RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 SHROOM2Q13796 1616 aa32.33■■■□□ 2.77
GTF3A-201ENST00000381140 CSRNP3Q8WYN3 585 aa32.32■■■□□ 2.77
GTF3A-201ENST00000381140 KIAA0586Q9BVV6 1533 aa32.29■■■□□ 2.76
GTF3A-201ENST00000381140 PRXQ9BXM0 1461 aa32.28■■■□□ 2.76
GTF3A-201ENST00000381140 ERCC6L2Q5T890 1561 aa32.28■■■□□ 2.76
GTF3A-201ENST00000381140 ARAP1Q96P48 1450 aa32.27■■■□□ 2.76
GTF3A-201ENST00000381140 JPH4Q96JJ6 628 aa32.25■■■□□ 2.75
GTF3A-201ENST00000381140 CYB5RLQ6IPT4 315 aa32.24■■■□□ 2.75
GTF3A-201ENST00000381140 PRG4Q92954 1404 aaPredicted RBP32.21■■■□□ 2.75
GTF3A-201ENST00000381140 CTTNBP2Q8WZ74 1663 aa32.21■■■□□ 2.75
GTF3A-201ENST00000381140 IQGAP2Q13576 1575 aa32.2■■■□□ 2.74
GTF3A-201ENST00000381140 KIF21BO75037 1637 aa32.07■■■□□ 2.72
GTF3A-201ENST00000381140 EHMT2Q96KQ7 1210 aa32.05■■■□□ 2.72
GTF3A-201ENST00000381140 UGGT2Q9NYU1 1516 aa31.97■■■□□ 2.71
GTF3A-201ENST00000381140 CARMIL2Q6F5E8 1435 aa31.97■■■□□ 2.71
GTF3A-201ENST00000381140 TTBK1Q5TCY1 1321 aaPredicted RBP31.94■■■□□ 2.7
GTF3A-201ENST00000381140 DISP1Q96F81 1524 aa31.91■■■□□ 2.7
GTF3A-201ENST00000381140 KIAA0556O60303 1618 aa31.89■■■□□ 2.7
GTF3A-201ENST00000381140 GOLGA3Q08378 1498 aa31.89■■■□□ 2.69
GTF3A-201ENST00000381140 UBTFP17480 764 aaKnown RBP31.84■■■□□ 2.69
GTF3A-201ENST00000381140 RANGAP1P46060 587 aaPredicted RBP31.84■■■□□ 2.69
GTF3A-201ENST00000381140 TNIKQ9UKE5 1360 aa31.84■■■□□ 2.69
GTF3A-201ENST00000381140 PTPRGP23470 1445 aa31.83■■■□□ 2.69
GTF3A-201ENST00000381140 P3H3Q8IVL6 736 aa31.74■■■□□ 2.67
GTF3A-201ENST00000381140 ADCY10Q96PN6 1610 aa31.74■■■□□ 2.67
GTF3A-201ENST00000381140 SAMD9Q5K651 1589 aa31.7■■■□□ 2.67
GTF3A-201ENST00000381140 NPM1P06748 294 aaKnown RBP eCLIP31.61■■■□□ 2.65
GTF3A-201ENST00000381140 UACAQ9BZF9 1416 aa31.61■■■□□ 2.65
GTF3A-201ENST00000381140 TRHP20396 242 aaPredicted RBP31.59■■■□□ 2.65
GTF3A-201ENST00000381140 EFCAB5A4FU69 1503 aa31.58■■■□□ 2.65
GTF3A-201ENST00000381140 ABCC2Q92887 1545 aa31.56■■■□□ 2.64
GTF3A-201ENST00000381140 PLB1Q6P1J6 1458 aa31.56■■■□□ 2.64
GTF3A-201ENST00000381140 FHOD3Q2V2M9 1422 aa31.55■■■□□ 2.64
GTF3A-201ENST00000381140 UHRF1BP1LA0JNW5 1464 aa31.53■■■□□ 2.64
GTF3A-201ENST00000381140 ABCA8O94911 1581 aa31.5■■■□□ 2.63
GTF3A-201ENST00000381140 ZCCHC11Q5TAX3 1644 aaKnown RBP31.44■■■□□ 2.62
GTF3A-201ENST00000381140 ARHGAP35Q9NRY4 1499 aa31.44■■■□□ 2.62
GTF3A-201ENST00000381140 MAPKBP1O60336 1514 aa31.44■■■□□ 2.62
GTF3A-201ENST00000381140 RAPGEF6Q8TEU7 1601 aa31.42■■■□□ 2.62
GTF3A-201ENST00000381140 KDM5BQ9UGL1 1544 aa31.4■■■□□ 2.62
GTF3A-201ENST00000381140 LOC105371045A0A1W2PR82 267 aa31.39■■■□□ 2.62
GTF3A-201ENST00000381140 ARID3CA6NKF2 412 aa31.39■■■□□ 2.62
GTF3A-201ENST00000381140 KIF13AQ9H1H9 1805 aa31.37■■■□□ 2.61
GTF3A-201ENST00000381140 CLIP1P30622 1438 aa31.32■■■□□ 2.6
GTF3A-201ENST00000381140 ASXL2Q76L83 1435 aa31.32■■■□□ 2.6
GTF3A-201ENST00000381140 DIP2BQ9P265 1576 aa31.28■■■□□ 2.6
GTF3A-201ENST00000381140 ABCC10Q5T3U5 1492 aa31.28■■■□□ 2.6
GTF3A-201ENST00000381140 FMN1Q68DA7 1419 aa31.26■■■□□ 2.6
GTF3A-201ENST00000381140 FAM69CQ0P6D2 419 aa31.26■■■□□ 2.59
GTF3A-201ENST00000381140 NUP153P49790 1475 aaKnown RBP31.24■■■□□ 2.59
GTF3A-201ENST00000381140 ATP10BO94823 1461 aa31.24■■■□□ 2.59
GTF3A-201ENST00000381140 ATP1B4Q9UN42 357 aaPredicted RBP31.23■■■□□ 2.59
GTF3A-201ENST00000381140 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.22■■■□□ 2.59
GTF3A-201ENST00000381140 HNRNPUL2Q1KMD3 747 aaKnown RBP31.22■■■□□ 2.59
GTF3A-201ENST00000381140 CEP162Q5TB80 1403 aa31.22■■■□□ 2.59
GTF3A-201ENST00000381140 TSPOAP1O95153 1857 aa31.19■■■□□ 2.58
GTF3A-201ENST00000381140 WDR7Q9Y4E6 1490 aa31.18■■■□□ 2.58
GTF3A-201ENST00000381140 HECW1Q76N89 1606 aa31.17■■■□□ 2.58
GTF3A-201ENST00000381140 PCF11O94913 1555 aaKnown RBP31.13■■■□□ 2.57
GTF3A-201ENST00000381140 EPRSP07814 1512 aaKnown RBP31.13■■■□□ 2.57
GTF3A-201ENST00000381140 KCNH8Q96L42 1107 aa31.12■■■□□ 2.57
GTF3A-201ENST00000381140 CDK13Q14004 1512 aaKnown RBP31.11■■■□□ 2.57
GTF3A-201ENST00000381140 GLI2P10070 1586 aa31.08■■■□□ 2.57
GTF3A-201ENST00000381140 LRRIQ1Q96JM4 1722 aa31.08■■■□□ 2.57
GTF3A-201ENST00000381140 CASKIN1Q8WXD9 1431 aa31.03■■■□□ 2.56
GTF3A-201ENST00000381140 MAP3K4Q9Y6R4 1608 aa31.01■■■□□ 2.55
GTF3A-201ENST00000381140 PLEKHD1A6NEE1 506 aa30.99■■■□□ 2.55
GTF3A-201ENST00000381140 FYCO1Q9BQS8 1478 aa30.99■■■□□ 2.55
GTF3A-201ENST00000381140 PPRC1Q5VV67 1664 aaKnown RBP30.96■■■□□ 2.55
GTF3A-201ENST00000381140 CFAP43Q8NDM7 1665 aa30.96■■■□□ 2.55
GTF3A-201ENST00000381140 CCDC18Q5T9S5 1454 aa30.92■■■□□ 2.54
GTF3A-201ENST00000381140 ABCA9Q8IUA7 1624 aa30.88■■■□□ 2.53
GTF3A-201ENST00000381140 CD109Q6YHK3 1445 aa30.88■■■□□ 2.53
GTF3A-201ENST00000381140 CDK11AQ9UQ88 783 aaPredicted RBP30.88■■■□□ 2.53
GTF3A-201ENST00000381140 TEX14Q8IWB6 1497 aa30.82■■■□□ 2.52
GTF3A-201ENST00000381140 VPS8Q8N3P4 1428 aa30.81■■■□□ 2.52
GTF3A-201ENST00000381140 TTC37Q6PGP7 1564 aa30.79■■■□□ 2.52
GTF3A-201ENST00000381140 KDM6BO15054 1643 aa30.79■■■□□ 2.52
GTF3A-201ENST00000381140 KIF14Q15058 1648 aa30.79■■■□□ 2.52
GTF3A-201ENST00000381140 TROQ12816 1431 aaPredicted RBP30.79■■■□□ 2.52
GTF3A-201ENST00000381140 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.79■■■□□ 2.522e-7■■■■□ 26.2
GTF3A-201ENST00000381140 MAGI3Q5TCQ9 1506 aa30.77■■■□□ 2.52
GTF3A-201ENST00000381140 MYO5CQ9NQX4 1742 aa30.69■■■□□ 2.5
GTF3A-201ENST00000381140 MTUS2Q5JR59 1369 aa30.65■■■□□ 2.5
GTF3A-201ENST00000381140 TIAM1Q13009 1591 aa30.63■■■□□ 2.49
GTF3A-201ENST00000381140 COL17A1Q9UMD9 1497 aaPredicted RBP30.59■■■□□ 2.49
GTF3A-201ENST00000381140 CFAP74Q9C0B2 1584 aa30.59■■■□□ 2.49
GTF3A-201ENST00000381140 EHBP1L1Q8N3D4 1523 aa30.58■■■□□ 2.49
GTF3A-201ENST00000381140 FANCAO15360 1455 aa30.58■■■□□ 2.49
GTF3A-201ENST00000381140 NEO1Q92859 1461 aa30.57■■■□□ 2.48
GTF3A-201ENST00000381140 PLCH2O75038 1416 aa30.56■■■□□ 2.48
GTF3A-201ENST00000381140 CDC42BPAQ5VT25 1732 aa30.55■■■□□ 2.48
GTF3A-201ENST00000381140 CDC42BPBQ9Y5S2 1711 aa30.54■■■□□ 2.48
GTF3A-201ENST00000381140 ARHGAP5Q13017 1502 aa30.54■■■□□ 2.48
GTF3A-201ENST00000381140 PREX2Q70Z35 1606 aa30.52■■■□□ 2.48
GTF3A-201ENST00000381140 APLP2Q06481 763 aa30.51■■■□□ 2.47
GTF3A-201ENST00000381140 PHLDB1Q86UU1 1377 aa30.51■■■□□ 2.47
GTF3A-201ENST00000381140 ARAP3Q8WWN8 1544 aa30.5■■■□□ 2.47
GTF3A-201ENST00000381140 AKNAQ7Z591 1439 aa30.5■■■□□ 2.47
GTF3A-201ENST00000381140 SUPT6HQ7KZ85 1726 aaKnown RBP30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms