RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 MRC2Q9UBG0 1479 aa22.33■■□□□ 1.16
PRNP-201ENST00000379440 FHOD3Q2V2M9 1422 aa22.33■■□□□ 1.16
PRNP-201ENST00000379440 CTTNBP2Q8WZ74 1663 aa22.31■■□□□ 1.16
PRNP-201ENST00000379440 FHAD1B1AJZ9 1412 aa22.29■■□□□ 1.16
PRNP-201ENST00000379440 TIAM1Q13009 1591 aa22.29■■□□□ 1.16
PRNP-201ENST00000379440 ATP1B4Q9UN42 357 aaPredicted RBP22.28■■□□□ 1.16
PRNP-201ENST00000379440 RRBP1Q9P2E9 1410 aaKnown RBP22.27■■□□□ 1.15
PRNP-201ENST00000379440 AQRO60306 1485 aaKnown RBP eCLIP22.26■■□□□ 1.15
PRNP-201ENST00000379440 PCF11O94913 1555 aaKnown RBP22.26■■□□□ 1.15
PRNP-201ENST00000379440 EFCAB5A4FU69 1503 aa22.25■■□□□ 1.15
PRNP-201ENST00000379440 MAP3K1Q13233 1512 aa22.25■■□□□ 1.15
PRNP-201ENST00000379440 LRRC9Q6ZRR7 1453 aa22.22■■□□□ 1.15
PRNP-201ENST00000379440 CCNB3Q8WWL7 1395 aa22.21■■□□□ 1.15
PRNP-201ENST00000379440 PBRM1Q86U86 1689 aa22.19■■□□□ 1.14
PRNP-201ENST00000379440 CASKIN1Q8WXD9 1431 aa22.16■■□□□ 1.14
PRNP-201ENST00000379440 WDR62O43379 1518 aa22.16■■□□□ 1.14
PRNP-201ENST00000379440 ITGAEP38570 1179 aa22.15■■□□□ 1.14
PRNP-201ENST00000379440 ZNF608Q9ULD9 1512 aaPredicted RBP22.15■■□□□ 1.14
PRNP-201ENST00000379440 FYCO1Q9BQS8 1478 aa22.15■■□□□ 1.14
PRNP-201ENST00000379440 CFAP43Q8NDM7 1665 aa22.14■■□□□ 1.14
PRNP-201ENST00000379440 PHLDB1Q86UU1 1377 aa22.13■■□□□ 1.13
PRNP-201ENST00000379440 FMN1Q68DA7 1419 aa22.12■■□□□ 1.13
PRNP-201ENST00000379440 IFT140Q96RY7 1462 aa22.12■■□□□ 1.13
PRNP-201ENST00000379440 SAMD9Q5K651 1589 aa22.12■■□□□ 1.13
PRNP-201ENST00000379440 ERCC6Q03468 1493 aa22.12■■□□□ 1.13
PRNP-201ENST00000379440 GRIN2BQ13224 1484 aa22.11■■□□□ 1.13
PRNP-201ENST00000379440 ADAMTS12P58397 1594 aa22.09■■□□□ 1.13
PRNP-201ENST00000379440 SNAPC4Q5SXM2 1469 aa22.08■■□□□ 1.13
PRNP-201ENST00000379440 DHX57Q6P158 1386 aaKnown RBP22.05■■□□□ 1.12
PRNP-201ENST00000379440 FAM50AQ14320 339 aaKnown RBP22.02■■□□□ 1.12
PRNP-201ENST00000379440 IQGAP2Q13576 1575 aa22■■□□□ 1.11
PRNP-201ENST00000379440 THOC2Q8NI27 1593 aaKnown RBP21.99■■□□□ 1.11
PRNP-201ENST00000379440 LRRIQ1Q96JM4 1722 aa21.98■■□□□ 1.11
PRNP-201ENST00000379440 EIF4G3O43432 1585 aaKnown RBP21.97■■□□□ 1.11
PRNP-201ENST00000379440 MTUS2Q5JR59 1369 aa21.95■■□□□ 1.1
PRNP-201ENST00000379440 RAB3GAP2Q9H2M9 1393 aa21.93■■□□□ 1.1
PRNP-201ENST00000379440 SCAF1Q9H7N4 1312 aaKnown RBP21.92■■□□□ 1.1
PRNP-201ENST00000379440 CLSPNQ9HAW4 1339 aa21.92■■□□□ 1.1
PRNP-201ENST00000379440 ZNF316A6NFI3 1004 aaPredicted RBP21.92■■□□□ 1.1
PRNP-201ENST00000379440 DIEXFQ68CQ4 756 aaKnown RBP21.92■■□□□ 1.1
PRNP-201ENST00000379440 GRIN2AQ12879 1464 aa21.88■■□□□ 1.09
PRNP-201ENST00000379440 SETD5Q9C0A6 1442 aa21.87■■□□□ 1.09
PRNP-201ENST00000379440 KIAA0586Q9BVV6 1533 aa21.86■■□□□ 1.09
PRNP-201ENST00000379440 UGGT2Q9NYU1 1516 aa21.86■■□□□ 1.09
PRNP-201ENST00000379440 FGD6Q6ZV73 1430 aa21.85■■□□□ 1.09
PRNP-201ENST00000379440 NCOA2Q15596 1464 aa21.84■■□□□ 1.09
PRNP-201ENST00000379440 CHMP7Q8WUX9 453 aaPredicted RBP21.83■■□□□ 1.09
PRNP-201ENST00000379440 ARID3CA6NKF2 412 aa21.83■■□□□ 1.09
PRNP-201ENST00000379440 MAGI3Q5TCQ9 1506 aa21.83■■□□□ 1.08
PRNP-201ENST00000379440 FBLN2P98095 1184 aa21.83■■□□□ 1.08
PRNP-201ENST00000379440 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.82■■□□□ 1.08
PRNP-201ENST00000379440 MAGI1Q96QZ7 1491 aaPredicted RBP21.81■■□□□ 1.08
PRNP-201ENST00000379440 HECW1Q76N89 1606 aa21.81■■□□□ 1.08
PRNP-201ENST00000379440 CCDC18Q5T9S5 1454 aa21.8■■□□□ 1.08
PRNP-201ENST00000379440 EHBP1L1Q8N3D4 1523 aa21.8■■□□□ 1.08
PRNP-201ENST00000379440 DISP1Q96F81 1524 aa21.8■■□□□ 1.08
PRNP-201ENST00000379440 EPRSP07814 1512 aaKnown RBP21.79■■□□□ 1.08
PRNP-201ENST00000379440 SUPT6HQ7KZ85 1726 aaKnown RBP21.78■■□□□ 1.08
PRNP-201ENST00000379440 SYNJ2O15056 1496 aa21.77■■□□□ 1.08
PRNP-201ENST00000379440 MYOM3Q5VTT5 1437 aa21.77■■□□□ 1.08
PRNP-201ENST00000379440 CDK13Q14004 1512 aaKnown RBP21.77■■□□□ 1.08
PRNP-201ENST00000379440 KIAA0556O60303 1618 aa21.77■■□□□ 1.08
PRNP-201ENST00000379440 CEP170Q5SW79 1584 aa21.75■■□□□ 1.07
PRNP-201ENST00000379440 MAPKBP1O60336 1514 aa21.74■■□□□ 1.07
PRNP-201ENST00000379440 PTPRKQ15262 1439 aa21.73■■□□□ 1.07
PRNP-201ENST00000379440 ARHGEF11O15085 1522 aa21.72■■□□□ 1.07
PRNP-201ENST00000379440 PTPN23Q9H3S7 1636 aa21.66■■□□□ 1.06
PRNP-201ENST00000379440 NUP160Q12769 1436 aa21.65■■□□□ 1.06
PRNP-201ENST00000379440 NUP153P49790 1475 aaKnown RBP21.65■■□□□ 1.06
PRNP-201ENST00000379440 JPH4Q96JJ6 628 aa21.65■■□□□ 1.06
PRNP-201ENST00000379440 PRKCSHP14314 528 aaPredicted RBP21.64■■□□□ 1.06
PRNP-201ENST00000379440 SIN3AQ96ST3 1273 aa21.63■■□□□ 1.05
PRNP-201ENST00000379440 RAPGEF6Q8TEU7 1601 aa21.63■■□□□ 1.05
PRNP-201ENST00000379440 HFM1A2PYH4 1435 aa21.61■■□□□ 1.05
PRNP-201ENST00000379440 NEUROD1Q13562 356 aa21.6■■□□□ 1.05
PRNP-201ENST00000379440 TCOF1Q13428 1488 aaKnown RBP21.59■■□□□ 1.05
PRNP-201ENST00000379440 PLB1Q6P1J6 1458 aa21.59■■□□□ 1.05
PRNP-201ENST00000379440 CHIC2Q9UKJ5 165 aa21.58■■□□□ 1.05
PRNP-201ENST00000379440 NAIPQ13075 1403 aa21.58■■□□□ 1.04
PRNP-201ENST00000379440 CARMIL2Q6F5E8 1435 aa21.57■■□□□ 1.04
PRNP-201ENST00000379440 RRP7BPQ9NSQ0 103 aa21.55■■□□□ 1.04
PRNP-201ENST00000379440 MIA2Q96PC5 1412 aa21.54■■□□□ 1.04
PRNP-201ENST00000379440 CDK11AQ9UQ88 783 aaPredicted RBP21.53■■□□□ 1.04
PRNP-201ENST00000379440 SLC24A1O60721 1099 aa21.53■■□□□ 1.04
PRNP-201ENST00000379440 MIER1Q8N108 512 aa21.53■■□□□ 1.04
PRNP-201ENST00000379440 PRG4Q92954 1404 aaPredicted RBP21.51■■□□□ 1.03
PRNP-201ENST00000379440 UACAQ9BZF9 1416 aa21.49■■□□□ 1.03
PRNP-201ENST00000379440 ZNF644Q9H582 1327 aaPredicted RBP21.48■■□□□ 1.03
PRNP-201ENST00000379440 TROQ12816 1431 aaPredicted RBP21.46■■□□□ 1.03
PRNP-201ENST00000379440 KDM6BO15054 1643 aa21.41■■□□□ 1.02
PRNP-201ENST00000379440 TIMELESSQ9UNS1 1208 aa21.41■■□□□ 1.02
PRNP-201ENST00000379440 ABCA8O94911 1581 aa21.4■■□□□ 1.02
PRNP-201ENST00000379440 DAPK1P53355 1430 aa21.4■■□□□ 1.02
PRNP-201ENST00000379440 GCC2Q8IWJ2 1684 aa21.4■■□□□ 1.02
PRNP-201ENST00000379440 CHD1O14646 1710 aa21.4■■□□□ 1.02
PRNP-201ENST00000379440 KIF14Q15058 1648 aa21.39■■□□□ 1.01
PRNP-201ENST00000379440 TRIM52Q96A61 297 aa21.39■■□□□ 1.01
PRNP-201ENST00000379440 ABCC5O15440 1437 aa21.38■■□□□ 1.01
PRNP-201ENST00000379440 AKNAQ7Z591 1439 aa21.38■■□□□ 1.01
PRNP-201ENST00000379440 CFDP1Q9UEE9 299 aaPredicted RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms