RNA–Protein interactions for RNA: ENST00000378705.3

DMD-210, Transcript of dystrophin, humanhuman

TSL 5

Gene DMD, Length 714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-210ENST00000378705 EEA1Q15075 1411 aa13.45□□□□□ -0.26
DMD-210ENST00000378705 CARMIL1Q5VZK9 1371 aa13.45□□□□□ -0.26
DMD-210ENST00000378705 PHF23Q9BUL5 403 aaPredicted RBP13.43□□□□□ -0.26
DMD-210ENST00000378705 SHROOM2Q13796 1616 aa13.4□□□□□ -0.26
DMD-210ENST00000378705 ARAP1Q96P48 1450 aa13.38□□□□□ -0.27
DMD-210ENST00000378705 PRXQ9BXM0 1461 aa13.37□□□□□ -0.27
DMD-210ENST00000378705 RAPGEF2Q9Y4G8 1499 aa13.37□□□□□ -0.27
DMD-210ENST00000378705 ERCC6L2Q5T890 1561 aa13.37□□□□□ -0.27
DMD-210ENST00000378705 KIF21BO75037 1637 aa13.36□□□□□ -0.27
DMD-210ENST00000378705 CYB5RLQ6IPT4 315 aa13.36□□□□□ -0.27
DMD-210ENST00000378705 JPH4Q96JJ6 628 aa13.36□□□□□ -0.27
DMD-210ENST00000378705 CTTNBP2Q8WZ74 1663 aa13.36□□□□□ -0.27
DMD-210ENST00000378705 KIAA0586Q9BVV6 1533 aa13.35□□□□□ -0.27
DMD-210ENST00000378705 FAM9AQ8IZU1 332 aaPredicted RBP13.35□□□□□ -0.27
DMD-210ENST00000378705 PPARGC1BQ86YN6 1023 aaKnown RBP13.34□□□□□ -0.27
DMD-210ENST00000378705 CSRNP3Q8WYN3 585 aa13.34□□□□□ -0.27
DMD-210ENST00000378705 LOC105371045A0A1W2PR82 267 aa13.33□□□□□ -0.28
DMD-210ENST00000378705 PRG4Q92954 1404 aaPredicted RBP13.31□□□□□ -0.28
DMD-210ENST00000378705 TRIM26Q12899 539 aaPredicted RBP13.31□□□□□ -0.28
DMD-210ENST00000378705 IQGAP2Q13576 1575 aa13.28□□□□□ -0.28
DMD-210ENST00000378705 GOLGA3Q08378 1498 aa13.24□□□□□ -0.29
DMD-210ENST00000378705 UGGT2Q9NYU1 1516 aa13.21□□□□□ -0.29
DMD-210ENST00000378705 DISP1Q96F81 1524 aa13.2□□□□□ -0.3
DMD-210ENST00000378705 CARMIL2Q6F5E8 1435 aa13.19□□□□□ -0.3
DMD-210ENST00000378705 ZEB1P37275 1124 aaPredicted RBP13.17□□□□□ -0.3
DMD-210ENST00000378705 TNIKQ9UKE5 1360 aa13.17□□□□□ -0.3
DMD-210ENST00000378705 KIAA0556O60303 1618 aa13.17□□□□□ -0.3
DMD-210ENST00000378705 EHMT2Q96KQ7 1210 aa13.16□□□□□ -0.3
DMD-210ENST00000378705 PTPRGP23470 1445 aa13.15□□□□□ -0.3
DMD-210ENST00000378705 SAMD9Q5K651 1589 aa13.15□□□□□ -0.3
DMD-210ENST00000378705 ADCY10Q96PN6 1610 aa13.13□□□□□ -0.31
DMD-210ENST00000378705 TTBK1Q5TCY1 1321 aaPredicted RBP13.13□□□□□ -0.31
DMD-210ENST00000378705 UBTFP17480 764 aaKnown RBP13.12□□□□□ -0.31
DMD-210ENST00000378705 EFCAB5A4FU69 1503 aa13.1□□□□□ -0.31
DMD-210ENST00000378705 UACAQ9BZF9 1416 aa13.07□□□□□ -0.32
DMD-210ENST00000378705 TRHP20396 242 aaPredicted RBP13.07□□□□□ -0.32
DMD-210ENST00000378705 P3H3Q8IVL6 736 aa13.07□□□□□ -0.32
DMD-210ENST00000378705 UHRF1BP1LA0JNW5 1464 aa13.06□□□□□ -0.32
DMD-210ENST00000378705 NPM1P06748 294 aaKnown RBP eCLIP13.06□□□□□ -0.32
DMD-210ENST00000378705 RANGAP1P46060 587 aaPredicted RBP13.06□□□□□ -0.32
DMD-210ENST00000378705 ABCC2Q92887 1545 aa13.04□□□□□ -0.32
DMD-210ENST00000378705 PLB1Q6P1J6 1458 aa13.03□□□□□ -0.32
DMD-210ENST00000378705 ARHGAP35Q9NRY4 1499 aa13.03□□□□□ -0.32
DMD-210ENST00000378705 MAPKBP1O60336 1514 aa13.03□□□□□ -0.32
DMD-210ENST00000378705 ABCA8O94911 1581 aa13.03□□□□□ -0.32
DMD-210ENST00000378705 FHOD3Q2V2M9 1422 aa13.02□□□□□ -0.33
DMD-210ENST00000378705 KIF13AQ9H1H9 1805 aa13.01□□□□□ -0.33
DMD-210ENST00000378705 KDM5BQ9UGL1 1544 aa13□□□□□ -0.33
DMD-210ENST00000378705 ZCCHC11Q5TAX3 1644 aaKnown RBP12.99□□□□□ -0.33
DMD-210ENST00000378705 CLIP1P30622 1438 aa12.99□□□□□ -0.33
DMD-210ENST00000378705 CEP162Q5TB80 1403 aa12.99□□□□□ -0.33
DMD-210ENST00000378705 RAPGEF6Q8TEU7 1601 aa12.98□□□□□ -0.33
DMD-210ENST00000378705 ABCC10Q5T3U5 1492 aa12.97□□□□□ -0.33
DMD-210ENST00000378705 DIP2BQ9P265 1576 aa12.95□□□□□ -0.34
DMD-210ENST00000378705 ASXL2Q76L83 1435 aa12.95□□□□□ -0.34
DMD-210ENST00000378705 FAM69CQ0P6D2 419 aa12.93□□□□□ -0.34
DMD-210ENST00000378705 FMN1Q68DA7 1419 aa12.93□□□□□ -0.34
DMD-210ENST00000378705 ATP10BO94823 1461 aa12.92□□□□□ -0.34
DMD-210ENST00000378705 PCF11O94913 1555 aaKnown RBP12.92□□□□□ -0.34
DMD-210ENST00000378705 LRRIQ1Q96JM4 1722 aa12.92□□□□□ -0.34
DMD-210ENST00000378705 HECW1Q76N89 1606 aa12.91□□□□□ -0.34
DMD-210ENST00000378705 ARID3CA6NKF2 412 aa12.91□□□□□ -0.34
DMD-210ENST00000378705 NUP153P49790 1475 aaKnown RBP12.9□□□□□ -0.34
DMD-210ENST00000378705 GLI2P10070 1586 aa12.89□□□□□ -0.35
DMD-210ENST00000378705 EPRSP07814 1512 aaKnown RBP12.88□□□□□ -0.35
DMD-210ENST00000378705 WDR7Q9Y4E6 1490 aa12.88□□□□□ -0.35
DMD-210ENST00000378705 TSPOAP1O95153 1857 aa12.88□□□□□ -0.35
DMD-210ENST00000378705 FYCO1Q9BQS8 1478 aa12.86□□□□□ -0.35
DMD-210ENST00000378705 PELP1Q8IZL8 1130 aaKnown RBP12.86□□□□□ -0.35
DMD-210ENST00000378705 CASKIN1Q8WXD9 1431 aa12.85□□□□□ -0.35
DMD-210ENST00000378705 MAP3K4Q9Y6R4 1608 aa12.84□□□□□ -0.35
DMD-210ENST00000378705 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.84□□□□□ -0.35
DMD-210ENST00000378705 HNRNPUL2Q1KMD3 747 aaKnown RBP12.84□□□□□ -0.35
DMD-210ENST00000378705 KCNH8Q96L42 1107 aa12.84□□□□□ -0.35
DMD-210ENST00000378705 PPRC1Q5VV67 1664 aaKnown RBP12.83□□□□□ -0.35
DMD-210ENST00000378705 CDK13Q14004 1512 aaKnown RBP12.83□□□□□ -0.35
DMD-210ENST00000378705 VPS8Q8N3P4 1428 aa12.82□□□□□ -0.36
DMD-210ENST00000378705 CFAP43Q8NDM7 1665 aa12.81□□□□□ -0.36
DMD-210ENST00000378705 ATP1B4Q9UN42 357 aaPredicted RBP12.81□□□□□ -0.36
DMD-210ENST00000378705 CCDC18Q5T9S5 1454 aa12.8□□□□□ -0.36
DMD-210ENST00000378705 PLEKHD1A6NEE1 506 aa12.8□□□□□ -0.36
DMD-210ENST00000378705 SCAF1Q9H7N4 1312 aaKnown RBP12.78□□□□□ -0.36
DMD-210ENST00000378705 ABCA9Q8IUA7 1624 aa12.77□□□□□ -0.36
DMD-210ENST00000378705 CD109Q6YHK3 1445 aa12.77□□□□□ -0.37
DMD-210ENST00000378705 MAGI3Q5TCQ9 1506 aa12.75□□□□□ -0.37
DMD-210ENST00000378705 TIAM1Q13009 1591 aa12.74□□□□□ -0.37
DMD-210ENST00000378705 TEX14Q8IWB6 1497 aa12.74□□□□□ -0.37
DMD-210ENST00000378705 KDM6BO15054 1643 aa12.73□□□□□ -0.37
DMD-210ENST00000378705 KIF14Q15058 1648 aa12.73□□□□□ -0.37
DMD-210ENST00000378705 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.72□□□□□ -0.37
DMD-210ENST00000378705 CDK11AQ9UQ88 783 aaPredicted RBP12.72□□□□□ -0.37
DMD-210ENST00000378705 TTC37Q6PGP7 1564 aa12.7□□□□□ -0.38
DMD-210ENST00000378705 EHBP1L1Q8N3D4 1523 aa12.7□□□□□ -0.38
DMD-210ENST00000378705 COL17A1Q9UMD9 1497 aaPredicted RBP12.7□□□□□ -0.38
DMD-210ENST00000378705 TROQ12816 1431 aaPredicted RBP12.7□□□□□ -0.38
DMD-210ENST00000378705 MAP3K1Q13233 1512 aa12.69□□□□□ -0.38
DMD-210ENST00000378705 MYO5CQ9NQX4 1742 aa12.68□□□□□ -0.38
DMD-210ENST00000378705 SUPT6HQ7KZ85 1726 aaKnown RBP12.66□□□□□ -0.38
DMD-210ENST00000378705 CDC42BPAQ5VT25 1732 aa12.65□□□□□ -0.38
DMD-210ENST00000378705 LRRC9Q6ZRR7 1453 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms