RNA–Protein interactions for RNA: ENST00000376626.5

VSTM1-203, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM1, Length 922 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-203ENST00000376626 FAM9AQ8IZU1 332 aaPredicted RBP16.12■□□□□ 0.17
VSTM1-203ENST00000376626 RAPGEF2Q9Y4G8 1499 aa16.11■□□□□ 0.17
VSTM1-203ENST00000376626 EEA1Q15075 1411 aa16.11■□□□□ 0.17
VSTM1-203ENST00000376626 CSRNP3Q8WYN3 585 aa16.09■□□□□ 0.17
VSTM1-203ENST00000376626 KIAA0586Q9BVV6 1533 aa16.05■□□□□ 0.16
VSTM1-203ENST00000376626 JPH4Q96JJ6 628 aa16.04■□□□□ 0.16
VSTM1-203ENST00000376626 SHROOM2Q13796 1616 aa16.04■□□□□ 0.16
VSTM1-203ENST00000376626 PRXQ9BXM0 1461 aa16.03■□□□□ 0.16
VSTM1-203ENST00000376626 CYB5RLQ6IPT4 315 aa16.03■□□□□ 0.16
VSTM1-203ENST00000376626 ARAP1Q96P48 1450 aa16.02■□□□□ 0.15
VSTM1-203ENST00000376626 PRG4Q92954 1404 aaPredicted RBP16.01■□□□□ 0.15
VSTM1-203ENST00000376626 IQGAP2Q13576 1575 aa16■□□□□ 0.15
VSTM1-203ENST00000376626 ERCC6L2Q5T890 1561 aa16■□□□□ 0.15
VSTM1-203ENST00000376626 CTTNBP2Q8WZ74 1663 aa15.99■□□□□ 0.15
VSTM1-203ENST00000376626 LOC105371045A0A1W2PR82 267 aa15.99■□□□□ 0.15
VSTM1-203ENST00000376626 EHMT2Q96KQ7 1210 aa15.95■□□□□ 0.14
VSTM1-203ENST00000376626 KIF21BO75037 1637 aa15.94■□□□□ 0.14
VSTM1-203ENST00000376626 CARMIL2Q6F5E8 1435 aa15.93■□□□□ 0.14
VSTM1-203ENST00000376626 TTBK1Q5TCY1 1321 aaPredicted RBP15.9■□□□□ 0.14
VSTM1-203ENST00000376626 UGGT2Q9NYU1 1516 aa15.89■□□□□ 0.13
VSTM1-203ENST00000376626 UBTFP17480 764 aaKnown RBP15.87■□□□□ 0.13
VSTM1-203ENST00000376626 GOLGA3Q08378 1498 aa15.86■□□□□ 0.13
VSTM1-203ENST00000376626 RANGAP1P46060 587 aaPredicted RBP15.86■□□□□ 0.13
VSTM1-203ENST00000376626 DISP1Q96F81 1524 aa15.84■□□□□ 0.13
VSTM1-203ENST00000376626 KIAA0556O60303 1618 aa15.84■□□□□ 0.13
VSTM1-203ENST00000376626 TNIKQ9UKE5 1360 aa15.84■□□□□ 0.13
VSTM1-203ENST00000376626 PTPRGP23470 1445 aa15.83■□□□□ 0.12
VSTM1-203ENST00000376626 P3H3Q8IVL6 736 aa15.79■□□□□ 0.12
VSTM1-203ENST00000376626 FOXD1Q16676 465 aa15.77■□□□□ 0.12
VSTM1-203ENST00000376626 NPM1P06748 294 aaKnown RBP eCLIP15.76■□□□□ 0.11
VSTM1-203ENST00000376626 ADCY10Q96PN6 1610 aa15.75■□□□□ 0.11
VSTM1-203ENST00000376626 TRHP20396 242 aaPredicted RBP15.74■□□□□ 0.11
VSTM1-203ENST00000376626 SAMD9Q5K651 1589 aa15.74■□□□□ 0.11
VSTM1-203ENST00000376626 UACAQ9BZF9 1416 aa15.71■□□□□ 0.11
VSTM1-203ENST00000376626 EFCAB5A4FU69 1503 aa15.7■□□□□ 0.1
VSTM1-203ENST00000376626 ABCC2Q92887 1545 aa15.68■□□□□ 0.1
VSTM1-203ENST00000376626 FHOD3Q2V2M9 1422 aa15.68■□□□□ 0.1
VSTM1-203ENST00000376626 UHRF1BP1LA0JNW5 1464 aa15.67■□□□□ 0.1
VSTM1-203ENST00000376626 PLB1Q6P1J6 1458 aa15.67■□□□□ 0.1
VSTM1-203ENST00000376626 PCGF6Q9BYE7 350 aa15.67■□□□□ 0.1
VSTM1-203ENST00000376626 ABCA8O94911 1581 aa15.64■□□□□ 0.09
VSTM1-203ENST00000376626 ARHGAP35Q9NRY4 1499 aa15.62■□□□□ 0.09
VSTM1-203ENST00000376626 ZCCHC11Q5TAX3 1644 aaKnown RBP15.61■□□□□ 0.09
VSTM1-203ENST00000376626 RAPGEF6Q8TEU7 1601 aa15.61■□□□□ 0.09
VSTM1-203ENST00000376626 MAPKBP1O60336 1514 aa15.61■□□□□ 0.09
VSTM1-203ENST00000376626 ARID3CA6NKF2 412 aa15.6■□□□□ 0.09
VSTM1-203ENST00000376626 KDM5BQ9UGL1 1544 aa15.59■□□□□ 0.09
VSTM1-203ENST00000376626 HRCP23327 699 aa15.59■□□□□ 0.09
VSTM1-203ENST00000376626 CLIP1P30622 1438 aa15.59■□□□□ 0.09
VSTM1-203ENST00000376626 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.57■□□□□ 0.08
VSTM1-203ENST00000376626 TRIM26Q12899 539 aaPredicted RBP15.57■□□□□ 0.08
VSTM1-203ENST00000376626 HNRNPUL2Q1KMD3 747 aaKnown RBP15.57■□□□□ 0.08
VSTM1-203ENST00000376626 ATP1B4Q9UN42 357 aaPredicted RBP15.57■□□□□ 0.08
VSTM1-203ENST00000376626 FMN1Q68DA7 1419 aa15.57■□□□□ 0.08
VSTM1-203ENST00000376626 ASXL2Q76L83 1435 aa15.57■□□□□ 0.08
VSTM1-203ENST00000376626 FAM69CQ0P6D2 419 aa15.55■□□□□ 0.08
VSTM1-203ENST00000376626 KIF13AQ9H1H9 1805 aa15.54■□□□□ 0.08
VSTM1-203ENST00000376626 ABCC10Q5T3U5 1492 aa15.53■□□□□ 0.08
VSTM1-203ENST00000376626 CEP162Q5TB80 1403 aa15.53■□□□□ 0.08
VSTM1-203ENST00000376626 DIP2BQ9P265 1576 aa15.53■□□□□ 0.08
VSTM1-203ENST00000376626 ATP10BO94823 1461 aa15.52■□□□□ 0.07
VSTM1-203ENST00000376626 NUP153P49790 1475 aaKnown RBP15.52■□□□□ 0.07
VSTM1-203ENST00000376626 HECW1Q76N89 1606 aa15.5■□□□□ 0.07
VSTM1-203ENST00000376626 WDR7Q9Y4E6 1490 aa15.5■□□□□ 0.07
VSTM1-203ENST00000376626 KCNH8Q96L42 1107 aa15.49■□□□□ 0.07
VSTM1-203ENST00000376626 TSPOAP1O95153 1857 aa15.47■□□□□ 0.07
VSTM1-203ENST00000376626 PCF11O94913 1555 aaKnown RBP15.46■□□□□ 0.07
VSTM1-203ENST00000376626 EPRSP07814 1512 aaKnown RBP15.46■□□□□ 0.07
VSTM1-203ENST00000376626 CDK13Q14004 1512 aaKnown RBP15.45■□□□□ 0.06
VSTM1-203ENST00000376626 PLEKHD1A6NEE1 506 aa15.44■□□□□ 0.06
VSTM1-203ENST00000376626 GLI2P10070 1586 aa15.44■□□□□ 0.06
VSTM1-203ENST00000376626 CASKIN1Q8WXD9 1431 aa15.43■□□□□ 0.06
VSTM1-203ENST00000376626 PLPPR3Q6T4P5 718 aa15.43■□□□□ 0.06
VSTM1-203ENST00000376626 FYCO1Q9BQS8 1478 aa15.41■□□□□ 0.06
VSTM1-203ENST00000376626 CDK11AQ9UQ88 783 aaPredicted RBP15.41■□□□□ 0.06
VSTM1-203ENST00000376626 LRRIQ1Q96JM4 1722 aa15.4■□□□□ 0.06
VSTM1-203ENST00000376626 CCDC18Q5T9S5 1454 aa15.39■□□□□ 0.05
VSTM1-203ENST00000376626 MAP3K4Q9Y6R4 1608 aa15.39■□□□□ 0.05
VSTM1-203ENST00000376626 CFAP43Q8NDM7 1665 aa15.38■□□□□ 0.05
VSTM1-203ENST00000376626 CD109Q6YHK3 1445 aa15.36■□□□□ 0.05
VSTM1-203ENST00000376626 TEX14Q8IWB6 1497 aa15.34■□□□□ 0.05
VSTM1-203ENST00000376626 ABCA9Q8IUA7 1624 aa15.34■□□□□ 0.05
VSTM1-203ENST00000376626 PPRC1Q5VV67 1664 aaKnown RBP15.34■□□□□ 0.05
VSTM1-203ENST00000376626 VPS8Q8N3P4 1428 aa15.33■□□□□ 0.04
VSTM1-203ENST00000376626 TROQ12816 1431 aaPredicted RBP15.31■□□□□ 0.04
VSTM1-203ENST00000376626 KIF14Q15058 1648 aa15.31■□□□□ 0.04
VSTM1-203ENST00000376626 KDM6BO15054 1643 aa15.3■□□□□ 0.04
VSTM1-203ENST00000376626 MAGI3Q5TCQ9 1506 aa15.29■□□□□ 0.04
VSTM1-203ENST00000376626 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.29■□□□□ 0.04
VSTM1-203ENST00000376626 TTC37Q6PGP7 1564 aa15.28■□□□□ 0.04
VSTM1-203ENST00000376626 MTUS2Q5JR59 1369 aa15.27■□□□□ 0.04
VSTM1-203ENST00000376626 MYO5CQ9NQX4 1742 aa15.25■□□□□ 0.03
VSTM1-203ENST00000376626 APLP2Q06481 763 aa15.24■□□□□ 0.03
VSTM1-203ENST00000376626 TIAM1Q13009 1591 aa15.22■□□□□ 0.03
VSTM1-203ENST00000376626 CFAP74Q9C0B2 1584 aa15.22■□□□□ 0.03
VSTM1-203ENST00000376626 PPARGC1BQ86YN6 1023 aaKnown RBP15.21■□□□□ 0.03
VSTM1-203ENST00000376626 EHBP1L1Q8N3D4 1523 aa15.21■□□□□ 0.03
VSTM1-203ENST00000376626 FANCAO15360 1455 aa15.2■□□□□ 0.02
VSTM1-203ENST00000376626 NEO1Q92859 1461 aa15.2■□□□□ 0.02
VSTM1-203ENST00000376626 PHLDB1Q86UU1 1377 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms