RNA–Protein interactions for RNA: ENST00000377792.3

POLR1E-201, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2 BASIC

Gene POLR1E, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-201ENST00000377792 LRRC9Q6ZRR7 1453 aa16.18■□□□□ 0.18
POLR1E-201ENST00000377792 URB2Q14146 1524 aaKnown RBP16.16■□□□□ 0.18
POLR1E-201ENST00000377792 CENPBP07199 599 aaPredicted RBP16.15■□□□□ 0.18
POLR1E-201ENST00000377792 P3H3Q8IVL6 736 aa16.15■□□□□ 0.18
POLR1E-201ENST00000377792 CUL7Q14999 1698 aa16.15■□□□□ 0.18
POLR1E-201ENST00000377792 ITGAEP38570 1179 aa16.13■□□□□ 0.17
POLR1E-201ENST00000377792 PCF11O94913 1555 aaKnown RBP16.13■□□□□ 0.17
POLR1E-201ENST00000377792 FHOD3Q2V2M9 1422 aa16.12■□□□□ 0.17
POLR1E-201ENST00000377792 EFCAB5A4FU69 1503 aa16.12■□□□□ 0.17
POLR1E-201ENST00000377792 PHLDB1Q86UU1 1377 aa16.12■□□□□ 0.17
POLR1E-201ENST00000377792 CFAP43Q8NDM7 1665 aa16.1■□□□□ 0.17
POLR1E-201ENST00000377792 WDR97A6NE52 1622 aa16.1■□□□□ 0.17
POLR1E-201ENST00000377792 PDS5BQ9NTI5 1447 aa16.09■□□□□ 0.17
POLR1E-201ENST00000377792 MIER1Q8N108 512 aa16.09■□□□□ 0.17
POLR1E-201ENST00000377792 FYCO1Q9BQS8 1478 aa16.09■□□□□ 0.17
POLR1E-201ENST00000377792 RAB3GAP2Q9H2M9 1393 aa16.08■□□□□ 0.16
POLR1E-201ENST00000377792 CASKIN1Q8WXD9 1431 aa16.08■□□□□ 0.16
POLR1E-201ENST00000377792 AQRO60306 1485 aaKnown RBP eCLIP16.08■□□□□ 0.164e-7■■■■□ 26.1
POLR1E-201ENST00000377792 TDRD9Q8NDG6 1382 aaKnown RBP16.07■□□□□ 0.16
POLR1E-201ENST00000377792 ATP1B4Q9UN42 357 aaPredicted RBP16.07■□□□□ 0.16
POLR1E-201ENST00000377792 CTTNBP2Q8WZ74 1663 aa16.06■□□□□ 0.16
POLR1E-201ENST00000377792 ABCA5Q8WWZ7 1642 aa16.06■□□□□ 0.16
POLR1E-201ENST00000377792 SLC24A1O60721 1099 aa16.06■□□□□ 0.16
POLR1E-201ENST00000377792 GAPVD1Q14C86 1478 aa16.04■□□□□ 0.16
POLR1E-201ENST00000377792 SETD5Q9C0A6 1442 aa16.04■□□□□ 0.16
POLR1E-201ENST00000377792 FMN1Q68DA7 1419 aa16.02■□□□□ 0.16
POLR1E-201ENST00000377792 FAM50AQ14320 339 aaKnown RBP16.02■□□□□ 0.16
POLR1E-201ENST00000377792 GTF3C3Q9Y5Q9 886 aa16■□□□□ 0.15
POLR1E-201ENST00000377792 MAPKBP1O60336 1514 aa16■□□□□ 0.15
POLR1E-201ENST00000377792 SNAPC4Q5SXM2 1469 aa15.99■□□□□ 0.15
POLR1E-201ENST00000377792 KIF21AQ7Z4S6 1674 aa15.98■□□□□ 0.15
POLR1E-201ENST00000377792 YTHDC1Q96MU7 727 aaKnown RBP15.98■□□□□ 0.15
POLR1E-201ENST00000377792 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.97■□□□□ 0.15
POLR1E-201ENST00000377792 SAMD9Q5K651 1589 aa15.97■□□□□ 0.15
POLR1E-201ENST00000377792 TARBP1Q13395 1621 aaKnown RBP15.95■□□□□ 0.14
POLR1E-201ENST00000377792 FGD6Q6ZV73 1430 aa15.91■□□□□ 0.14
POLR1E-201ENST00000377792 MTUS2Q5JR59 1369 aa15.91■□□□□ 0.14
POLR1E-201ENST00000377792 GRIN2BQ13224 1484 aa15.91■□□□□ 0.14
POLR1E-201ENST00000377792 THOC2Q8NI27 1593 aaKnown RBP15.87■□□□□ 0.13
POLR1E-201ENST00000377792 SIN3AQ96ST3 1273 aa15.86■□□□□ 0.13
POLR1E-201ENST00000377792 LRRIQ1Q96JM4 1722 aa15.85■□□□□ 0.13
POLR1E-201ENST00000377792 MRC2Q9UBG0 1479 aa15.85■□□□□ 0.13
POLR1E-201ENST00000377792 NCOA2Q15596 1464 aa15.85■□□□□ 0.13
POLR1E-201ENST00000377792 PELP1Q8IZL8 1130 aaKnown RBP15.84■□□□□ 0.13
POLR1E-201ENST00000377792 PBRM1Q86U86 1689 aa15.83■□□□□ 0.12
POLR1E-201ENST00000377792 MYOM3Q5VTT5 1437 aa15.83■□□□□ 0.12
POLR1E-201ENST00000377792 TIMELESSQ9UNS1 1208 aa15.82■□□□□ 0.12
POLR1E-201ENST00000377792 EHBP1L1Q8N3D4 1523 aa15.82■□□□□ 0.12
POLR1E-201ENST00000377792 PTPRKQ15262 1439 aa15.82■□□□□ 0.12
POLR1E-201ENST00000377792 ADAMTS12P58397 1594 aa15.81■□□□□ 0.12
POLR1E-201ENST00000377792 HFM1A2PYH4 1435 aa15.8■□□□□ 0.12
POLR1E-201ENST00000377792 IQGAP2Q13576 1575 aa15.8■□□□□ 0.12
POLR1E-201ENST00000377792 CCDC18Q5T9S5 1454 aa15.79■□□□□ 0.12
POLR1E-201ENST00000377792 SUPT6HQ7KZ85 1726 aaKnown RBP15.79■□□□□ 0.12
POLR1E-201ENST00000377792 ARHGEF11O15085 1522 aa15.78■□□□□ 0.12
POLR1E-201ENST00000377792 MAGI3Q5TCQ9 1506 aa15.78■□□□□ 0.12
POLR1E-201ENST00000377792 UGGT2Q9NYU1 1516 aa15.78■□□□□ 0.12
POLR1E-201ENST00000377792 HECW1Q76N89 1606 aa15.75■□□□□ 0.11
POLR1E-201ENST00000377792 PTPN23Q9H3S7 1636 aa15.75■□□□□ 0.11
POLR1E-201ENST00000377792 IFT140Q96RY7 1462 aa15.75■□□□□ 0.11
POLR1E-201ENST00000377792 NAIPQ13075 1403 aa15.75■□□□□ 0.11
POLR1E-201ENST00000377792 UACAQ9BZF9 1416 aa15.75■□□□□ 0.11
POLR1E-201ENST00000377792 PPP1R15AO75807 674 aaPredicted RBP15.74■□□□□ 0.11
POLR1E-201ENST00000377792 ZNF608Q9ULD9 1512 aaPredicted RBP15.73■□□□□ 0.11
POLR1E-201ENST00000377792 EPRSP07814 1512 aaKnown RBP15.73■□□□□ 0.11
POLR1E-201ENST00000377792 WDR62O43379 1518 aa15.72■□□□□ 0.11
POLR1E-201ENST00000377792 TCOF1Q13428 1488 aaKnown RBP15.71■□□□□ 0.11
POLR1E-201ENST00000377792 CDK13Q14004 1512 aaKnown RBP15.69■□□□□ 0.1
POLR1E-201ENST00000377792 KIAA0586Q9BVV6 1533 aa15.68■□□□□ 0.1
POLR1E-201ENST00000377792 TONSLQ96HA7 1378 aa15.67■□□□□ 0.1
POLR1E-201ENST00000377792 MIA2Q96PC5 1412 aa15.66■□□□□ 0.1
POLR1E-201ENST00000377792 DDX10Q13206 875 aaKnown RBP15.65■□□□□ 0.1
POLR1E-201ENST00000377792 RRP7BPQ9NSQ0 103 aa15.64■□□□□ 0.09
POLR1E-201ENST00000377792 DISP1Q96F81 1524 aa15.64■□□□□ 0.09
POLR1E-201ENST00000377792 AKNAQ7Z591 1439 aa15.63■□□□□ 0.09
POLR1E-201ENST00000377792 ARID3CA6NKF2 412 aa15.63■□□□□ 0.09
POLR1E-201ENST00000377792 CHIC2Q9UKJ5 165 aa15.63■□□□□ 0.09
POLR1E-201ENST00000377792 KIAA0556O60303 1618 aa15.62■□□□□ 0.09
POLR1E-201ENST00000377792 GRIN2AQ12879 1464 aa15.62■□□□□ 0.09
POLR1E-201ENST00000377792 EIF4G3O43432 1585 aaKnown RBP15.61■□□□□ 0.09
POLR1E-201ENST00000377792 KCNH8Q96L42 1107 aa15.6■□□□□ 0.09
POLR1E-201ENST00000377792 HIRIP3Q9BW71 556 aaPredicted RBP15.6■□□□□ 0.09
POLR1E-201ENST00000377792 GCC2Q8IWJ2 1684 aa15.6■□□□□ 0.09
POLR1E-201ENST00000377792 NUP153P49790 1475 aaKnown RBP15.58■□□□□ 0.09
POLR1E-201ENST00000377792 DENND4BO75064 1496 aaPredicted RBP15.57■□□□□ 0.08
POLR1E-201ENST00000377792 ERCC6Q03468 1493 aa15.57■□□□□ 0.08
POLR1E-201ENST00000377792 KDM5BQ9UGL1 1544 aa15.57■□□□□ 0.08
POLR1E-201ENST00000377792 TRIM52Q96A61 297 aa15.56■□□□□ 0.08
POLR1E-201ENST00000377792 KDM6BO15054 1643 aa15.56■□□□□ 0.08
POLR1E-201ENST00000377792 MAGI1Q96QZ7 1491 aaPredicted RBP15.55■□□□□ 0.08
POLR1E-201ENST00000377792 RAPGEF6Q8TEU7 1601 aa15.55■□□□□ 0.08
POLR1E-201ENST00000377792 CDK11AQ9UQ88 783 aaPredicted RBP15.53■□□□□ 0.08
POLR1E-201ENST00000377792 DAPK1P53355 1430 aa15.53■□□□□ 0.08
POLR1E-201ENST00000377792 CHMP7Q8WUX9 453 aaPredicted RBP15.53■□□□□ 0.08
POLR1E-201ENST00000377792 ROCK1Q13464 1354 aa15.53■□□□□ 0.08
POLR1E-201ENST00000377792 SYNJ2O15056 1496 aa15.52■□□□□ 0.08
POLR1E-201ENST00000377792 MPHOSPH9Q99550 1183 aa15.52■□□□□ 0.08
POLR1E-201ENST00000377792 ABCC5O15440 1437 aa15.51■□□□□ 0.07
POLR1E-201ENST00000377792 CEP170Q5SW79 1584 aa15.51■□□□□ 0.07
POLR1E-201ENST00000377792 ZNF644Q9H582 1327 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms