RNA–Protein interactions for RNA: ENST00000379073.9

PMFBP1-203, Transcript of polyamine modulated factor 1 binding protein 1, humanhuman

TSL 2

Gene PMFBP1, Length 3,671 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1-203ENST00000379073 WDR62O43379 1518 aa10.6□□□□□ -0.71
PMFBP1-203ENST00000379073 FHOD3Q2V2M9 1422 aa10.59□□□□□ -0.71
PMFBP1-203ENST00000379073 FHAD1B1AJZ9 1412 aa10.58□□□□□ -0.72
PMFBP1-203ENST00000379073 ERICH3Q5RHP9 1530 aa10.56□□□□□ -0.72
PMFBP1-203ENST00000379073 KANK4Q5T7N3 995 aaPredicted RBP10.56□□□□□ -0.72
PMFBP1-203ENST00000379073 JPH4Q96JJ6 628 aa10.55□□□□□ -0.72
PMFBP1-203ENST00000379073 TARBP1Q13395 1621 aaKnown RBP10.55□□□□□ -0.72
PMFBP1-203ENST00000379073 VPS8Q8N3P4 1428 aa10.54□□□□□ -0.72
PMFBP1-203ENST00000379073 THOC2Q8NI27 1593 aaKnown RBP10.54□□□□□ -0.72
PMFBP1-203ENST00000379073 FAM50AQ14320 339 aaKnown RBP10.54□□□□□ -0.72
PMFBP1-203ENST00000379073 ARAP1Q96P48 1450 aa10.52□□□□□ -0.72
PMFBP1-203ENST00000379073 ARHGAP35Q9NRY4 1499 aa10.51□□□□□ -0.73
PMFBP1-203ENST00000379073 EIF4G3O43432 1585 aaKnown RBP10.5□□□□□ -0.73
PMFBP1-203ENST00000379073 ABCA5Q8WWZ7 1642 aa10.49□□□□□ -0.73
PMFBP1-203ENST00000379073 CCER1Q8TC90 406 aaPredicted RBP10.48□□□□□ -0.73
PMFBP1-203ENST00000379073 CUL7Q14999 1698 aa10.48□□□□□ -0.73
PMFBP1-203ENST00000379073 GRIN2AQ12879 1464 aa10.47□□□□□ -0.73
PMFBP1-203ENST00000379073 MTUS2Q5JR59 1369 aa10.47□□□□□ -0.73
PMFBP1-203ENST00000379073 SYNJ2O15056 1496 aa10.46□□□□□ -0.74
PMFBP1-203ENST00000379073 ZNF777Q9ULD5 760 aaPredicted RBP10.45□□□□□ -0.74
PMFBP1-203ENST00000379073 MAGI1Q96QZ7 1491 aaPredicted RBP10.45□□□□□ -0.74
PMFBP1-203ENST00000379073 PBRM1Q86U86 1689 aa10.44□□□□□ -0.74
PMFBP1-203ENST00000379073 KCNH8Q96L42 1107 aa10.44□□□□□ -0.74
PMFBP1-203ENST00000379073 OSCARQ8IYS5 282 aa10.43□□□□□ -0.74
PMFBP1-203ENST00000379073 DNAJC5Q9H3Z4 198 aa10.43□□□□□ -0.74
PMFBP1-203ENST00000379073 WDR97A6NE52 1622 aa10.43□□□□□ -0.74
PMFBP1-203ENST00000379073 ADAMTS12P58397 1594 aa10.43□□□□□ -0.74
PMFBP1-203ENST00000379073 CARMIL2Q6F5E8 1435 aa10.42□□□□□ -0.74
PMFBP1-203ENST00000379073 FMN1Q68DA7 1419 aa10.42□□□□□ -0.74
PMFBP1-203ENST00000379073 CDK11AQ9UQ88 783 aaPredicted RBP10.42□□□□□ -0.74
PMFBP1-203ENST00000379073 KIAA0586Q9BVV6 1533 aa10.41□□□□□ -0.74
PMFBP1-203ENST00000379073 PRG4Q92954 1404 aaPredicted RBP10.4□□□□□ -0.74
PMFBP1-203ENST00000379073 IQGAP2Q13576 1575 aa10.4□□□□□ -0.75
PMFBP1-203ENST00000379073 PLEKHD1A6NEE1 506 aa10.38□□□□□ -0.75
PMFBP1-203ENST00000379073 CHIC2Q9UKJ5 165 aa10.38□□□□□ -0.75
PMFBP1-203ENST00000379073 PTPRGP23470 1445 aa10.38□□□□□ -0.75
PMFBP1-203ENST00000379073 MYT1LQ9UL68 1186 aa10.35□□□□□ -0.75
PMFBP1-203ENST00000379073 NPM1P06748 294 aaKnown RBP eCLIP10.35□□□□□ -0.75
PMFBP1-203ENST00000379073 CYB5RLQ6IPT4 315 aa10.34□□□□□ -0.75
PMFBP1-203ENST00000379073 CTTNBP2Q8WZ74 1663 aa10.34□□□□□ -0.75
PMFBP1-203ENST00000379073 CEP170Q5SW79 1584 aa10.33□□□□□ -0.76
PMFBP1-203ENST00000379073 EFCAB5A4FU69 1503 aa10.33□□□□□ -0.76
PMFBP1-203ENST00000379073 CASKIN1Q8WXD9 1431 aa10.33□□□□□ -0.76
PMFBP1-203ENST00000379073 PLB1Q6P1J6 1458 aa10.32□□□□□ -0.76
PMFBP1-203ENST00000379073 ZEB1P37275 1124 aaPredicted RBP10.32□□□□□ -0.76
PMFBP1-203ENST00000379073 PHF23Q9BUL5 403 aaPredicted RBP10.32□□□□□ -0.76
PMFBP1-203ENST00000379073 PCF11O94913 1555 aaKnown RBP10.32□□□□□ -0.76
PMFBP1-203ENST00000379073 NUP160Q12769 1436 aa10.31□□□□□ -0.76
PMFBP1-203ENST00000379073 CCNB3Q8WWL7 1395 aa10.3□□□□□ -0.76
PMFBP1-203ENST00000379073 CDK13Q14004 1512 aaKnown RBP10.3□□□□□ -0.76
PMFBP1-203ENST00000379073 CFDP1Q9UEE9 299 aaPredicted RBP10.3□□□□□ -0.76
PMFBP1-203ENST00000379073 RRP7BPQ9NSQ0 103 aa10.29□□□□□ -0.76
PMFBP1-203ENST00000379073 PHLDB1Q86UU1 1377 aa10.29□□□□□ -0.76
PMFBP1-203ENST00000379073 LRRC9Q6ZRR7 1453 aa10.29□□□□□ -0.76
PMFBP1-203ENST00000379073 DISP1Q96F81 1524 aa10.28□□□□□ -0.76
PMFBP1-203ENST00000379073 TRIM52Q96A61 297 aa10.28□□□□□ -0.76
PMFBP1-203ENST00000379073 FYCO1Q9BQS8 1478 aa10.28□□□□□ -0.76
PMFBP1-203ENST00000379073 CHD1O14646 1710 aa10.27□□□□□ -0.77
PMFBP1-203ENST00000379073 UGGT2Q9NYU1 1516 aa10.26□□□□□ -0.77
PMFBP1-203ENST00000379073 ZNF644Q9H582 1327 aaPredicted RBP10.26□□□□□ -0.77
PMFBP1-203ENST00000379073 TIAM1Q13009 1591 aa10.25□□□□□ -0.77
PMFBP1-203ENST00000379073 EPRSP07814 1512 aaKnown RBP10.24□□□□□ -0.77
PMFBP1-203ENST00000379073 KIAA0556O60303 1618 aa10.24□□□□□ -0.77
PMFBP1-203ENST00000379073 NEUROD1Q13562 356 aa10.23□□□□□ -0.77
PMFBP1-203ENST00000379073 SAMD9Q5K651 1589 aa10.22□□□□□ -0.77
PMFBP1-203ENST00000379073 ERCC6L2Q5T890 1561 aa10.22□□□□□ -0.77
PMFBP1-203ENST00000379073 NCOA2Q15596 1464 aa10.21□□□□□ -0.77
PMFBP1-203ENST00000379073 UACAQ9BZF9 1416 aa10.21□□□□□ -0.78
PMFBP1-203ENST00000379073 HNRNPMP52272 730 aaKnown RBP eCLIP10.2□□□□□ -0.78
PMFBP1-203ENST00000379073 CCDC18Q5T9S5 1454 aa10.2□□□□□ -0.78
PMFBP1-203ENST00000379073 NUP153P49790 1475 aaKnown RBP10.2□□□□□ -0.78
PMFBP1-203ENST00000379073 HECW1Q76N89 1606 aa10.19□□□□□ -0.78
PMFBP1-203ENST00000379073 TSPY4P0CV99 314 aa10.19□□□□□ -0.78
PMFBP1-203ENST00000379073 TSPY10P0CW01 314 aa10.19□□□□□ -0.78
PMFBP1-203ENST00000379073 FGD6Q6ZV73 1430 aa10.17□□□□□ -0.78
PMFBP1-203ENST00000379073 ATP10BO94823 1461 aa10.16□□□□□ -0.78
PMFBP1-203ENST00000379073 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.16□□□□□ -0.78
PMFBP1-203ENST00000379073 RAPGEF6Q8TEU7 1601 aa10.16□□□□□ -0.78
PMFBP1-203ENST00000379073 MYOM3Q5VTT5 1437 aa10.16□□□□□ -0.78
PMFBP1-203ENST00000379073 TROQ12816 1431 aaPredicted RBP10.15□□□□□ -0.78
PMFBP1-203ENST00000379073 RAB3GAP2Q9H2M9 1393 aa10.13□□□□□ -0.79
PMFBP1-203ENST00000379073 MAGI3Q5TCQ9 1506 aa10.13□□□□□ -0.79
PMFBP1-203ENST00000379073 EHBP1L1Q8N3D4 1523 aa10.13□□□□□ -0.79
PMFBP1-203ENST00000379073 RRBP1Q9P2E9 1410 aaKnown RBP10.13□□□□□ -0.79
PMFBP1-203ENST00000379073 ARHGEF11O15085 1522 aa10.12□□□□□ -0.79
PMFBP1-203ENST00000379073 EFCAB2Q5VUJ9 269 aa10.12□□□□□ -0.79
PMFBP1-203ENST00000379073 MAP3K1Q13233 1512 aa10.12□□□□□ -0.79
PMFBP1-203ENST00000379073 TRHP20396 242 aaPredicted RBP10.11□□□□□ -0.79
PMFBP1-203ENST00000379073 FOXD1Q16676 465 aa10.11□□□□□ -0.79
PMFBP1-203ENST00000379073 SIN3AQ96ST3 1273 aa10.11□□□□□ -0.79
PMFBP1-203ENST00000379073 SCAF1Q9H7N4 1312 aaKnown RBP10.11□□□□□ -0.79
PMFBP1-203ENST00000379073 SETD5Q9C0A6 1442 aa10.1□□□□□ -0.79
PMFBP1-203ENST00000379073 SUPT6HQ7KZ85 1726 aaKnown RBP10.09□□□□□ -0.79
PMFBP1-203ENST00000379073 FAM69CQ0P6D2 419 aa10.09□□□□□ -0.79
PMFBP1-203ENST00000379073 CFAP43Q8NDM7 1665 aa10.08□□□□□ -0.8
PMFBP1-203ENST00000379073 AFAP1Q8N556 730 aa10.08□□□□□ -0.8
PMFBP1-203ENST00000379073 SLC4A1APQ9BWU0 796 aaKnown RBP10.08□□□□□ -0.8
PMFBP1-203ENST00000379073 CLASP1Q7Z460 1538 aa10.07□□□□□ -0.8
PMFBP1-203ENST00000379073 ABCA8O94911 1581 aa10.06□□□□□ -0.8
PMFBP1-203ENST00000379073 ZNF326Q5BKZ1 582 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms