RNA–Protein interactions for RNA: ENST00000376745.8

PPP1CA-203, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CA, Length 1,476 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-203ENST00000376745 PRXQ9BXM0 1461 aa55.45■■■■■ 6.47
PPP1CA-203ENST00000376745 KIAA0586Q9BVV6 1533 aa55.34■■■■■ 6.45
PPP1CA-203ENST00000376745 SHROOM2Q13796 1616 aa55.3■■■■■ 6.44
PPP1CA-203ENST00000376745 FAM9AQ8IZU1 332 aaPredicted RBP55.28■■■■■ 6.44
PPP1CA-203ENST00000376745 JPH4Q96JJ6 628 aa55.23■■■■■ 6.43
PPP1CA-203ENST00000376745 ARAP1Q96P48 1450 aa55.11■■■■■ 6.41
PPP1CA-203ENST00000376745 ERCC6L2Q5T890 1561 aa55.08■■■■■ 6.41
PPP1CA-203ENST00000376745 PRG4Q92954 1404 aaPredicted RBP55.07■■■■■ 6.41
PPP1CA-203ENST00000376745 IQGAP2Q13576 1575 aa55.03■■■■■ 6.4
PPP1CA-203ENST00000376745 CYB5RLQ6IPT4 315 aa54.98■■■■■ 6.39
PPP1CA-203ENST00000376745 KIF21BO75037 1637 aa54.94■■■■■ 6.39
PPP1CA-203ENST00000376745 CTTNBP2Q8WZ74 1663 aa54.89■■■■■ 6.38
PPP1CA-203ENST00000376745 UGGT2Q9NYU1 1516 aa54.79■■■■■ 6.36
PPP1CA-203ENST00000376745 CARMIL2Q6F5E8 1435 aa54.69■■■■■ 6.35
PPP1CA-203ENST00000376745 DISP1Q96F81 1524 aa54.67■■■■■ 6.34
PPP1CA-203ENST00000376745 GOLGA3Q08378 1498 aa54.63■■■■■ 6.34
PPP1CA-203ENST00000376745 TNIKQ9UKE5 1360 aa54.51■■■■■ 6.32
PPP1CA-203ENST00000376745 KIAA0556O60303 1618 aa54.51■■■■■ 6.32
PPP1CA-203ENST00000376745 EHMT2Q96KQ7 1210 aa54.49■■■■■ 6.31
PPP1CA-203ENST00000376745 PTPRGP23470 1445 aa54.45■■■■■ 6.31
PPP1CA-203ENST00000376745 UBTFP17480 764 aaKnown RBP54.44■■■■■ 6.31
PPP1CA-203ENST00000376745 SAMD9Q5K651 1589 aa54.29■■■■■ 6.28
PPP1CA-203ENST00000376745 TTBK1Q5TCY1 1321 aaPredicted RBP54.27■■■■■ 6.28
PPP1CA-203ENST00000376745 RANGAP1P46060 587 aaPredicted RBP54.18■■■■■ 6.26
PPP1CA-203ENST00000376745 ADCY10Q96PN6 1610 aa54.17■■■■■ 6.26
PPP1CA-203ENST00000376745 P3H3Q8IVL6 736 aa54.15■■■■■ 6.26
PPP1CA-203ENST00000376745 UACAQ9BZF9 1416 aa54.11■■■■■ 6.25
PPP1CA-203ENST00000376745 EFCAB5A4FU69 1503 aa54.09■■■■■ 6.25
PPP1CA-203ENST00000376745 UHRF1BP1LA0JNW5 1464 aa54.07■■■■■ 6.25
PPP1CA-203ENST00000376745 ABCC2Q92887 1545 aa53.99■■■■■ 6.23
PPP1CA-203ENST00000376745 PLB1Q6P1J6 1458 aa53.97■■■■■ 6.23
PPP1CA-203ENST00000376745 FHOD3Q2V2M9 1422 aa53.96■■■■■ 6.23
PPP1CA-203ENST00000376745 NPM1P06748 294 aaKnown RBP eCLIP53.93■■■■■ 6.22
PPP1CA-203ENST00000376745 ABCA8O94911 1581 aa53.92■■■■■ 6.22
PPP1CA-203ENST00000376745 ARHGAP35Q9NRY4 1499 aa53.91■■■■■ 6.22
PPP1CA-203ENST00000376745 KDM5BQ9UGL1 1544 aa53.81■■■■■ 6.2
PPP1CA-203ENST00000376745 LOC105371045A0A1W2PR82 267 aa53.8■■■■■ 6.2
PPP1CA-203ENST00000376745 MAPKBP1O60336 1514 aa53.79■■■■■ 6.2
PPP1CA-203ENST00000376745 TRHP20396 242 aaPredicted RBP53.68■■■■■ 6.18
PPP1CA-203ENST00000376745 CLIP1P30622 1438 aa53.67■■■■■ 6.18
PPP1CA-203ENST00000376745 RAPGEF6Q8TEU7 1601 aa53.66■■■■■ 6.18
PPP1CA-203ENST00000376745 ZCCHC11Q5TAX3 1644 aaKnown RBP53.63■■■■■ 6.18
PPP1CA-203ENST00000376745 FMN1Q68DA7 1419 aa53.6■■■■■ 6.17
PPP1CA-203ENST00000376745 ASXL2Q76L83 1435 aa53.54■■■■■ 6.16
PPP1CA-203ENST00000376745 NUP153P49790 1475 aaKnown RBP53.52■■■■■ 6.16
PPP1CA-203ENST00000376745 CEP162Q5TB80 1403 aa53.51■■■■■ 6.16
PPP1CA-203ENST00000376745 ATP10BO94823 1461 aa53.5■■■■■ 6.15
PPP1CA-203ENST00000376745 ABCC10Q5T3U5 1492 aa53.5■■■■■ 6.15
PPP1CA-203ENST00000376745 ARID3CA6NKF2 412 aa53.42■■■■■ 6.14
PPP1CA-203ENST00000376745 DIP2BQ9P265 1576 aa53.39■■■■■ 6.14
PPP1CA-203ENST00000376745 KIF13AQ9H1H9 1805 aa53.38■■■■■ 6.14
PPP1CA-203ENST00000376745 FAM69CQ0P6D2 419 aa53.34■■■■■ 6.13
PPP1CA-203ENST00000376745 WDR7Q9Y4E6 1490 aa53.32■■■■■ 6.13
PPP1CA-203ENST00000376745 HECW1Q76N89 1606 aa53.25■■■■■ 6.12
PPP1CA-203ENST00000376745 CASKIN1Q8WXD9 1431 aa53.24■■■■■ 6.11
PPP1CA-203ENST00000376745 EPRSP07814 1512 aaKnown RBP53.24■■■■■ 6.11
PPP1CA-203ENST00000376745 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP53.2■■■■■ 6.11
PPP1CA-203ENST00000376745 HNRNPUL2Q1KMD3 747 aaKnown RBP53.2■■■■■ 6.11
PPP1CA-203ENST00000376745 GLI2P10070 1586 aa53.2■■■■■ 6.11
PPP1CA-203ENST00000376745 ATP1B4Q9UN42 357 aaPredicted RBP53.18■■■■■ 6.1
PPP1CA-203ENST00000376745 PCF11O94913 1555 aaKnown RBP53.17■■■■■ 6.1
PPP1CA-203ENST00000376745 CDK13Q14004 1512 aaKnown RBP53.14■■■■■ 6.1
PPP1CA-203ENST00000376745 FYCO1Q9BQS8 1478 aa53.1■■■■■ 6.09
PPP1CA-203ENST00000376745 KCNH8Q96L42 1107 aa53.07■■■■■ 6.09
PPP1CA-203ENST00000376745 PLEKHD1A6NEE1 506 aa53.03■■■■■ 6.08
PPP1CA-203ENST00000376745 LRRIQ1Q96JM4 1722 aa53.03■■■■■ 6.08
PPP1CA-203ENST00000376745 CCDC18Q5T9S5 1454 aa52.95■■■■■ 6.07
PPP1CA-203ENST00000376745 MAP3K4Q9Y6R4 1608 aa52.94■■■■■ 6.07
PPP1CA-203ENST00000376745 CDK11AQ9UQ88 783 aaPredicted RBP52.88■■■■■ 6.06
PPP1CA-203ENST00000376745 VPS8Q8N3P4 1428 aa52.86■■■■■ 6.05
PPP1CA-203ENST00000376745 TSPOAP1O95153 1857 aa52.84■■■■■ 6.05
PPP1CA-203ENST00000376745 CFAP43Q8NDM7 1665 aa52.82■■■■■ 6.05
PPP1CA-203ENST00000376745 PPRC1Q5VV67 1664 aaKnown RBP52.81■■■■■ 6.04
PPP1CA-203ENST00000376745 ABCA9Q8IUA7 1624 aa52.81■■■■■ 6.04
PPP1CA-203ENST00000376745 CD109Q6YHK3 1445 aa52.8■■■■■ 6.04
PPP1CA-203ENST00000376745 TROQ12816 1431 aaPredicted RBP52.75■■■■■ 6.03
PPP1CA-203ENST00000376745 MAGI3Q5TCQ9 1506 aa52.71■■■■■ 6.03
PPP1CA-203ENST00000376745 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP52.67■■■■■ 6.02
PPP1CA-203ENST00000376745 TEX14Q8IWB6 1497 aa52.66■■■■■ 6.02
PPP1CA-203ENST00000376745 TTC37Q6PGP7 1564 aa52.57■■■■■ 6.01
PPP1CA-203ENST00000376745 KIF14Q15058 1648 aa52.56■■■■■ 6
PPP1CA-203ENST00000376745 TIAM1Q13009 1591 aa52.43■■■■■ 5.98
PPP1CA-203ENST00000376745 MTUS2Q5JR59 1369 aa52.42■■■■■ 5.98
PPP1CA-203ENST00000376745 KDM6BO15054 1643 aa52.41■■■■■ 5.98
PPP1CA-203ENST00000376745 PLCH2O75038 1416 aa52.39■■■■■ 5.98
PPP1CA-203ENST00000376745 MAP3K1Q13233 1512 aa52.39■■■■■ 5.98
PPP1CA-203ENST00000376745 COL17A1Q9UMD9 1497 aaPredicted RBP52.36■■■■■ 5.97
PPP1CA-203ENST00000376745 NEO1Q92859 1461 aa52.35■■■■■ 5.97
PPP1CA-203ENST00000376745 PHLDB1Q86UU1 1377 aa52.34■■■■■ 5.97
PPP1CA-203ENST00000376745 EHBP1L1Q8N3D4 1523 aa52.34■■■■■ 5.97
PPP1CA-203ENST00000376745 ARAP3Q8WWN8 1544 aa52.29■■■■■ 5.96
PPP1CA-203ENST00000376745 MYO5CQ9NQX4 1742 aa52.29■■■■■ 5.96
PPP1CA-203ENST00000376745 FANCAO15360 1455 aa52.28■■■■■ 5.96
PPP1CA-203ENST00000376745 LRRC9Q6ZRR7 1453 aa52.24■■■■■ 5.95
PPP1CA-203ENST00000376745 AKNAQ7Z591 1439 aa52.18■■■■■ 5.94
PPP1CA-203ENST00000376745 CFAP74Q9C0B2 1584 aa52.18■■■■■ 5.94
PPP1CA-203ENST00000376745 KANK4Q5T7N3 995 aaPredicted RBP52.18■■■■■ 5.94
PPP1CA-203ENST00000376745 APLP2Q06481 763 aa52.16■■■■■ 5.94
PPP1CA-203ENST00000376745 EFCAB2Q5VUJ9 269 aa52.16■■■■■ 5.94
PPP1CA-203ENST00000376745 PREX2Q70Z35 1606 aa52.14■■■■■ 5.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms