RNA–Protein interactions for RNA: ENST00000379892.4

DCLK1-203, Transcript of doublecortin like kinase 1, humanhuman

TSL 5 BASIC

Gene DCLK1, Length 2,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-203ENST00000379892 NEUROD1Q13562 356 aa26.78■■□□□ 1.88
DCLK1-203ENST00000379892 CUL7Q14999 1698 aa26.78■■□□□ 1.88
DCLK1-203ENST00000379892 P3H3Q8IVL6 736 aa26.77■■□□□ 1.88
DCLK1-203ENST00000379892 PCF11O94913 1555 aaKnown RBP26.76■■□□□ 1.87
DCLK1-203ENST00000379892 WDR97A6NE52 1622 aa26.74■■□□□ 1.87
DCLK1-203ENST00000379892 ITGAEP38570 1179 aa26.72■■□□□ 1.87
DCLK1-203ENST00000379892 FHOD3Q2V2M9 1422 aa26.72■■□□□ 1.87
DCLK1-203ENST00000379892 CFAP43Q8NDM7 1665 aa26.72■■□□□ 1.87
DCLK1-203ENST00000379892 EFCAB5A4FU69 1503 aa26.7■■□□□ 1.87
DCLK1-203ENST00000379892 PHLDB1Q86UU1 1377 aa26.69■■□□□ 1.86
DCLK1-203ENST00000379892 DNAJC5BQ9UF47 199 aa26.69■■□□□ 1.86
DCLK1-203ENST00000379892 CENPBP07199 599 aaPredicted RBP26.68■■□□□ 1.86
DCLK1-203ENST00000379892 CTTNBP2Q8WZ74 1663 aa26.68■■□□□ 1.86
DCLK1-203ENST00000379892 PDS5BQ9NTI5 1447 aa26.65■■□□□ 1.86
DCLK1-203ENST00000379892 ABCA5Q8WWZ7 1642 aa26.64■■□□□ 1.86
DCLK1-203ENST00000379892 FYCO1Q9BQS8 1478 aa26.64■■□□□ 1.85
DCLK1-203ENST00000379892 TDRD9Q8NDG6 1382 aaKnown RBP26.63■■□□□ 1.85
DCLK1-203ENST00000379892 MIER1Q8N108 512 aa26.63■■□□□ 1.85
DCLK1-203ENST00000379892 ATP1B4Q9UN42 357 aaPredicted RBP26.62■■□□□ 1.85
DCLK1-203ENST00000379892 CASKIN1Q8WXD9 1431 aa26.62■■□□□ 1.85
DCLK1-203ENST00000379892 RAB3GAP2Q9H2M9 1393 aa26.62■■□□□ 1.85
DCLK1-203ENST00000379892 AQRO60306 1485 aaKnown RBP eCLIP26.61■■□□□ 1.85
DCLK1-203ENST00000379892 GAPVD1Q14C86 1478 aa26.59■■□□□ 1.85
DCLK1-203ENST00000379892 KIF21AQ7Z4S6 1674 aa26.57■■□□□ 1.84
DCLK1-203ENST00000379892 SETD5Q9C0A6 1442 aa26.54■■□□□ 1.84
DCLK1-203ENST00000379892 FAM50AQ14320 339 aaKnown RBP26.53■■□□□ 1.84
DCLK1-203ENST00000379892 FMN1Q68DA7 1419 aa26.52■■□□□ 1.84
DCLK1-203ENST00000379892 MAPKBP1O60336 1514 aa26.5■■□□□ 1.83
DCLK1-203ENST00000379892 SNAPC4Q5SXM2 1469 aa26.5■■□□□ 1.83
DCLK1-203ENST00000379892 SAMD9Q5K651 1589 aa26.49■■□□□ 1.83
DCLK1-203ENST00000379892 GTF3C3Q9Y5Q9 886 aa26.47■■□□□ 1.83
DCLK1-203ENST00000379892 TARBP1Q13395 1621 aaKnown RBP26.46■■□□□ 1.83
DCLK1-203ENST00000379892 YTHDC1Q96MU7 727 aaKnown RBP26.45■■□□□ 1.83
DCLK1-203ENST00000379892 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.41■■□□□ 1.82
DCLK1-203ENST00000379892 LRRIQ1Q96JM4 1722 aa26.36■■□□□ 1.81
DCLK1-203ENST00000379892 GRIN2BQ13224 1484 aa26.36■■□□□ 1.81
DCLK1-203ENST00000379892 FGD6Q6ZV73 1430 aa26.35■■□□□ 1.81
DCLK1-203ENST00000379892 MTUS2Q5JR59 1369 aa26.34■■□□□ 1.81
DCLK1-203ENST00000379892 PBRM1Q86U86 1689 aa26.31■■□□□ 1.8
DCLK1-203ENST00000379892 THOC2Q8NI27 1593 aaKnown RBP26.29■■□□□ 1.8
DCLK1-203ENST00000379892 MRC2Q9UBG0 1479 aa26.27■■□□□ 1.8
DCLK1-203ENST00000379892 SIN3AQ96ST3 1273 aa26.26■■□□□ 1.79
DCLK1-203ENST00000379892 NCOA2Q15596 1464 aa26.24■■□□□ 1.79
DCLK1-203ENST00000379892 ADAMTS12P58397 1594 aa26.23■■□□□ 1.79
DCLK1-203ENST00000379892 PTPRKQ15262 1439 aa26.21■■□□□ 1.79
DCLK1-203ENST00000379892 EHBP1L1Q8N3D4 1523 aa26.21■■□□□ 1.79
DCLK1-203ENST00000379892 MYOM3Q5VTT5 1437 aa26.2■■□□□ 1.79
DCLK1-203ENST00000379892 SUPT6HQ7KZ85 1726 aaKnown RBP26.2■■□□□ 1.78
DCLK1-203ENST00000379892 IQGAP2Q13576 1575 aa26.19■■□□□ 1.78
DCLK1-203ENST00000379892 MAGI3Q5TCQ9 1506 aa26.17■■□□□ 1.78
DCLK1-203ENST00000379892 CCDC18Q5T9S5 1454 aa26.14■■□□□ 1.78
DCLK1-203ENST00000379892 HFM1A2PYH4 1435 aa26.14■■□□□ 1.78
DCLK1-203ENST00000379892 UGGT2Q9NYU1 1516 aa26.14■■□□□ 1.78
DCLK1-203ENST00000379892 ARHGEF11O15085 1522 aa26.14■■□□□ 1.77
DCLK1-203ENST00000379892 TIMELESSQ9UNS1 1208 aa26.12■■□□□ 1.77
DCLK1-203ENST00000379892 PTPN23Q9H3S7 1636 aa26.11■■□□□ 1.77
DCLK1-203ENST00000379892 PELP1Q8IZL8 1130 aaKnown RBP26.11■■□□□ 1.77
DCLK1-203ENST00000379892 HECW1Q76N89 1606 aa26.11■■□□□ 1.77
DCLK1-203ENST00000379892 ZNF608Q9ULD9 1512 aaPredicted RBP26.1■■□□□ 1.77
DCLK1-203ENST00000379892 IFT140Q96RY7 1462 aa26.09■■□□□ 1.77
DCLK1-203ENST00000379892 NAIPQ13075 1403 aa26.07■■□□□ 1.76
DCLK1-203ENST00000379892 WDR62O43379 1518 aa26.07■■□□□ 1.76
DCLK1-203ENST00000379892 EPRSP07814 1512 aaKnown RBP26.06■■□□□ 1.76
DCLK1-203ENST00000379892 UACAQ9BZF9 1416 aa26.05■■□□□ 1.76
DCLK1-203ENST00000379892 PPP1R15AO75807 674 aaPredicted RBP26.03■■□□□ 1.76
DCLK1-203ENST00000379892 CDK13Q14004 1512 aaKnown RBP26.02■■□□□ 1.76
DCLK1-203ENST00000379892 TCOF1Q13428 1488 aaKnown RBP26.01■■□□□ 1.75
DCLK1-203ENST00000379892 KIAA0586Q9BVV6 1533 aa25.95■■□□□ 1.74
DCLK1-203ENST00000379892 ARID3CA6NKF2 412 aa25.94■■□□□ 1.74
DCLK1-203ENST00000379892 TONSLQ96HA7 1378 aa25.93■■□□□ 1.74
DCLK1-203ENST00000379892 DISP1Q96F81 1524 aa25.92■■□□□ 1.74
DCLK1-203ENST00000379892 EIF4G3O43432 1585 aaKnown RBP25.92■■□□□ 1.74
DCLK1-203ENST00000379892 KIAA0556O60303 1618 aa25.92■■□□□ 1.74
DCLK1-203ENST00000379892 RRP7BPQ9NSQ0 103 aa25.91■■□□□ 1.74
DCLK1-203ENST00000379892 MIA2Q96PC5 1412 aa25.9■■□□□ 1.74
DCLK1-203ENST00000379892 CHIC2Q9UKJ5 165 aa25.9■■□□□ 1.74
DCLK1-203ENST00000379892 DDX10Q13206 875 aaKnown RBP25.9■■□□□ 1.74
DCLK1-203ENST00000379892 GRIN2AQ12879 1464 aa25.9■■□□□ 1.74
DCLK1-203ENST00000379892 GCC2Q8IWJ2 1684 aa25.88■■□□□ 1.73
DCLK1-203ENST00000379892 HIRIP3Q9BW71 556 aaPredicted RBP25.86■■□□□ 1.73
DCLK1-203ENST00000379892 AKNAQ7Z591 1439 aa25.86■■□□□ 1.73
DCLK1-203ENST00000379892 KCNH8Q96L42 1107 aa25.84■■□□□ 1.73
DCLK1-203ENST00000379892 NUP153P49790 1475 aaKnown RBP25.83■■□□□ 1.73
DCLK1-203ENST00000379892 ERCC6Q03468 1493 aa25.82■■□□□ 1.72
DCLK1-203ENST00000379892 KDM6BO15054 1643 aa25.82■■□□□ 1.72
DCLK1-203ENST00000379892 DENND4BO75064 1496 aaPredicted RBP25.8■■□□□ 1.72
DCLK1-203ENST00000379892 RAPGEF6Q8TEU7 1601 aa25.8■■□□□ 1.72
DCLK1-203ENST00000379892 KDM5BQ9UGL1 1544 aa25.79■■□□□ 1.72
DCLK1-203ENST00000379892 MAGI1Q96QZ7 1491 aaPredicted RBP25.78■■□□□ 1.72
DCLK1-203ENST00000379892 TRIM52Q96A61 297 aa25.75■■□□□ 1.71
DCLK1-203ENST00000379892 CEP170Q5SW79 1584 aa25.73■■□□□ 1.71
DCLK1-203ENST00000379892 DAPK1P53355 1430 aa25.72■■□□□ 1.71
DCLK1-203ENST00000379892 SYNJ2O15056 1496 aa25.72■■□□□ 1.71
DCLK1-203ENST00000379892 CHMP7Q8WUX9 453 aaPredicted RBP25.72■■□□□ 1.71
DCLK1-203ENST00000379892 ABCC5O15440 1437 aa25.69■■□□□ 1.7
DCLK1-203ENST00000379892 MPHOSPH9Q99550 1183 aa25.69■■□□□ 1.7
DCLK1-203ENST00000379892 DNMT1P26358 1616 aaKnown RBP25.69■■□□□ 1.7
DCLK1-203ENST00000379892 ROCK1Q13464 1354 aa25.68■■□□□ 1.7
DCLK1-203ENST00000379892 ZNF644Q9H582 1327 aaPredicted RBP25.68■■□□□ 1.7
DCLK1-203ENST00000379892 CDK11AQ9UQ88 783 aaPredicted RBP25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms