RNA–Protein interactions for RNA: ENST00000377465.5

SEC23B-203, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-203ENST00000377465 SYNJ2O15056 1496 aa17.09■□□□□ 0.33
SEC23B-203ENST00000377465 TDRD9Q8NDG6 1382 aaKnown RBP17.08■□□□□ 0.33
SEC23B-203ENST00000377465 UGGT2Q9NYU1 1516 aa17.08■□□□□ 0.33
SEC23B-203ENST00000377465 ARHGAP35Q9NRY4 1499 aa17.08■□□□□ 0.32
SEC23B-203ENST00000377465 AQRO60306 1485 aaKnown RBP eCLIP17.08■□□□□ 0.32
SEC23B-203ENST00000377465 PPARGC1BQ86YN6 1023 aaKnown RBP17.08■□□□□ 0.32
SEC23B-203ENST00000377465 VPS8Q8N3P4 1428 aa17.07■□□□□ 0.32
SEC23B-203ENST00000377465 SNAPC4Q5SXM2 1469 aa17.06■□□□□ 0.32
SEC23B-203ENST00000377465 GRIN2AQ12879 1464 aa17.06■□□□□ 0.32
SEC23B-203ENST00000377465 IQGAP2Q13576 1575 aa17.05■□□□□ 0.32
SEC23B-203ENST00000377465 NUP160Q12769 1436 aa17.04■□□□□ 0.32
SEC23B-203ENST00000377465 CFAP43Q8NDM7 1665 aa17.02■□□□□ 0.31
SEC23B-203ENST00000377465 CEP170Q5SW79 1584 aa17■□□□□ 0.31
SEC23B-203ENST00000377465 SHROOM2Q13796 1616 aa17■□□□□ 0.31
SEC23B-203ENST00000377465 KIAA0586Q9BVV6 1533 aa17■□□□□ 0.31
SEC23B-203ENST00000377465 PCGF6Q9BYE7 350 aa16.98■□□□□ 0.31
SEC23B-203ENST00000377465 CHD1O14646 1710 aa16.96■□□□□ 0.31
SEC23B-203ENST00000377465 KIAA0556O60303 1618 aa16.93■□□□□ 0.3
SEC23B-203ENST00000377465 FYCO1Q9BQS8 1478 aa16.92■□□□□ 0.3
SEC23B-203ENST00000377465 UBTFP17480 764 aaKnown RBP16.92■□□□□ 0.3
SEC23B-203ENST00000377465 CLASP1Q7Z460 1538 aa16.89■□□□□ 0.29
SEC23B-203ENST00000377465 LRRIQ1Q96JM4 1722 aa16.89■□□□□ 0.29
SEC23B-203ENST00000377465 PCF11O94913 1555 aaKnown RBP16.88■□□□□ 0.29
SEC23B-203ENST00000377465 DISP1Q96F81 1524 aa16.87■□□□□ 0.29
SEC23B-203ENST00000377465 CASKIN1Q8WXD9 1431 aa16.87■□□□□ 0.29
SEC23B-203ENST00000377465 SCAF1Q9H7N4 1312 aaKnown RBP16.87■□□□□ 0.29
SEC23B-203ENST00000377465 TIAM1Q13009 1591 aa16.87■□□□□ 0.29
SEC23B-203ENST00000377465 FMN1Q68DA7 1419 aa16.84■□□□□ 0.29
SEC23B-203ENST00000377465 HECW1Q76N89 1606 aa16.81■□□□□ 0.28
SEC23B-203ENST00000377465 CCDC18Q5T9S5 1454 aa16.76■□□□□ 0.27
SEC23B-203ENST00000377465 RAPGEF6Q8TEU7 1601 aa16.74■□□□□ 0.27
SEC23B-203ENST00000377465 ABCA8O94911 1581 aa16.73■□□□□ 0.27
SEC23B-203ENST00000377465 ARHGEF11O15085 1522 aa16.73■□□□□ 0.27
SEC23B-203ENST00000377465 FHOD3Q2V2M9 1422 aa16.71■□□□□ 0.27
SEC23B-203ENST00000377465 ADCY10Q96PN6 1610 aa16.71■□□□□ 0.27
SEC23B-203ENST00000377465 LRRC9Q6ZRR7 1453 aa16.7■□□□□ 0.26
SEC23B-203ENST00000377465 TRIM26Q12899 539 aaPredicted RBP16.68■□□□□ 0.26
SEC23B-203ENST00000377465 EHBP1L1Q8N3D4 1523 aa16.68■□□□□ 0.26
SEC23B-203ENST00000377465 RRBP1Q9P2E9 1410 aaKnown RBP16.66■□□□□ 0.26
SEC23B-203ENST00000377465 CARMIL2Q6F5E8 1435 aa16.64■□□□□ 0.25
SEC23B-203ENST00000377465 TTBK1Q5TCY1 1321 aaPredicted RBP16.62■□□□□ 0.25
SEC23B-203ENST00000377465 CHMP7Q8WUX9 453 aaPredicted RBP16.62■□□□□ 0.25
SEC23B-203ENST00000377465 SUPT6HQ7KZ85 1726 aaKnown RBP16.62■□□□□ 0.25
SEC23B-203ENST00000377465 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.62■□□□□ 0.25
SEC23B-203ENST00000377465 EPRSP07814 1512 aaKnown RBP16.61■□□□□ 0.25
SEC23B-203ENST00000377465 UHRF1BP1LA0JNW5 1464 aa16.6■□□□□ 0.25
SEC23B-203ENST00000377465 NUP153P49790 1475 aaKnown RBP16.6■□□□□ 0.25
SEC23B-203ENST00000377465 MAGI3Q5TCQ9 1506 aa16.57■□□□□ 0.24
SEC23B-203ENST00000377465 JPH4Q96JJ6 628 aa16.52■□□□□ 0.23
SEC23B-203ENST00000377465 PRG4Q92954 1404 aaPredicted RBP16.52■□□□□ 0.23
SEC23B-203ENST00000377465 ABCC2Q92887 1545 aa16.51■□□□□ 0.23
SEC23B-203ENST00000377465 TCOF1Q13428 1488 aaKnown RBP16.51■□□□□ 0.23
SEC23B-203ENST00000377465 RANGAP1P46060 587 aaPredicted RBP16.5■□□□□ 0.23
SEC23B-203ENST00000377465 ITSN2Q9NZM3 1697 aa16.49■□□□□ 0.23
SEC23B-203ENST00000377465 ERCC6L2Q5T890 1561 aa16.48■□□□□ 0.23
SEC23B-203ENST00000377465 KDM5BQ9UGL1 1544 aa16.47■□□□□ 0.23
SEC23B-203ENST00000377465 KANK4Q5T7N3 995 aaPredicted RBP16.44■□□□□ 0.22
SEC23B-203ENST00000377465 CDK13Q14004 1512 aaKnown RBP16.44■□□□□ 0.22
SEC23B-203ENST00000377465 NCOA2Q15596 1464 aa16.44■□□□□ 0.22
SEC23B-203ENST00000377465 PLB1Q6P1J6 1458 aa16.44■□□□□ 0.22
SEC23B-203ENST00000377465 MIA2Q96PC5 1412 aa16.43■□□□□ 0.22
SEC23B-203ENST00000377465 UACAQ9BZF9 1416 aa16.42■□□□□ 0.22
SEC23B-203ENST00000377465 APLP2Q06481 763 aa16.42■□□□□ 0.22
SEC23B-203ENST00000377465 ZCCHC11Q5TAX3 1644 aaKnown RBP16.42■□□□□ 0.22
SEC23B-203ENST00000377465 TROQ12816 1431 aaPredicted RBP16.41■□□□□ 0.22
SEC23B-203ENST00000377465 ATP10BO94823 1461 aa16.4■□□□□ 0.22
SEC23B-203ENST00000377465 KIF14Q15058 1648 aa16.4■□□□□ 0.22
SEC23B-203ENST00000377465 MYOM3Q5VTT5 1437 aa16.4■□□□□ 0.22
SEC23B-203ENST00000377465 PTPN23Q9H3S7 1636 aa16.4■□□□□ 0.22
SEC23B-203ENST00000377465 ABCC10Q5T3U5 1492 aa16.4■□□□□ 0.22
SEC23B-203ENST00000377465 PHLDB1Q86UU1 1377 aa16.39■□□□□ 0.21
SEC23B-203ENST00000377465 CDC42BPAQ5VT25 1732 aa16.39■□□□□ 0.21
SEC23B-203ENST00000377465 CROCC2H7BZ55 1655 aa16.39■□□□□ 0.21
SEC23B-203ENST00000377465 PTPRGP23470 1445 aa16.38■□□□□ 0.21
SEC23B-203ENST00000377465 CCNB3Q8WWL7 1395 aa16.38■□□□□ 0.21
SEC23B-203ENST00000377465 FGD6Q6ZV73 1430 aa16.37■□□□□ 0.21
SEC23B-203ENST00000377465 ARAP3Q8WWN8 1544 aa16.37■□□□□ 0.21
SEC23B-203ENST00000377465 PREX2Q70Z35 1606 aa16.37■□□□□ 0.21
SEC23B-203ENST00000377465 AKNAQ7Z591 1439 aa16.36■□□□□ 0.21
SEC23B-203ENST00000377465 GCC2Q8IWJ2 1684 aa16.35■□□□□ 0.21
SEC23B-203ENST00000377465 DNMT1P26358 1616 aaKnown RBP16.34■□□□□ 0.21
SEC23B-203ENST00000377465 P3H3Q8IVL6 736 aa16.33■□□□□ 0.21
SEC23B-203ENST00000377465 MTUS2Q5JR59 1369 aa16.32■□□□□ 0.2
SEC23B-203ENST00000377465 ACIN1Q9UKV3 1341 aaKnown RBP16.31■□□□□ 0.2
SEC23B-203ENST00000377465 ZEB1P37275 1124 aaPredicted RBP16.31■□□□□ 0.2
SEC23B-203ENST00000377465 FBLN2P98095 1184 aa16.31■□□□□ 0.2
SEC23B-203ENST00000377465 ADGBQ8N7X0 1667 aa16.31■□□□□ 0.2
SEC23B-203ENST00000377465 CDC42BPBQ9Y5S2 1711 aa16.3■□□□□ 0.2
SEC23B-203ENST00000377465 ARHGEF5Q12774 1597 aa16.3■□□□□ 0.2
SEC23B-203ENST00000377465 MYO5CQ9NQX4 1742 aa16.29■□□□□ 0.2
SEC23B-203ENST00000377465 ABCA9Q8IUA7 1624 aa16.27■□□□□ 0.2
SEC23B-203ENST00000377465 GPATCH8Q9UKJ3 1502 aaKnown RBP16.26■□□□□ 0.19
SEC23B-203ENST00000377465 MAST1Q9Y2H9 1570 aa16.26■□□□□ 0.19
SEC23B-203ENST00000377465 SHANK2Q9UPX8 1470 aa16.25■□□□□ 0.19
SEC23B-203ENST00000377465 OSCARQ8IYS5 282 aa16.24■□□□□ 0.19
SEC23B-203ENST00000377465 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.24■□□□□ 0.19
SEC23B-203ENST00000377465 CDK11AQ9UQ88 783 aaPredicted RBP16.24■□□□□ 0.19
SEC23B-203ENST00000377465 TTC37Q6PGP7 1564 aa16.23■□□□□ 0.19
SEC23B-203ENST00000377465 ADGRL2O95490 1459 aa16.23■□□□□ 0.19
SEC23B-203ENST00000377465 MAPKBP1O60336 1514 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms