RNA–Protein interactions for RNA: ENST00000377612.8

COMMD6-202, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-202ENST00000377612 TRHP20396 242 aaPredicted RBP31.01■■■□□ 2.55
COMMD6-202ENST00000377612 KIAA0586Q9BVV6 1533 aa31■■■□□ 2.55
COMMD6-202ENST00000377612 JPH4Q96JJ6 628 aa30.97■■■□□ 2.55
COMMD6-202ENST00000377612 KIF13AQ9H1H9 1805 aa30.95■■■□□ 2.55
COMMD6-202ENST00000377612 CARMIL1Q5VZK9 1371 aa30.94■■■□□ 2.54
COMMD6-202ENST00000377612 ADCY10Q96PN6 1610 aa30.91■■■□□ 2.54
COMMD6-202ENST00000377612 IQGAP2Q13576 1575 aa30.88■■■□□ 2.53
COMMD6-202ENST00000377612 CTTNBP2Q8WZ74 1663 aa30.82■■■□□ 2.52
COMMD6-202ENST00000377612 RAPGEF2Q9Y4G8 1499 aa30.77■■■□□ 2.52
COMMD6-202ENST00000377612 MAPKBP1O60336 1514 aa30.71■■■□□ 2.51
COMMD6-202ENST00000377612 DISP1Q96F81 1524 aa30.69■■■□□ 2.5
COMMD6-202ENST00000377612 UGGT2Q9NYU1 1516 aa30.67■■■□□ 2.5
COMMD6-202ENST00000377612 DIP2BQ9P265 1576 aa30.66■■■□□ 2.5
COMMD6-202ENST00000377612 KIAA0556O60303 1618 aa30.65■■■□□ 2.5
COMMD6-202ENST00000377612 PRXQ9BXM0 1461 aa30.59■■■□□ 2.49
COMMD6-202ENST00000377612 CARMIL2Q6F5E8 1435 aa30.59■■■□□ 2.49
COMMD6-202ENST00000377612 TNIKQ9UKE5 1360 aa30.57■■■□□ 2.48
COMMD6-202ENST00000377612 ABCC10Q5T3U5 1492 aa30.57■■■□□ 2.48
COMMD6-202ENST00000377612 PTPRGP23470 1445 aa30.56■■■□□ 2.48
COMMD6-202ENST00000377612 TSPOAP1O95153 1857 aa30.51■■■□□ 2.47
COMMD6-202ENST00000377612 ABCC2Q92887 1545 aa30.48■■■□□ 2.47
COMMD6-202ENST00000377612 UHRF1BP1LA0JNW5 1464 aa30.47■■■□□ 2.47
COMMD6-202ENST00000377612 TTBK1Q5TCY1 1321 aaPredicted RBP30.46■■■□□ 2.47
COMMD6-202ENST00000377612 ZCCHC11Q5TAX3 1644 aaKnown RBP30.44■■■□□ 2.46
COMMD6-202ENST00000377612 UACAQ9BZF9 1416 aa30.41■■■□□ 2.46
COMMD6-202ENST00000377612 NPM1P06748 294 aaKnown RBP eCLIP30.41■■■□□ 2.46
COMMD6-202ENST00000377612 PPRC1Q5VV67 1664 aaKnown RBP30.39■■■□□ 2.45
COMMD6-202ENST00000377612 FAM69CQ0P6D2 419 aa30.35■■■□□ 2.45
COMMD6-202ENST00000377612 KDM5BQ9UGL1 1544 aa30.35■■■□□ 2.45
COMMD6-202ENST00000377612 ASXL2Q76L83 1435 aa30.32■■■□□ 2.44
COMMD6-202ENST00000377612 ABCA8O94911 1581 aa30.32■■■□□ 2.44
COMMD6-202ENST00000377612 GOLGA3Q08378 1498 aa30.31■■■□□ 2.44
COMMD6-202ENST00000377612 GLI2P10070 1586 aa30.3■■■□□ 2.44
COMMD6-202ENST00000377612 SAMD9Q5K651 1589 aa30.29■■■□□ 2.44
COMMD6-202ENST00000377612 PLB1Q6P1J6 1458 aa30.29■■■□□ 2.44
COMMD6-202ENST00000377612 EEA1Q15075 1411 aa30.26■■■□□ 2.43
COMMD6-202ENST00000377612 KDM6BO15054 1643 aa30.25■■■□□ 2.43
COMMD6-202ENST00000377612 MAP3K4Q9Y6R4 1608 aa30.25■■■□□ 2.43
COMMD6-202ENST00000377612 CSRNP3Q8WYN3 585 aa30.23■■■□□ 2.43
COMMD6-202ENST00000377612 KIF21BO75037 1637 aa30.22■■■□□ 2.43
COMMD6-202ENST00000377612 EPRSP07814 1512 aaKnown RBP30.18■■■□□ 2.42
COMMD6-202ENST00000377612 WDR7Q9Y4E6 1490 aa30.11■■■□□ 2.41
COMMD6-202ENST00000377612 RAPGEF6Q8TEU7 1601 aa30.07■■■□□ 2.4
COMMD6-202ENST00000377612 CFAP43Q8NDM7 1665 aa30.06■■■□□ 2.4
COMMD6-202ENST00000377612 FAM9AQ8IZU1 332 aaPredicted RBP30.05■■■□□ 2.4
COMMD6-202ENST00000377612 CHIC1Q5VXU3 224 aa30■■■□□ 2.39
COMMD6-202ENST00000377612 P3H3Q8IVL6 736 aa30■■■□□ 2.39
COMMD6-202ENST00000377612 FHOD3Q2V2M9 1422 aa29.95■■■□□ 2.38
COMMD6-202ENST00000377612 EFCAB5A4FU69 1503 aa29.94■■■□□ 2.38
COMMD6-202ENST00000377612 ATP10BO94823 1461 aa29.93■■■□□ 2.38
COMMD6-202ENST00000377612 COL17A1Q9UMD9 1497 aaPredicted RBP29.93■■■□□ 2.38
COMMD6-202ENST00000377612 TEX14Q8IWB6 1497 aa29.91■■■□□ 2.38
COMMD6-202ENST00000377612 NUP153P49790 1475 aaKnown RBP29.88■■■□□ 2.37
COMMD6-202ENST00000377612 ABCA9Q8IUA7 1624 aa29.86■■■□□ 2.37
COMMD6-202ENST00000377612 MAGI3Q5TCQ9 1506 aa29.86■■■□□ 2.37
COMMD6-202ENST00000377612 ARID3CA6NKF2 412 aa29.85■■■□□ 2.37
COMMD6-202ENST00000377612 RANGAP1P46060 587 aaPredicted RBP29.84■■■□□ 2.37
COMMD6-202ENST00000377612 CD109Q6YHK3 1445 aa29.79■■■□□ 2.36
COMMD6-202ENST00000377612 AEBP2Q6ZN18 517 aaPredicted RBP29.77■■■□□ 2.36
COMMD6-202ENST00000377612 KCNH8Q96L42 1107 aa29.76■■■□□ 2.35
COMMD6-202ENST00000377612 EHMT2Q96KQ7 1210 aa29.73■■■□□ 2.35
COMMD6-202ENST00000377612 LRRIQ1Q96JM4 1722 aa29.73■■■□□ 2.35
COMMD6-202ENST00000377612 ARHGAP35Q9NRY4 1499 aa29.72■■■□□ 2.35
COMMD6-202ENST00000377612 CDK13Q14004 1512 aaKnown RBP29.68■■■□□ 2.34
COMMD6-202ENST00000377612 HECW1Q76N89 1606 aa29.64■■■□□ 2.34
COMMD6-202ENST00000377612 KDM4FA0A1W2PPD8 638 aa29.64■■■□□ 2.34
COMMD6-202ENST00000377612 TTC37Q6PGP7 1564 aa29.64■■■□□ 2.33
COMMD6-202ENST00000377612 UBTFP17480 764 aaKnown RBP29.61■■■□□ 2.33
COMMD6-202ENST00000377612 ARAP3Q8WWN8 1544 aa29.61■■■□□ 2.33
COMMD6-202ENST00000377612 FRMPD1Q5SYB0 1578 aa29.6■■■□□ 2.33
COMMD6-202ENST00000377612 ADGRL1O94910 1474 aa29.6■■■□□ 2.33
COMMD6-202ENST00000377612 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.58■■■□□ 2.33
COMMD6-202ENST00000377612 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.53■■■□□ 2.32
COMMD6-202ENST00000377612 HNRNPUL2Q1KMD3 747 aaKnown RBP29.53■■■□□ 2.32
COMMD6-202ENST00000377612 RICTORQ6R327 1708 aa29.53■■■□□ 2.32
COMMD6-202ENST00000377612 FMN1Q68DA7 1419 aa29.53■■■□□ 2.32
COMMD6-202ENST00000377612 NEO1Q92859 1461 aa29.52■■■□□ 2.32
COMMD6-202ENST00000377612 PCF11O94913 1555 aaKnown RBP29.52■■■□□ 2.32
COMMD6-202ENST00000377612 CFAP74Q9C0B2 1584 aa29.5■■■□□ 2.31
COMMD6-202ENST00000377612 KIF14Q15058 1648 aa29.49■■■□□ 2.31
COMMD6-202ENST00000377612 MYO5CQ9NQX4 1742 aa29.47■■■□□ 2.31
COMMD6-202ENST00000377612 PLEKHD1A6NEE1 506 aa29.41■■■□□ 2.3
COMMD6-202ENST00000377612 PHLDB1Q86UU1 1377 aa29.4■■■□□ 2.3
COMMD6-202ENST00000377612 FANCAO15360 1455 aa29.37■■■□□ 2.29
COMMD6-202ENST00000377612 ARHGEF40Q8TER5 1519 aa29.36■■■□□ 2.29
COMMD6-202ENST00000377612 SIGLEC1Q9BZZ2 1709 aa29.33■■■□□ 2.29
COMMD6-202ENST00000377612 AKNAQ7Z591 1439 aa29.32■■■□□ 2.28
COMMD6-202ENST00000377612 RAPGEF3O95398 923 aa29.32■■■□□ 2.28
COMMD6-202ENST00000377612 CDC42BPBQ9Y5S2 1711 aa29.31■■■□□ 2.28
COMMD6-202ENST00000377612 ZMYM4Q5VZL5 1548 aa29.31■■■□□ 2.28
COMMD6-202ENST00000377612 CASKIN1Q8WXD9 1431 aa29.3■■■□□ 2.28
COMMD6-202ENST00000377612 ADAMTSL3P82987 1691 aa29.3■■■□□ 2.28
COMMD6-202ENST00000377612 TROQ12816 1431 aaPredicted RBP29.29■■■□□ 2.28
COMMD6-202ENST00000377612 BCORL1Q5H9F3 1711 aa29.28■■■□□ 2.28
COMMD6-202ENST00000377612 DENND4BO75064 1496 aaPredicted RBP29.28■■■□□ 2.28
COMMD6-202ENST00000377612 ATP1B4Q9UN42 357 aaPredicted RBP29.27■■■□□ 2.28
COMMD6-202ENST00000377612 FYCO1Q9BQS8 1478 aa29.26■■■□□ 2.27
COMMD6-202ENST00000377612 CLIP1P30622 1438 aa29.26■■■□□ 2.27
COMMD6-202ENST00000377612 CCDC18Q5T9S5 1454 aa29.25■■■□□ 2.27
COMMD6-202ENST00000377612 PREX2Q70Z35 1606 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms