RNA–Protein interactions for RNA: ENST00000378954.8

ATL2-201, Transcript of atlastin GTPase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATL2, Length 2,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL2-201ENST00000378954 FHOD3Q2V2M9 1422 aa20.36■□□□□ 0.85
ATL2-201ENST00000378954 ERCC6Q03468 1493 aa20.35■□□□□ 0.85
ATL2-201ENST00000378954 ATP1B4Q9UN42 357 aaPredicted RBP20.32■□□□□ 0.84
ATL2-201ENST00000378954 ZNF608Q9ULD9 1512 aaPredicted RBP20.32■□□□□ 0.84
ATL2-201ENST00000378954 WDR62O43379 1518 aa20.31■□□□□ 0.84
ATL2-201ENST00000378954 CTTNBP2Q8WZ74 1663 aa20.31■□□□□ 0.84
ATL2-201ENST00000378954 FHAD1B1AJZ9 1412 aa20.27■□□□□ 0.84
ATL2-201ENST00000378954 IFT140Q96RY7 1462 aa20.27■□□□□ 0.84
ATL2-201ENST00000378954 PBRM1Q86U86 1689 aa20.26■□□□□ 0.83
ATL2-201ENST00000378954 PCF11O94913 1555 aaKnown RBP20.25■□□□□ 0.83
ATL2-201ENST00000378954 EFCAB5A4FU69 1503 aa20.25■□□□□ 0.83
ATL2-201ENST00000378954 TIAM1Q13009 1591 aa20.24■□□□□ 0.83
ATL2-201ENST00000378954 GRIN2BQ13224 1484 aa20.24■□□□□ 0.83
ATL2-201ENST00000378954 ADAMTS12P58397 1594 aa20.2■□□□□ 0.82
ATL2-201ENST00000378954 THOC2Q8NI27 1593 aaKnown RBP20.19■□□□□ 0.82
ATL2-201ENST00000378954 LRRC9Q6ZRR7 1453 aa20.18■□□□□ 0.82
ATL2-201ENST00000378954 RRBP1Q9P2E9 1410 aaKnown RBP20.18■□□□□ 0.82
ATL2-201ENST00000378954 MAP3K1Q13233 1512 aa20.17■□□□□ 0.82
ATL2-201ENST00000378954 CASKIN1Q8WXD9 1431 aa20.16■□□□□ 0.82
ATL2-201ENST00000378954 CCNB3Q8WWL7 1395 aa20.15■□□□□ 0.82
ATL2-201ENST00000378954 SAMD9Q5K651 1589 aa20.15■□□□□ 0.82
ATL2-201ENST00000378954 FMN1Q68DA7 1419 aa20.15■□□□□ 0.82
ATL2-201ENST00000378954 FYCO1Q9BQS8 1478 aa20.14■□□□□ 0.82
ATL2-201ENST00000378954 ITGAEP38570 1179 aa20.14■□□□□ 0.81
ATL2-201ENST00000378954 SNAPC4Q5SXM2 1469 aa20.13■□□□□ 0.81
ATL2-201ENST00000378954 EIF4G3O43432 1585 aaKnown RBP20.13■□□□□ 0.81
ATL2-201ENST00000378954 PHLDB1Q86UU1 1377 aa20.12■□□□□ 0.81
ATL2-201ENST00000378954 CFAP43Q8NDM7 1665 aa20.1■□□□□ 0.81
ATL2-201ENST00000378954 IQGAP2Q13576 1575 aa20.08■□□□□ 0.8
ATL2-201ENST00000378954 FBLN2P98095 1184 aa20.04■□□□□ 0.8
ATL2-201ENST00000378954 GRIN2AQ12879 1464 aa20.03■□□□□ 0.8
ATL2-201ENST00000378954 FAM50AQ14320 339 aaKnown RBP20.02■□□□□ 0.8
ATL2-201ENST00000378954 CHMP7Q8WUX9 453 aaPredicted RBP20.01■□□□□ 0.79
ATL2-201ENST00000378954 MTUS2Q5JR59 1369 aa19.99■□□□□ 0.79
ATL2-201ENST00000378954 ARID3CA6NKF2 412 aa19.98■□□□□ 0.79
ATL2-201ENST00000378954 LRRIQ1Q96JM4 1722 aa19.98■□□□□ 0.79
ATL2-201ENST00000378954 KIAA0586Q9BVV6 1533 aa19.98■□□□□ 0.79
ATL2-201ENST00000378954 MAGI1Q96QZ7 1491 aaPredicted RBP19.97■□□□□ 0.79
ATL2-201ENST00000378954 UGGT2Q9NYU1 1516 aa19.95■□□□□ 0.78
ATL2-201ENST00000378954 DHX57Q6P158 1386 aaKnown RBP19.94■□□□□ 0.78
ATL2-201ENST00000378954 SYNJ2O15056 1496 aa19.94■□□□□ 0.78
ATL2-201ENST00000378954 DISP1Q96F81 1524 aa19.92■□□□□ 0.78
ATL2-201ENST00000378954 CEP170Q5SW79 1584 aa19.9■□□□□ 0.78
ATL2-201ENST00000378954 MAGI3Q5TCQ9 1506 aa19.88■□□□□ 0.77
ATL2-201ENST00000378954 RAB3GAP2Q9H2M9 1393 aa19.88■□□□□ 0.77
ATL2-201ENST00000378954 NCOA2Q15596 1464 aa19.87■□□□□ 0.77
ATL2-201ENST00000378954 KIAA0556O60303 1618 aa19.87■□□□□ 0.77
ATL2-201ENST00000378954 FGD6Q6ZV73 1430 aa19.87■□□□□ 0.77
ATL2-201ENST00000378954 CDK13Q14004 1512 aaKnown RBP19.87■□□□□ 0.77
ATL2-201ENST00000378954 EPRSP07814 1512 aaKnown RBP19.86■□□□□ 0.77
ATL2-201ENST00000378954 HECW1Q76N89 1606 aa19.85■□□□□ 0.77
ATL2-201ENST00000378954 CCDC18Q5T9S5 1454 aa19.84■□□□□ 0.77
ATL2-201ENST00000378954 EHBP1L1Q8N3D4 1523 aa19.83■□□□□ 0.76
ATL2-201ENST00000378954 NUP160Q12769 1436 aa19.82■□□□□ 0.76
ATL2-201ENST00000378954 JPH4Q96JJ6 628 aa19.82■□□□□ 0.76
ATL2-201ENST00000378954 SETD5Q9C0A6 1442 aa19.81■□□□□ 0.76
ATL2-201ENST00000378954 MYOM3Q5VTT5 1437 aa19.8■□□□□ 0.76
ATL2-201ENST00000378954 SUPT6HQ7KZ85 1726 aaKnown RBP19.79■□□□□ 0.76
ATL2-201ENST00000378954 CLSPNQ9HAW4 1339 aa19.78■□□□□ 0.76
ATL2-201ENST00000378954 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.78■□□□□ 0.76
ATL2-201ENST00000378954 NUP153P49790 1475 aaKnown RBP19.76■□□□□ 0.75
ATL2-201ENST00000378954 PTPRKQ15262 1439 aa19.75■□□□□ 0.75
ATL2-201ENST00000378954 ARHGEF11O15085 1522 aa19.74■□□□□ 0.75
ATL2-201ENST00000378954 PLB1Q6P1J6 1458 aa19.74■□□□□ 0.75
ATL2-201ENST00000378954 RAPGEF6Q8TEU7 1601 aa19.72■□□□□ 0.75
ATL2-201ENST00000378954 CARMIL2Q6F5E8 1435 aa19.71■□□□□ 0.75
ATL2-201ENST00000378954 ZNF316A6NFI3 1004 aaPredicted RBP19.71■□□□□ 0.75
ATL2-201ENST00000378954 DIEXFQ68CQ4 756 aaKnown RBP19.69■□□□□ 0.74
ATL2-201ENST00000378954 PTPN23Q9H3S7 1636 aa19.68■□□□□ 0.74
ATL2-201ENST00000378954 MAPKBP1O60336 1514 aa19.68■□□□□ 0.74
ATL2-201ENST00000378954 CHIC2Q9UKJ5 165 aa19.66■□□□□ 0.74
ATL2-201ENST00000378954 PRG4Q92954 1404 aaPredicted RBP19.64■□□□□ 0.73
ATL2-201ENST00000378954 CDK11AQ9UQ88 783 aaPredicted RBP19.63■□□□□ 0.73
ATL2-201ENST00000378954 CHD1O14646 1710 aa19.61■□□□□ 0.73
ATL2-201ENST00000378954 SIN3AQ96ST3 1273 aa19.61■□□□□ 0.73
ATL2-201ENST00000378954 RRP7BPQ9NSQ0 103 aa19.61■□□□□ 0.73
ATL2-201ENST00000378954 HFM1A2PYH4 1435 aa19.61■□□□□ 0.73
ATL2-201ENST00000378954 TCOF1Q13428 1488 aaKnown RBP19.6■□□□□ 0.73
ATL2-201ENST00000378954 ZNF644Q9H582 1327 aaPredicted RBP19.6■□□□□ 0.73
ATL2-201ENST00000378954 NAIPQ13075 1403 aa19.59■□□□□ 0.73
ATL2-201ENST00000378954 MIA2Q96PC5 1412 aa19.59■□□□□ 0.73
ATL2-201ENST00000378954 NEUROD1Q13562 356 aa19.58■□□□□ 0.72
ATL2-201ENST00000378954 TROQ12816 1431 aaPredicted RBP19.57■□□□□ 0.72
ATL2-201ENST00000378954 PTPRGP23470 1445 aa19.54■□□□□ 0.72
ATL2-201ENST00000378954 ABCA8O94911 1581 aa19.54■□□□□ 0.72
ATL2-201ENST00000378954 ATP10BO94823 1461 aa19.52■□□□□ 0.72
ATL2-201ENST00000378954 KIF14Q15058 1648 aa19.51■□□□□ 0.71
ATL2-201ENST00000378954 PLEKHD1A6NEE1 506 aa19.5■□□□□ 0.71
ATL2-201ENST00000378954 CFDP1Q9UEE9 299 aaPredicted RBP19.5■□□□□ 0.71
ATL2-201ENST00000378954 ZNF777Q9ULD5 760 aaPredicted RBP19.49■□□□□ 0.71
ATL2-201ENST00000378954 UACAQ9BZF9 1416 aa19.49■□□□□ 0.71
ATL2-201ENST00000378954 ERCC6L2Q5T890 1561 aa19.47■□□□□ 0.71
ATL2-201ENST00000378954 DAPK1P53355 1430 aa19.47■□□□□ 0.71
ATL2-201ENST00000378954 GPATCH8Q9UKJ3 1502 aaKnown RBP19.47■□□□□ 0.71
ATL2-201ENST00000378954 ABCC5O15440 1437 aa19.46■□□□□ 0.71
ATL2-201ENST00000378954 KDM6BO15054 1643 aa19.45■□□□□ 0.7
ATL2-201ENST00000378954 TRIM52Q96A61 297 aa19.44■□□□□ 0.7
ATL2-201ENST00000378954 SHROOM2Q13796 1616 aa19.43■□□□□ 0.7
ATL2-201ENST00000378954 CAMSAP2Q08AD1 1489 aa19.42■□□□□ 0.7
ATL2-201ENST00000378954 ADCY10Q96PN6 1610 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms