RNA–Protein interactions for RNA: ENST00000377759.8

SNX5-201, Transcript of sorting nexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX5, Length 2,270 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-201ENST00000377759 LRRC9Q6ZRR7 1453 aa35.63■■■■□ 3.29
SNX5-201ENST00000377759 P3H3Q8IVL6 736 aa35.6■■■■□ 3.29
SNX5-201ENST00000377759 PDS5BQ9NTI5 1447 aa35.6■■■■□ 3.29
SNX5-201ENST00000377759 PCF11O94913 1555 aaKnown RBP35.58■■■■□ 3.29
SNX5-201ENST00000377759 FHOD3Q2V2M9 1422 aa35.56■■■■□ 3.28
SNX5-201ENST00000377759 EFCAB5A4FU69 1503 aa35.55■■■■□ 3.28
SNX5-201ENST00000377759 SCAF1Q9H7N4 1312 aaKnown RBP35.54■■■■□ 3.28
SNX5-201ENST00000377759 ABCA5Q8WWZ7 1642 aa35.54■■■■□ 3.28
SNX5-201ENST00000377759 CFAP43Q8NDM7 1665 aa35.53■■■■□ 3.28
SNX5-201ENST00000377759 TDRD9Q8NDG6 1382 aaKnown RBP35.53■■■■□ 3.28
SNX5-201ENST00000377759 CTTNBP2Q8WZ74 1663 aa35.52■■■■□ 3.28
SNX5-201ENST00000377759 PHLDB1Q86UU1 1377 aa35.49■■■■□ 3.27
SNX5-201ENST00000377759 KIF21AQ7Z4S6 1674 aa35.47■■■■□ 3.27
SNX5-201ENST00000377759 GAPVD1Q14C86 1478 aa35.46■■■■□ 3.27
SNX5-201ENST00000377759 ITGAEP38570 1179 aa35.45■■■■□ 3.27
SNX5-201ENST00000377759 FYCO1Q9BQS8 1478 aa35.45■■■■□ 3.27
SNX5-201ENST00000377759 AQRO60306 1485 aaKnown RBP eCLIP35.44■■■■□ 3.261e-7■■■■□ 21.1
SNX5-201ENST00000377759 CASKIN1Q8WXD9 1431 aa35.44■■■■□ 3.26
SNX5-201ENST00000377759 ACIN1Q9UKV3 1341 aaKnown RBP35.38■■■■□ 3.25
SNX5-201ENST00000377759 NEUROD1Q13562 356 aa35.36■■■■□ 3.25
SNX5-201ENST00000377759 ATP1B4Q9UN42 357 aaPredicted RBP35.36■■■■□ 3.25
SNX5-201ENST00000377759 RAB3GAP2Q9H2M9 1393 aa35.34■■■■□ 3.25
SNX5-201ENST00000377759 TARBP1Q13395 1621 aaKnown RBP35.34■■■■□ 3.25
SNX5-201ENST00000377759 FMN1Q68DA7 1419 aa35.31■■■■□ 3.24
SNX5-201ENST00000377759 SAMD9Q5K651 1589 aa35.29■■■■□ 3.24
SNX5-201ENST00000377759 SNAPC4Q5SXM2 1469 aa35.29■■■■□ 3.24
SNX5-201ENST00000377759 SETD5Q9C0A6 1442 aa35.24■■■■□ 3.23
SNX5-201ENST00000377759 FAM50AQ14320 339 aaKnown RBP35.22■■■■□ 3.23
SNX5-201ENST00000377759 MIER1Q8N108 512 aa35.22■■■■□ 3.23
SNX5-201ENST00000377759 CENPBP07199 599 aaPredicted RBP35.19■■■■□ 3.22
SNX5-201ENST00000377759 MAPKBP1O60336 1514 aa35.18■■■■□ 3.22
SNX5-201ENST00000377759 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.14■■■■□ 3.22
SNX5-201ENST00000377759 GRIN2BQ13224 1484 aa35.1■■■■□ 3.21
SNX5-201ENST00000377759 LRRIQ1Q96JM4 1722 aa35.09■■■■□ 3.21
SNX5-201ENST00000377759 MRC2Q9UBG0 1479 aa35.09■■■■□ 3.21
SNX5-201ENST00000377759 PBRM1Q86U86 1689 aa35.07■■■■□ 3.2
SNX5-201ENST00000377759 FGD6Q6ZV73 1430 aa35.04■■■■□ 3.2
SNX5-201ENST00000377759 MTUS2Q5JR59 1369 aa35.03■■■■□ 3.2
SNX5-201ENST00000377759 THOC2Q8NI27 1593 aaKnown RBP35.01■■■■□ 3.19
SNX5-201ENST00000377759 ADAMTS12P58397 1594 aa34.98■■■■□ 3.19
SNX5-201ENST00000377759 NCOA2Q15596 1464 aa34.92■■■■□ 3.18
SNX5-201ENST00000377759 YTHDC1Q96MU7 727 aaKnown RBP34.9■■■■□ 3.18
SNX5-201ENST00000377759 GTF3C3Q9Y5Q9 886 aa34.9■■■■□ 3.18
SNX5-201ENST00000377759 IQGAP2Q13576 1575 aa34.9■■■■□ 3.18
SNX5-201ENST00000377759 EHBP1L1Q8N3D4 1523 aa34.87■■■■□ 3.17
SNX5-201ENST00000377759 PTPRKQ15262 1439 aa34.87■■■■□ 3.17
SNX5-201ENST00000377759 MYOM3Q5VTT5 1437 aa34.86■■■■□ 3.17
SNX5-201ENST00000377759 ZNF608Q9ULD9 1512 aaPredicted RBP34.85■■■■□ 3.17
SNX5-201ENST00000377759 IFT140Q96RY7 1462 aa34.85■■■■□ 3.17
SNX5-201ENST00000377759 SIN3AQ96ST3 1273 aa34.84■■■■□ 3.17
SNX5-201ENST00000377759 MAGI3Q5TCQ9 1506 aa34.84■■■■□ 3.17
SNX5-201ENST00000377759 WDR62O43379 1518 aa34.84■■■■□ 3.17
SNX5-201ENST00000377759 SUPT6HQ7KZ85 1726 aaKnown RBP34.83■■■■□ 3.17
SNX5-201ENST00000377759 ARHGEF11O15085 1522 aa34.81■■■■□ 3.16
SNX5-201ENST00000377759 CCDC18Q5T9S5 1454 aa34.8■■■■□ 3.16
SNX5-201ENST00000377759 UGGT2Q9NYU1 1516 aa34.79■■■■□ 3.16
SNX5-201ENST00000377759 HFM1A2PYH4 1435 aa34.77■■■■□ 3.16
SNX5-201ENST00000377759 HECW1Q76N89 1606 aa34.75■■■■□ 3.15
SNX5-201ENST00000377759 EPRSP07814 1512 aaKnown RBP34.72■■■■□ 3.15
SNX5-201ENST00000377759 TIMELESSQ9UNS1 1208 aa34.7■■■■□ 3.15
SNX5-201ENST00000377759 PTPN23Q9H3S7 1636 aa34.7■■■■□ 3.15
SNX5-201ENST00000377759 NAIPQ13075 1403 aa34.67■■■■□ 3.14
SNX5-201ENST00000377759 KIAA0586Q9BVV6 1533 aa34.63■■■■□ 3.13
SNX5-201ENST00000377759 CDK13Q14004 1512 aaKnown RBP34.63■■■■□ 3.13
SNX5-201ENST00000377759 UACAQ9BZF9 1416 aa34.62■■■■□ 3.13
SNX5-201ENST00000377759 TCOF1Q13428 1488 aaKnown RBP34.62■■■■□ 3.13
SNX5-201ENST00000377759 EIF4G3O43432 1585 aaKnown RBP34.59■■■■□ 3.13
SNX5-201ENST00000377759 DISP1Q96F81 1524 aa34.58■■■■□ 3.13
SNX5-201ENST00000377759 PPP1R15AO75807 674 aaPredicted RBP34.56■■■■□ 3.12
SNX5-201ENST00000377759 GRIN2AQ12879 1464 aa34.56■■■■□ 3.12
SNX5-201ENST00000377759 KIAA0556O60303 1618 aa34.55■■■■□ 3.12
SNX5-201ENST00000377759 ARID3CA6NKF2 412 aa34.49■■■■□ 3.11
SNX5-201ENST00000377759 ERCC6Q03468 1493 aa34.49■■■■□ 3.11
SNX5-201ENST00000377759 MIA2Q96PC5 1412 aa34.48■■■■□ 3.11
SNX5-201ENST00000377759 RRP7BPQ9NSQ0 103 aa34.43■■■■□ 3.1
SNX5-201ENST00000377759 NUP153P49790 1475 aaKnown RBP34.42■■■■□ 3.1
SNX5-201ENST00000377759 MAGI1Q96QZ7 1491 aaPredicted RBP34.42■■■■□ 3.1
SNX5-201ENST00000377759 CHIC2Q9UKJ5 165 aa34.41■■■■□ 3.1
SNX5-201ENST00000377759 AKNAQ7Z591 1439 aa34.41■■■■□ 3.1
SNX5-201ENST00000377759 GCC2Q8IWJ2 1684 aa34.4■■■■□ 3.1
SNX5-201ENST00000377759 TONSLQ96HA7 1378 aa34.38■■■■□ 3.09
SNX5-201ENST00000377759 RAPGEF6Q8TEU7 1601 aa34.36■■■■□ 3.09
SNX5-201ENST00000377759 CEP170Q5SW79 1584 aa34.34■■■■□ 3.09
SNX5-201ENST00000377759 SYNJ2O15056 1496 aa34.34■■■■□ 3.09
SNX5-201ENST00000377759 DENND4BO75064 1496 aaPredicted RBP34.33■■■■□ 3.09
SNX5-201ENST00000377759 KDM6BO15054 1643 aa34.33■■■■□ 3.09
SNX5-201ENST00000377759 CHMP7Q8WUX9 453 aaPredicted RBP34.3■■■■□ 3.08
SNX5-201ENST00000377759 DDX10Q13206 875 aaKnown RBP34.3■■■■□ 3.08
SNX5-201ENST00000377759 KDM5BQ9UGL1 1544 aa34.28■■■■□ 3.08
SNX5-201ENST00000377759 PELP1Q8IZL8 1130 aaKnown RBP34.27■■■■□ 3.08
SNX5-201ENST00000377759 HIRIP3Q9BW71 556 aaPredicted RBP34.26■■■■□ 3.07
SNX5-201ENST00000377759 DAPK1P53355 1430 aa34.22■■■■□ 3.07
SNX5-201ENST00000377759 KCNH8Q96L42 1107 aa34.21■■■■□ 3.07
SNX5-201ENST00000377759 NUP160Q12769 1436 aa34.21■■■■□ 3.07
SNX5-201ENST00000377759 CDK11AQ9UQ88 783 aaPredicted RBP34.2■■■■□ 3.07
SNX5-201ENST00000377759 ABCC5O15440 1437 aa34.19■■■■□ 3.06
SNX5-201ENST00000377759 PLB1Q6P1J6 1458 aa34.19■■■■□ 3.06
SNX5-201ENST00000377759 TRIM52Q96A61 297 aa34.19■■■■□ 3.06
SNX5-201ENST00000377759 ZNF644Q9H582 1327 aaPredicted RBP34.19■■■■□ 3.06
SNX5-201ENST00000377759 ROCK1Q13464 1354 aa34.18■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms