.39
PTPRD-203ENST00000381196 SYNJ1O43426 1573 aa6.34□□□□□ -1.39
PTPRD-203ENST00000381196 CTTNBP2Q8WZ74 1663 aa6.34□□□□□ -1.39
PTPRD-203ENST00000381196 PLEKHH2Q8IVE3 1493 aa6.34□□□□□ -1.39
PTPRD-203ENST00000381196 PNNQ9H307 717 aaKnown RBP6.33□□□□□ -1.4
PTPRD-203ENST00000381196 ARHGAP35Q9NRY4 1499 aa6.32□□□□□ -1.4
PTPRD-203ENST00000381196 CCNB3Q8WWL7 1395 aa6.32□□□□□ -1.4
PTPRD-203ENST00000381196 NINLQ9Y2I6 1382 aa6.32□□□□□ -1.4
PTPRD-203ENST00000381196 CUX2O14529 1486 aa6.32□□□□□ -1.4
PTPRD-203ENST00000381196 CALRP27797 417 aaKnown RBP6.32□□□□□ -1.4
PTPRD-203ENST00000381196 A0A0U1RQG5 324 aaPredicted RBP6.31□□□□□ -1.4
PTPRD-203ENST00000381196 FYCO1Q9BQS8 1478 aa6.31□□□□□ -1.4
PTPRD-203ENST00000381196 SUPT6HQ7KZ85 1726 aaKnown RBP6.31□□□□□ -1.4
PTPRD-203ENST00000381196 PLEKHD1A6NEE1 506 aa6.31□□□□□ -1.4
PTPRD-203ENST00000381196 TCERG1O14776 1098 aaKnown RBP6.3□□□□□ -1.4
PTPRD-203ENST00000381196 PKNOX2Q96KN3 472 aa6.3□□□□□ -1.4
PTPRD-203ENST00000381196 CHAF1AQ13111 956 aaPredicted RBP6.3□□□□□ -1.4
PTPRD-203ENST00000381196 FMN1Q68DA7 1419 aa6.3□□□□□ -1.4
PTPRD-203ENST00000381196 GOLGA6L6A8MZA4 724 aa6.3□□□□□ -1.4
PTPRD-203ENST00000381196 PDE3BQ13370 1112 aa6.3□□□□□ -1.4
PTPRD-203ENST00000381196 DHX8Q14562 1220 aaKnown RBP6.3□□□□□ -1.4
PTPRD-203ENST00000381196 TIAM1Q13009 1591 aa6.29□□□□□ -1.4
PTPRD-203ENST00000381196 HSP90AA1P07900 732 aaKnown RBP6.29□□□□□ -1.4
PTPRD-203ENST00000381196 CDCA8Q53HL2 280 aa6.29□□□□□ -1.4
PTPRD-203ENST00000381196 RRBP1Q9P2E9 1410 aaKnown RBP6.29□□□□□ -1.4
PTPRD-203ENST00000381196 NPHP1O15259 732 aa6.29□□□□□ -1.4
PTPRD-203ENST00000381196 NRDCO43847 1150 aa6.29□□□□□ -1.4
PTPRD-203ENST00000381196 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.29□□□□□ -1.4
PTPRD-203ENST00000381196 LMOD2Q6P5Q4 547 aa6.29□□□□□ -1.4
PTPRD-203ENST00000381196 AQRO60306 1485 aaKnown RBP eCLIP6.29□□□□□ -1.4
PTPRD-203ENST00000381196 SUPT16HQ9Y5B9 1047 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms