RNA–Protein interactions for RNA: ENST00000378633.5

CDK11A-205, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best) BASIC

Gene CDK11A, Length 2,458 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-205ENST00000378633 NESP48681 1621 aa27.53■■■□□ 2
CDK11A-205ENST00000378633 GTF3C3Q9Y5Q9 886 aa27.5■■□□□ 1.99
CDK11A-205ENST00000378633 PCF11O94913 1555 aaKnown RBP27.45■■□□□ 1.99
CDK11A-205ENST00000378633 ITGAEP38570 1179 aa27.45■■□□□ 1.99
CDK11A-205ENST00000378633 CFAP43Q8NDM7 1665 aa27.45■■□□□ 1.98
CDK11A-205ENST00000378633 CUL7Q14999 1698 aa27.45■■□□□ 1.98
CDK11A-205ENST00000378633 PHLDB1Q86UU1 1377 aa27.42■■□□□ 1.98
CDK11A-205ENST00000378633 PELP1Q8IZL8 1130 aaKnown RBP27.41■■□□□ 1.98
CDK11A-205ENST00000378633 EFCAB5A4FU69 1503 aa27.41■■□□□ 1.98
CDK11A-205ENST00000378633 P3H3Q8IVL6 736 aa27.41■■□□□ 1.98
CDK11A-205ENST00000378633 LAMC3Q9Y6N6 1575 aa27.4■■□□□ 1.98
CDK11A-205ENST00000378633 RAB3GAP2Q9H2M9 1393 aa27.4■■□□□ 1.98
CDK11A-205ENST00000378633 FHOD3Q2V2M9 1422 aa27.38■■□□□ 1.97
CDK11A-205ENST00000378633 YTHDC1Q96MU7 727 aaKnown RBP27.38■■□□□ 1.97
CDK11A-205ENST00000378633 URB2Q14146 1524 aaKnown RBP27.36■■□□□ 1.97
CDK11A-205ENST00000378633 FYCO1Q9BQS8 1478 aa27.35■■□□□ 1.97
CDK11A-205ENST00000378633 WDR97A6NE52 1622 aa27.35■■□□□ 1.97
CDK11A-205ENST00000378633 CTTNBP2Q8WZ74 1663 aa27.35■■□□□ 1.97
CDK11A-205ENST00000378633 AQRO60306 1485 aaKnown RBP eCLIP27.33■■□□□ 1.973e-7■■■□□ 15.1
CDK11A-205ENST00000378633 CASKIN1Q8WXD9 1431 aa27.32■■□□□ 1.96
CDK11A-205ENST00000378633 SETD5Q9C0A6 1442 aa27.32■■□□□ 1.96
CDK11A-205ENST00000378633 MAPKBP1O60336 1514 aa27.3■■□□□ 1.96
CDK11A-205ENST00000378633 ATP1B4Q9UN42 357 aaPredicted RBP27.28■■□□□ 1.96
CDK11A-205ENST00000378633 FAM50AQ14320 339 aaKnown RBP27.26■■□□□ 1.95
CDK11A-205ENST00000378633 ABCA5Q8WWZ7 1642 aa27.25■■□□□ 1.95
CDK11A-205ENST00000378633 FMN1Q68DA7 1419 aa27.23■■□□□ 1.95
CDK11A-205ENST00000378633 PDS5BQ9NTI5 1447 aa27.21■■□□□ 1.95
CDK11A-205ENST00000378633 TDRD9Q8NDG6 1382 aaKnown RBP27.2■■□□□ 1.95
CDK11A-205ENST00000378633 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.19■■□□□ 1.94
CDK11A-205ENST00000378633 GAPVD1Q14C86 1478 aa27.19■■□□□ 1.94
CDK11A-205ENST00000378633 SNAPC4Q5SXM2 1469 aa27.18■■□□□ 1.94
CDK11A-205ENST00000378633 SAMD9Q5K651 1589 aa27.15■■□□□ 1.94
CDK11A-205ENST00000378633 DNAJC5BQ9UF47 199 aa27.09■■□□□ 1.93
CDK11A-205ENST00000378633 KIF21AQ7Z4S6 1674 aa27.08■■□□□ 1.93
CDK11A-205ENST00000378633 FGD6Q6ZV73 1430 aa27.07■■□□□ 1.92
CDK11A-205ENST00000378633 MTUS2Q5JR59 1369 aa27.04■■□□□ 1.92
CDK11A-205ENST00000378633 TARBP1Q13395 1621 aaKnown RBP27.04■■□□□ 1.92
CDK11A-205ENST00000378633 GRIN2BQ13224 1484 aa27.03■■□□□ 1.92
CDK11A-205ENST00000378633 SIN3AQ96ST3 1273 aa27.02■■□□□ 1.92
CDK11A-205ENST00000378633 LRRIQ1Q96JM4 1722 aa27.02■■□□□ 1.92
CDK11A-205ENST00000378633 THOC2Q8NI27 1593 aaKnown RBP27.01■■□□□ 1.91
CDK11A-205ENST00000378633 TIMELESSQ9UNS1 1208 aa26.99■■□□□ 1.91
CDK11A-205ENST00000378633 NCOA2Q15596 1464 aa26.94■■□□□ 1.9
CDK11A-205ENST00000378633 MYOM3Q5VTT5 1437 aa26.92■■□□□ 1.9
CDK11A-205ENST00000378633 PTPRKQ15262 1439 aa26.91■■□□□ 1.9
CDK11A-205ENST00000378633 EHBP1L1Q8N3D4 1523 aa26.91■■□□□ 1.9
CDK11A-205ENST00000378633 HFM1A2PYH4 1435 aa26.9■■□□□ 1.9
CDK11A-205ENST00000378633 SUPT6HQ7KZ85 1726 aaKnown RBP26.9■■□□□ 1.9
CDK11A-205ENST00000378633 PBRM1Q86U86 1689 aa26.89■■□□□ 1.89
CDK11A-205ENST00000378633 CCDC18Q5T9S5 1454 aa26.88■■□□□ 1.89
CDK11A-205ENST00000378633 PTPN23Q9H3S7 1636 aa26.85■■□□□ 1.89
CDK11A-205ENST00000378633 ARHGEF11O15085 1522 aa26.84■■□□□ 1.89
CDK11A-205ENST00000378633 UGGT2Q9NYU1 1516 aa26.84■■□□□ 1.89
CDK11A-205ENST00000378633 PPP1R15AO75807 674 aaPredicted RBP26.83■■□□□ 1.89
CDK11A-205ENST00000378633 UACAQ9BZF9 1416 aa26.83■■□□□ 1.88
CDK11A-205ENST00000378633 MAGI3Q5TCQ9 1506 aa26.82■■□□□ 1.88
CDK11A-205ENST00000378633 ADAMTS12P58397 1594 aa26.81■■□□□ 1.88
CDK11A-205ENST00000378633 IQGAP2Q13576 1575 aa26.81■■□□□ 1.88
CDK11A-205ENST00000378633 NAIPQ13075 1403 aa26.81■■□□□ 1.88
CDK11A-205ENST00000378633 MRC2Q9UBG0 1479 aa26.8■■□□□ 1.88
CDK11A-205ENST00000378633 HECW1Q76N89 1606 aa26.78■■□□□ 1.88
CDK11A-205ENST00000378633 TCOF1Q13428 1488 aaKnown RBP26.73■■□□□ 1.87
CDK11A-205ENST00000378633 DDX10Q13206 875 aaKnown RBP26.72■■□□□ 1.87
CDK11A-205ENST00000378633 EPRSP07814 1512 aaKnown RBP26.72■■□□□ 1.87
CDK11A-205ENST00000378633 TONSLQ96HA7 1378 aa26.71■■□□□ 1.87
CDK11A-205ENST00000378633 KCNH8Q96L42 1107 aa26.67■■□□□ 1.86
CDK11A-205ENST00000378633 WDR62O43379 1518 aa26.66■■□□□ 1.86
CDK11A-205ENST00000378633 IFT140Q96RY7 1462 aa26.65■■□□□ 1.86
CDK11A-205ENST00000378633 CDK13Q14004 1512 aaKnown RBP26.64■■□□□ 1.85
CDK11A-205ENST00000378633 MIA2Q96PC5 1412 aa26.62■■□□□ 1.85
CDK11A-205ENST00000378633 ZNF608Q9ULD9 1512 aaPredicted RBP26.62■■□□□ 1.85
CDK11A-205ENST00000378633 GCC2Q8IWJ2 1684 aa26.61■■□□□ 1.85
CDK11A-205ENST00000378633 HIRIP3Q9BW71 556 aaPredicted RBP26.61■■□□□ 1.85
CDK11A-205ENST00000378633 AKNAQ7Z591 1439 aa26.61■■□□□ 1.85
CDK11A-205ENST00000378633 RRP7BPQ9NSQ0 103 aa26.59■■□□□ 1.85
CDK11A-205ENST00000378633 SUPT16HQ9Y5B9 1047 aaKnown RBP26.58■■□□□ 1.85
CDK11A-205ENST00000378633 CHIC2Q9UKJ5 165 aa26.57■■□□□ 1.84
CDK11A-205ENST00000378633 KDM5BQ9UGL1 1544 aa26.56■■□□□ 1.84
CDK11A-205ENST00000378633 KIAA0586Q9BVV6 1533 aa26.56■■□□□ 1.84
CDK11A-205ENST00000378633 KIAA0556O60303 1618 aa26.53■■□□□ 1.84
CDK11A-205ENST00000378633 DISP1Q96F81 1524 aa26.53■■□□□ 1.84
CDK11A-205ENST00000378633 DENND4BO75064 1496 aaPredicted RBP26.52■■□□□ 1.84
CDK11A-205ENST00000378633 ARID3CA6NKF2 412 aa26.5■■□□□ 1.83
CDK11A-205ENST00000378633 KDM6BO15054 1643 aa26.5■■□□□ 1.83
CDK11A-205ENST00000378633 CCER2I3L3R5 266 aa26.48■■□□□ 1.83
CDK11A-205ENST00000378633 GRIN2AQ12879 1464 aa26.47■■□□□ 1.83
CDK11A-205ENST00000378633 ANP32CO43423 234 aa26.46■■□□□ 1.83
CDK11A-205ENST00000378633 TRIM52Q96A61 297 aa26.46■■□□□ 1.83
CDK11A-205ENST00000378633 NUP153P49790 1475 aaKnown RBP26.45■■□□□ 1.82
CDK11A-205ENST00000378633 EIF4G3O43432 1585 aaKnown RBP26.44■■□□□ 1.82
CDK11A-205ENST00000378633 RAPGEF6Q8TEU7 1601 aa26.42■■□□□ 1.82
CDK11A-205ENST00000378633 MPHOSPH9Q99550 1183 aa26.41■■□□□ 1.82
CDK11A-205ENST00000378633 DAPK1P53355 1430 aa26.41■■□□□ 1.82
CDK11A-205ENST00000378633 ROCK1Q13464 1354 aa26.4■■□□□ 1.82
CDK11A-205ENST00000378633 DNMT1P26358 1616 aaKnown RBP26.37■■□□□ 1.81
CDK11A-205ENST00000378633 ABCC5O15440 1437 aa26.36■■□□□ 1.81
CDK11A-205ENST00000378633 CDK11AQ9UQ88 783 aaPredicted RBP26.34■■□□□ 1.81
CDK11A-205ENST00000378633 MAGI1Q96QZ7 1491 aaPredicted RBP26.34■■□□□ 1.81
CDK11A-205ENST00000378633 ZNF644Q9H582 1327 aaPredicted RBP26.31■■□□□ 1.8
CDK11A-205ENST00000378633 HSPA5P11021 654 aaKnown RBP26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms